RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 MTMR9Q96QG7 549 aa16.81■□□□□ 0.28
LIG1-214ENST00000597146 FNBP1Q96RU3 617 aa16.81■□□□□ 0.28
LIG1-214ENST00000597146 GTPBP2Q9BX10 602 aaKnown RBP16.81■□□□□ 0.28
LIG1-214ENST00000597146 OXCT2Q9BYC2 517 aaPredicted RBP16.81■□□□□ 0.28
LIG1-214ENST00000597146 MRPL4Q9BYD3 311 aaKnown RBP16.81■□□□□ 0.28
LIG1-214ENST00000597146 TMEM60Q9H2L4 133 aa16.81■□□□□ 0.28
LIG1-214ENST00000597146 CCDC86Q9H6F5 360 aaKnown RBP16.81■□□□□ 0.28
LIG1-214ENST00000597146 ECT2Q9H8V3 914 aa16.81■□□□□ 0.28
LIG1-214ENST00000597146 RAXQ9Y2V3 346 aa16.81■□□□□ 0.28
LIG1-214ENST00000597146 CYSRT1A8MQ03 144 aa16.8■□□□□ 0.28
LIG1-214ENST00000597146 PPEF2O14830 753 aa16.8■□□□□ 0.28
LIG1-214ENST00000597146 CFIP05156 583 aa16.8■□□□□ 0.28
LIG1-214ENST00000597146 HNRNPLP14866 589 aaKnown RBP eCLIP16.8■□□□□ 0.28
LIG1-214ENST00000597146 PROZP22891 400 aa16.8■□□□□ 0.28
LIG1-214ENST00000597146 RDXP35241 583 aaKnown RBP16.8■□□□□ 0.28
LIG1-214ENST00000597146 AARSP49588 968 aaKnown RBP eCLIP16.8■□□□□ 0.28
LIG1-214ENST00000597146 GUCY2FP51841 1108 aa16.8■□□□□ 0.28
LIG1-214ENST00000597146 GNL2Q13823 731 aaKnown RBP16.8■□□□□ 0.28
LIG1-214ENST00000597146 MYBPC2Q14324 1141 aa16.8■□□□□ 0.28
LIG1-214ENST00000597146 ZNF423Q2M1K9 1284 aa16.8■□□□□ 0.28
LIG1-214ENST00000597146 MGAT5BQ3V5L5 792 aa16.8■□□□□ 0.28
LIG1-214ENST00000597146 C8orf34Q49A92 452 aa16.8■□□□□ 0.28
LIG1-214ENST00000597146 C2orf27AQ580R0 203 aa16.8■□□□□ 0.28
LIG1-214ENST00000597146 TXNDC8Q6A555 127 aa16.8■□□□□ 0.28
LIG1-214ENST00000597146 MPZL3Q6UWV2 235 aa16.8■□□□□ 0.28
LIG1-214ENST00000597146 DSTYKQ6XUX3 929 aa16.8■□□□□ 0.28
LIG1-214ENST00000597146 LPCAT2Q7L5N7 544 aa16.8■□□□□ 0.28
LIG1-214ENST00000597146 SYT12Q8IV01 421 aa16.8■□□□□ 0.28
LIG1-214ENST00000597146 CCDC83Q8IWF9 413 aa16.8■□□□□ 0.28
LIG1-214ENST00000597146 HDDC3Q8N4P3 179 aa16.8■□□□□ 0.28
LIG1-214ENST00000597146 CPA6Q8N4T0 437 aa16.8■□□□□ 0.28
LIG1-214ENST00000597146 CCDC33Q8N5R6 958 aa16.8■□□□□ 0.28
LIG1-214ENST00000597146 STKLD1Q8NE28 680 aa16.8■□□□□ 0.28
LIG1-214ENST00000597146 TTC16Q8NEE8 873 aa16.8■□□□□ 0.28
LIG1-214ENST00000597146 OR10T2Q8NGX3 314 aa16.8■□□□□ 0.28
LIG1-214ENST00000597146 OLIG1Q8TAK6 271 aa16.8■□□□□ 0.28
LIG1-214ENST00000597146 USP33Q8TEY7 942 aa16.8■□□□□ 0.28
LIG1-214ENST00000597146 ZBTB45Q96K62 511 aaPredicted RBP16.8■□□□□ 0.28
LIG1-214ENST00000597146 TCHPQ9BT92 498 aa16.8■□□□□ 0.28
LIG1-214ENST00000597146 TDP1Q9NUW8 608 aa16.8■□□□□ 0.28
LIG1-214ENST00000597146 SCN1AP35498 2009 aa16.8■□□□□ 0.28
LIG1-214ENST00000597146 URB1O60287 2271 aaKnown RBP16.79■□□□□ 0.28
LIG1-214ENST00000597146 CCDC169A6NNP5 214 aa16.79■□□□□ 0.28
LIG1-214ENST00000597146 TNFRSF10BO14763 440 aa16.79■□□□□ 0.28
LIG1-214ENST00000597146 PRB1P04280 392 aa16.79■□□□□ 0.28
LIG1-214ENST00000597146 CXCL8P10145 99 aa16.79■□□□□ 0.28
LIG1-214ENST00000597146 LRPAP1P30533 357 aa16.79■□□□□ 0.28
LIG1-214ENST00000597146 PEX3P56589 373 aa16.79■□□□□ 0.28
LIG1-214ENST00000597146 MTF1Q14872 753 aa16.79■□□□□ 0.28
LIG1-214ENST00000597146 PDGFRLQ15198 375 aa16.79■□□□□ 0.28
LIG1-214ENST00000597146 TAF12Q16514 161 aa16.79■□□□□ 0.28
LIG1-214ENST00000597146 SLC39A12Q504Y0 691 aa16.79■□□□□ 0.28
LIG1-214ENST00000597146 SLC23A3Q6PIS1 610 aa16.79■□□□□ 0.28
LIG1-214ENST00000597146 NSUN7Q8NE18 718 aaKnown RBP16.79■□□□□ 0.28
LIG1-214ENST00000597146 KIFAP3Q92845 792 aa16.79■□□□□ 0.28
LIG1-214ENST00000597146 CRELD1Q96HD1 420 aa16.79■□□□□ 0.28
LIG1-214ENST00000597146 CAMK1GQ96NX5 476 aa16.79■□□□□ 0.28
LIG1-214ENST00000597146 KIF9Q9HAQ2 790 aa16.79■□□□□ 0.28
LIG1-214ENST00000597146 CACNA2D2Q9NY47 1150 aa16.79■□□□□ 0.28
LIG1-214ENST00000597146 DAXXQ9UER7 740 aaPredicted RBP16.79■□□□□ 0.28
LIG1-214ENST00000597146 WNT6Q9Y6F9 365 aa16.79■□□□□ 0.28
LIG1-214ENST00000597146 JAK2O60674 1132 aa16.78■□□□□ 0.28
LIG1-214ENST00000597146 FDPSP14324 419 aaKnown RBP16.78■□□□□ 0.28
LIG1-214ENST00000597146 ITPKAP23677 461 aa16.78■□□□□ 0.28
LIG1-214ENST00000597146 P2RY2P41231 377 aa16.78■□□□□ 0.28
LIG1-214ENST00000597146 NPTX2P47972 431 aa16.78■□□□□ 0.28
LIG1-214ENST00000597146 ATXN3P54252 364 aaPredicted RBP16.78■□□□□ 0.28
LIG1-214ENST00000597146 NLRP12P59046 1061 aa16.78■□□□□ 0.28
LIG1-214ENST00000597146 LYSMD4Q5XG99 296 aa16.78■□□□□ 0.28
LIG1-214ENST00000597146 PNPLA1Q8N8W4 532 aa16.78■□□□□ 0.28
LIG1-214ENST00000597146 GLIS3Q8NEA6 775 aa16.78■□□□□ 0.28
LIG1-214ENST00000597146 EXOC4Q96A65 974 aa16.78■□□□□ 0.28
LIG1-214ENST00000597146 DUS2Q9NX74 493 aaKnown RBP16.78■□□□□ 0.28
LIG1-214ENST00000597146 HSFX1Q9UBD0 423 aa16.78■□□□□ 0.28
LIG1-214ENST00000597146 MAP3K13O43283 966 aa16.77■□□□□ 0.28
LIG1-214ENST00000597146 OPHN1O60890 802 aa16.77■□□□□ 0.28
LIG1-214ENST00000597146 F11P03951 625 aa16.77■□□□□ 0.28
LIG1-214ENST00000597146 CD59P13987 128 aa16.77■□□□□ 0.28
LIG1-214ENST00000597146 TYMPP19971 482 aa16.77■□□□□ 0.28
LIG1-214ENST00000597146 RABEP1Q15276 862 aa16.77■□□□□ 0.28
LIG1-214ENST00000597146 CRY1Q16526 586 aa16.77■□□□□ 0.28
LIG1-214ENST00000597146 ARMCX5Q6P1M9 558 aa16.77■□□□□ 0.28
LIG1-214ENST00000597146 TMEM92Q6UXU6 159 aa16.77■□□□□ 0.28
LIG1-214ENST00000597146 MINDY1Q8N5J2 469 aa16.77■□□□□ 0.28
LIG1-214ENST00000597146 C8orf76Q96K31 380 aa16.77■□□□□ 0.28
LIG1-214ENST00000597146 LLPHQ9BRT6 129 aaKnown RBP16.77■□□□□ 0.28
LIG1-214ENST00000597146 BHMT2Q9H2M3 363 aa16.77■□□□□ 0.28
LIG1-214ENST00000597146 ARHGAP28Q9P2N2 729 aa16.77■□□□□ 0.28
LIG1-214ENST00000597146 PILRBQ9UKJ0 227 aa16.77■□□□□ 0.28
LIG1-214ENST00000597146 MMP17Q9ULZ9 603 aa16.77■□□□□ 0.28
LIG1-214ENST00000597146 ZNF462Q96JM2 2506 aa16.76■□□□□ 0.27
LIG1-214ENST00000597146 K7EQS6 105 aa16.76■□□□□ 0.27
LIG1-214ENST00000597146 FTH1P19P0C7X4 201 aa16.76■□□□□ 0.27
LIG1-214ENST00000597146 RPA1P27694 616 aa16.76■□□□□ 0.27
LIG1-214ENST00000597146 IFNAR2P48551 515 aa16.76■□□□□ 0.27
LIG1-214ENST00000597146 TUFMP49411 452 aaKnown RBP16.76■□□□□ 0.27
LIG1-214ENST00000597146 GUCY1B3Q02153 619 aa16.76■□□□□ 0.27
LIG1-214ENST00000597146 DMP1Q13316 513 aaPredicted RBP16.76■□□□□ 0.27
LIG1-214ENST00000597146 NOLC1Q14978 699 aaKnown RBP eCLIP16.76■□□□□ 0.278e-7■■■□□ 15.4
LIG1-214ENST00000597146 ZNF77Q15935 545 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms