RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 MYH10P35580 1976 aa14.82□□□□□ -0.04
UPF1-205ENST00000598209 MYBPHLA2RUH7 354 aa14.81□□□□□ -0.04
UPF1-205ENST00000598209 ZNF197O14709 1029 aa14.81□□□□□ -0.04
UPF1-205ENST00000598209 STX10O60499 249 aa14.81□□□□□ -0.04
UPF1-205ENST00000598209 ASS1P00966 412 aaKnown RBP14.81□□□□□ -0.04
UPF1-205ENST00000598209 MYL4P12829 197 aa14.81□□□□□ -0.04
UPF1-205ENST00000598209 P4HA1P13674 534 aa14.81□□□□□ -0.04
UPF1-205ENST00000598209 ATF6P18850 670 aa14.81□□□□□ -0.04
UPF1-205ENST00000598209 RAP1GAPP47736 663 aa14.81□□□□□ -0.04
UPF1-205ENST00000598209 CDH8P55286 799 aa14.81□□□□□ -0.04
UPF1-205ENST00000598209 DCAF17Q5H9S7 520 aaPredicted RBP14.81□□□□□ -0.04
UPF1-205ENST00000598209 CYP4A22Q5TCH4 519 aa14.81□□□□□ -0.04
UPF1-205ENST00000598209 TCERG1LQ5VWI1 586 aa14.81□□□□□ -0.04
UPF1-205ENST00000598209 KRT39Q6A163 491 aa14.81□□□□□ -0.04
UPF1-205ENST00000598209 SPOPLQ6IQ16 392 aa14.81□□□□□ -0.04
UPF1-205ENST00000598209 FAM171BQ6P995 826 aa14.81□□□□□ -0.04
UPF1-205ENST00000598209 PDZD4Q76G19 769 aaPredicted RBP14.81□□□□□ -0.04
UPF1-205ENST00000598209 FILIP1Q7Z7B0 1213 aa14.81□□□□□ -0.04
UPF1-205ENST00000598209 SPATA2LQ8IUW3 424 aaPredicted RBP14.81□□□□□ -0.04
UPF1-205ENST00000598209 NPAS3Q8IXF0 933 aa14.81□□□□□ -0.04
UPF1-205ENST00000598209 LEMD2Q8NC56 503 aa14.81□□□□□ -0.04
UPF1-205ENST00000598209 FAM200AQ8TCP9 573 aa14.81□□□□□ -0.04
UPF1-205ENST00000598209 TAS1R2Q8TE23 839 aa14.81□□□□□ -0.04
UPF1-205ENST00000598209 TCEAL4Q96EI5 215 aa14.81□□□□□ -0.04
UPF1-205ENST00000598209 LPIN3Q9BQK8 851 aa14.81□□□□□ -0.04
UPF1-205ENST00000598209 C1QTNF1Q9BXJ1 281 aa14.81□□□□□ -0.04
UPF1-205ENST00000598209 IMPG2Q9BZV3 1241 aa14.81□□□□□ -0.04
UPF1-205ENST00000598209 ABCB6Q9NP58 842 aa14.81□□□□□ -0.04
UPF1-205ENST00000598209 CRTAC1Q9NQ79 661 aa14.81□□□□□ -0.04
UPF1-205ENST00000598209 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.81□□□□□ -0.04
UPF1-205ENST00000598209 ASAH2Q9NR71 780 aa14.81□□□□□ -0.04
UPF1-205ENST00000598209 ARMCX3Q9UH62 379 aaPredicted RBP14.81□□□□□ -0.04
UPF1-205ENST00000598209 SORCS3Q9UPU3 1222 aa14.81□□□□□ -0.04
UPF1-205ENST00000598209 ASB3Q9Y575 518 aa14.81□□□□□ -0.04
UPF1-205ENST00000598209 OBSL1O75147 1896 aa14.8□□□□□ -0.04
UPF1-205ENST00000598209 TECTAO75443 2155 aa14.8□□□□□ -0.04
UPF1-205ENST00000598209 CEBPBP17676 345 aa14.8□□□□□ -0.04
UPF1-205ENST00000598209 CCR2P41597 374 aa14.8□□□□□ -0.04
UPF1-205ENST00000598209 MXI1P50539 228 aa14.8□□□□□ -0.04
UPF1-205ENST00000598209 EPHA5P54756 1037 aa14.8□□□□□ -0.04
UPF1-205ENST00000598209 ZXDAP98168 799 aa14.8□□□□□ -0.04
UPF1-205ENST00000598209 VEPH1Q14D04 833 aa14.8□□□□□ -0.04
UPF1-205ENST00000598209 CCDC40Q4G0X9 1142 aa14.8□□□□□ -0.04
UPF1-205ENST00000598209 DNAJB7Q7Z6W7 309 aaPredicted RBP14.8□□□□□ -0.04
UPF1-205ENST00000598209 ITIH5Q86UX2 942 aa14.8□□□□□ -0.04
UPF1-205ENST00000598209 GIPC2Q8TF65 315 aa14.8□□□□□ -0.04
UPF1-205ENST00000598209 EDAQ92838 391 aa14.8□□□□□ -0.04
UPF1-205ENST00000598209 PSMG2Q969U7 264 aa14.8□□□□□ -0.04
UPF1-205ENST00000598209 MYLPFQ96A32 169 aa14.8□□□□□ -0.04
UPF1-205ENST00000598209 LRRC3Q9BY71 257 aa14.8□□□□□ -0.04
UPF1-205ENST00000598209 SDCBP2Q9H190 292 aa14.8□□□□□ -0.04
UPF1-205ENST00000598209 KCNK12Q9HB15 430 aa14.8□□□□□ -0.04
UPF1-205ENST00000598209 METTL14Q9HCE5 456 aaKnown RBP14.8□□□□□ -0.04
UPF1-205ENST00000598209 IGSF9Q9P2J2 1179 aa14.8□□□□□ -0.04
UPF1-205ENST00000598209 ZNF638Q14966 1978 aaKnown RBP14.8□□□□□ -0.04
UPF1-205ENST00000598209 FAM86C2PA6NEL3 165 aa14.79□□□□□ -0.04
UPF1-205ENST00000598209 A8MXQ7 604 aa14.79□□□□□ -0.04
UPF1-205ENST00000598209 NRG2O14511 850 aaPredicted RBP14.79□□□□□ -0.04
UPF1-205ENST00000598209 MICAL2O94851 1124 aa14.79□□□□□ -0.04
UPF1-205ENST00000598209 CYP2F1P24903 491 aa14.79□□□□□ -0.04
UPF1-205ENST00000598209 ASPAP45381 313 aa14.79□□□□□ -0.04
UPF1-205ENST00000598209 GPR15P49685 360 aa14.79□□□□□ -0.04
UPF1-205ENST00000598209 NOP14P78316 857 aaKnown RBP14.79□□□□□ -0.04
UPF1-205ENST00000598209 MTMR3Q13615 1198 aa14.79□□□□□ -0.04
UPF1-205ENST00000598209 MAPRE1Q15691 268 aaKnown RBP14.79□□□□□ -0.04
UPF1-205ENST00000598209 CFAP221Q4G0U5 840 aa14.79□□□□□ -0.04
UPF1-205ENST00000598209 MDH1BQ5I0G3 518 aa14.79□□□□□ -0.04
UPF1-205ENST00000598209 C4orf50Q6ZRC1 276 aa14.79□□□□□ -0.04
UPF1-205ENST00000598209 FRMD5Q7Z6J6 570 aa14.79□□□□□ -0.04
UPF1-205ENST00000598209 TMC8Q8IU68 726 aa14.79□□□□□ -0.04
UPF1-205ENST00000598209 CCDC150Q8NCX0 1101 aa14.79□□□□□ -0.04
UPF1-205ENST00000598209 ST13P5Q8NFI4 369 aaPredicted RBP14.79□□□□□ -0.04
UPF1-205ENST00000598209 MYCBPAPQ8TBZ2 947 aa14.79□□□□□ -0.04
UPF1-205ENST00000598209 GPT2Q8TD30 523 aa14.79□□□□□ -0.04
UPF1-205ENST00000598209 RSAD2Q8WXG1 361 aa14.79□□□□□ -0.04
UPF1-205ENST00000598209 SEMA4DQ92854 862 aa14.79□□□□□ -0.04
UPF1-205ENST00000598209 MCRS1Q96EZ8 462 aa14.79□□□□□ -0.04
UPF1-205ENST00000598209 FUBP3Q96I24 572 aaKnown RBP eCLIP14.79□□□□□ -0.04
UPF1-205ENST00000598209 SMOC2Q9H3U7 446 aa14.79□□□□□ -0.04
UPF1-205ENST00000598209 DPEP3Q9H4B8 488 aa14.79□□□□□ -0.04
UPF1-205ENST00000598209 APOBEC3GQ9HC16 384 aaKnown RBP14.79□□□□□ -0.04
UPF1-205ENST00000598209 ZNF334Q9HCZ1 680 aaPredicted RBP14.79□□□□□ -0.04
UPF1-205ENST00000598209 C11orf16Q9NQ32 467 aa14.79□□□□□ -0.04
UPF1-205ENST00000598209 MAGEC2Q9UBF1 373 aaPredicted RBP14.79□□□□□ -0.04
UPF1-205ENST00000598209 ANHXE9PGG2 379 aa14.78□□□□□ -0.04
UPF1-205ENST00000598209 LRRN2O75325 713 aa14.78□□□□□ -0.04
UPF1-205ENST00000598209 MOSPD3O75425 235 aa14.78□□□□□ -0.04
UPF1-205ENST00000598209 GJA1P17302 382 aa14.78□□□□□ -0.04
UPF1-205ENST00000598209 PTPN1P18031 435 aaKnown RBP14.78□□□□□ -0.04
UPF1-205ENST00000598209 RPL10AP62906 217 aaKnown RBP14.78□□□□□ -0.04
UPF1-205ENST00000598209 CYP27A1Q02318 531 aa14.78□□□□□ -0.04
UPF1-205ENST00000598209 TDGQ13569 410 aa14.78□□□□□ -0.04
UPF1-205ENST00000598209 HTR4Q13639 388 aa14.78□□□□□ -0.04
UPF1-205ENST00000598209 TAF12Q16514 161 aa14.78□□□□□ -0.04
UPF1-205ENST00000598209 CBWD6Q4V339 395 aa14.78□□□□□ -0.04
UPF1-205ENST00000598209 CBWD3Q5JTY5 395 aa14.78□□□□□ -0.04
UPF1-205ENST00000598209 CBWD5Q5RIA9 395 aa14.78□□□□□ -0.04
UPF1-205ENST00000598209 SDHAF4Q5VUM1 108 aa14.78□□□□□ -0.04
UPF1-205ENST00000598209 POTEHQ6S545 545 aa14.78□□□□□ -0.04
UPF1-205ENST00000598209 UBALD2Q8IYN6 164 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms