RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 CXorf38Q8TB03 319 aa17.32■□□□□ 0.36
LIM2-202ENST00000596399 C2orf15Q8WU43 125 aaKnown RBP17.32■□□□□ 0.36
LIM2-202ENST00000596399 USP13Q92995 863 aaPredicted RBP17.32■□□□□ 0.36
LIM2-202ENST00000596399 HVCN1Q96D96 273 aa17.32■□□□□ 0.36
LIM2-202ENST00000596399 GCNAQ96QF7 691 aa17.32■□□□□ 0.36
LIM2-202ENST00000596399 EBF3Q9H4W6 596 aa17.32■□□□□ 0.36
LIM2-202ENST00000596399 HPS4Q9NQG7 708 aa17.32■□□□□ 0.36
LIM2-202ENST00000596399 FOXD4L1Q9NU39 408 aa17.32■□□□□ 0.36
LIM2-202ENST00000596399 PCDHB5Q9Y5E4 795 aa17.32■□□□□ 0.36
LIM2-202ENST00000596399 EXTL3O43909 919 aa17.31■□□□□ 0.36
LIM2-202ENST00000596399 PRPF40AO75400 957 aaKnown RBP17.31■□□□□ 0.36
LIM2-202ENST00000596399 WEE1P30291 646 aa17.31■□□□□ 0.36
LIM2-202ENST00000596399 PXNP49023 591 aaPredicted RBP17.31■□□□□ 0.36
LIM2-202ENST00000596399 BFSP1Q12934 665 aa17.31■□□□□ 0.36
LIM2-202ENST00000596399 POSTNQ15063 836 aa17.31■□□□□ 0.36
LIM2-202ENST00000596399 ITPRIPL2Q3MIP1 535 aa17.31■□□□□ 0.36
LIM2-202ENST00000596399 NAIF1Q69YI7 327 aaPredicted RBP17.31■□□□□ 0.36
LIM2-202ENST00000596399 LAIR1Q6GTX8 287 aa17.31■□□□□ 0.36
LIM2-202ENST00000596399 BRSK2Q8IWQ3 736 aa17.31■□□□□ 0.36
LIM2-202ENST00000596399 CSGALNACT2Q8N6G5 542 aa17.31■□□□□ 0.36
LIM2-202ENST00000596399 GPR161Q8N6U8 529 aaKnown RBP17.31■□□□□ 0.36
LIM2-202ENST00000596399 HPS3Q969F9 1004 aa17.31■□□□□ 0.36
LIM2-202ENST00000596399 MSANTD3Q96H12 275 aa17.31■□□□□ 0.36
LIM2-202ENST00000596399 ZNF560Q96MR9 790 aa17.31■□□□□ 0.36
LIM2-202ENST00000596399 FAM83CQ9BQN1 747 aa17.31■□□□□ 0.36
LIM2-202ENST00000596399 PDE11AQ9HCR9 933 aa17.31■□□□□ 0.36
LIM2-202ENST00000596399 DDX43Q9NXZ2 648 aaKnown RBP17.31■□□□□ 0.36
LIM2-202ENST00000596399 RBAKQ9NYW8 714 aaPredicted RBP17.31■□□□□ 0.36
LIM2-202ENST00000596399 SEL1LQ9UBV2 794 aa17.31■□□□□ 0.36
LIM2-202ENST00000596399 SIX4Q9UIU6 781 aa17.31■□□□□ 0.36
LIM2-202ENST00000596399 GTF3C4Q9UKN8 822 aa17.31■□□□□ 0.36
LIM2-202ENST00000596399 RAB23Q9ULC3 237 aa17.31■□□□□ 0.36
LIM2-202ENST00000596399 TADA3O75528 432 aa17.3■□□□□ 0.36
LIM2-202ENST00000596399 PRPF6O94906 941 aaKnown RBP17.3■□□□□ 0.36
LIM2-202ENST00000596399 CENPBP07199 599 aaPredicted RBP17.3■□□□□ 0.36
LIM2-202ENST00000596399 KRT19P08727 400 aa17.3■□□□□ 0.36
LIM2-202ENST00000596399 ARSAP15289 507 aa17.3■□□□□ 0.36
LIM2-202ENST00000596399 GAP43P17677 238 aa17.3■□□□□ 0.36
LIM2-202ENST00000596399 POU5F1Q01860 360 aaKnown RBP17.3■□□□□ 0.36
LIM2-202ENST00000596399 LMNB2Q03252 620 aa17.3■□□□□ 0.36
LIM2-202ENST00000596399 DGKKQ5KSL6 1271 aa17.3■□□□□ 0.36
LIM2-202ENST00000596399 LONP2Q86WA8 852 aa17.3■□□□□ 0.36
LIM2-202ENST00000596399 SYCP3Q8IZU3 236 aa17.3■□□□□ 0.36
LIM2-202ENST00000596399 PDILTQ8N807 584 aa17.3■□□□□ 0.36
LIM2-202ENST00000596399 TTC16Q8NEE8 873 aa17.3■□□□□ 0.36
LIM2-202ENST00000596399 USP28Q96RU2 1077 aa17.3■□□□□ 0.36
LIM2-202ENST00000596399 CYP2S1Q96SQ9 504 aa17.3■□□□□ 0.36
LIM2-202ENST00000596399 PKMYT1Q99640 499 aa17.3■□□□□ 0.36
LIM2-202ENST00000596399 FBRSL1Q9HCM7 1045 aaKnown RBP17.3■□□□□ 0.36
LIM2-202ENST00000596399 THG1LQ9NWX6 298 aaKnown RBP17.3■□□□□ 0.36
LIM2-202ENST00000596399 CDV3Q9UKY7 258 aaKnown RBP17.3■□□□□ 0.36
LIM2-202ENST00000596399 EXOC7Q9UPT5 735 aa17.3■□□□□ 0.36
LIM2-202ENST00000596399 OBSL1O75147 1896 aa17.29■□□□□ 0.36
LIM2-202ENST00000596399 PTPRJQ12913 1337 aa17.29■□□□□ 0.36
LIM2-202ENST00000596399 FRMD3A2A2Y4 597 aa17.29■□□□□ 0.36
LIM2-202ENST00000596399 PAPSS2O95340 614 aaPredicted RBP17.29■□□□□ 0.36
LIM2-202ENST00000596399 AVPR1AP37288 418 aa17.29■□□□□ 0.36
LIM2-202ENST00000596399 STAT6P42226 847 aa17.29■□□□□ 0.36
LIM2-202ENST00000596399 PLCB2Q00722 1185 aa17.29■□□□□ 0.36
LIM2-202ENST00000596399 TSPY1Q01534 308 aa17.29■□□□□ 0.36
LIM2-202ENST00000596399 SMARCB1Q12824 385 aa17.29■□□□□ 0.36
LIM2-202ENST00000596399 RUNX3Q13761 415 aa17.29■□□□□ 0.36
LIM2-202ENST00000596399 FSTL4Q6MZW2 842 aa17.29■□□□□ 0.36
LIM2-202ENST00000596399 C1orf228Q6PIY5 440 aa17.29■□□□□ 0.36
LIM2-202ENST00000596399 NT5DC4Q86YG4 428 aa17.29■□□□□ 0.36
LIM2-202ENST00000596399 SLC22A12Q96S37 553 aa17.29■□□□□ 0.36
LIM2-202ENST00000596399 MTMR12Q9C0I1 747 aa17.29■□□□□ 0.36
LIM2-202ENST00000596399 OLFML3Q9NRN5 406 aa17.29■□□□□ 0.36
LIM2-202ENST00000596399 PANK4Q9NVE7 773 aa17.29■□□□□ 0.36
LIM2-202ENST00000596399 PCDHB13Q9Y5F0 798 aa17.29■□□□□ 0.36
LIM2-202ENST00000596399 SNX9Q9Y5X1 595 aa17.29■□□□□ 0.36
LIM2-202ENST00000596399 DENND4CQ5VZ89 1909 aa17.28■□□□□ 0.36
LIM2-202ENST00000596399 PRR5-ARHGAP8B1AHC4 643 aa17.28■□□□□ 0.36
LIM2-202ENST00000596399 GDF9O60383 454 aa17.28■□□□□ 0.36
LIM2-202ENST00000596399 HUS1O60921 280 aa17.28■□□□□ 0.36
LIM2-202ENST00000596399 ATP2C2O75185 946 aa17.28■□□□□ 0.36
LIM2-202ENST00000596399 RETP07949 1114 aa17.28■□□□□ 0.36
LIM2-202ENST00000596399 PDCP20941 246 aa17.28■□□□□ 0.36
LIM2-202ENST00000596399 GARTP22102 1010 aa17.28■□□□□ 0.36
LIM2-202ENST00000596399 TXLNAP40222 546 aa17.28■□□□□ 0.36
LIM2-202ENST00000596399 PNPLA4P41247 253 aa17.28■□□□□ 0.36
LIM2-202ENST00000596399 ARHGAP8P85298 464 aa17.28■□□□□ 0.36
LIM2-202ENST00000596399 INTS6LQ5JSJ4 861 aaKnown RBP17.28■□□□□ 0.36
LIM2-202ENST00000596399 OR5B17Q8NGF7 314 aa17.28■□□□□ 0.36
LIM2-202ENST00000596399 ACBD6Q9BR61 282 aa17.28■□□□□ 0.36
LIM2-202ENST00000596399 SEMA4GQ9NTN9 838 aa17.28■□□□□ 0.36
LIM2-202ENST00000596399 TDP1Q9NUW8 608 aa17.28■□□□□ 0.36
LIM2-202ENST00000596399 MTMR6Q9Y217 621 aa17.28■□□□□ 0.36
LIM2-202ENST00000596399 SPTBN2O15020 2390 aa17.27■□□□□ 0.36
LIM2-202ENST00000596399 EGFP01133 1207 aa17.27■□□□□ 0.36
LIM2-202ENST00000596399 SLC39A14Q15043 492 aa17.27■□□□□ 0.36
LIM2-202ENST00000596399 CCDC6Q16204 474 aa17.27■□□□□ 0.36
LIM2-202ENST00000596399 NFE2Q16621 373 aaPredicted RBP17.27■□□□□ 0.36
LIM2-202ENST00000596399 SOWAHAQ2M3V2 549 aa17.27■□□□□ 0.36
LIM2-202ENST00000596399 TMEM196Q5HYL7 178 aa17.27■□□□□ 0.36
LIM2-202ENST00000596399 CCDC73Q6ZRK6 1079 aa17.27■□□□□ 0.36
LIM2-202ENST00000596399 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.27■□□□□ 0.36
LIM2-202ENST00000596399 MON1AQ86VX9 555 aa17.27■□□□□ 0.36
LIM2-202ENST00000596399 FAM160A2Q8N612 972 aaPredicted RBP17.27■□□□□ 0.36
LIM2-202ENST00000596399 CACTINQ8WUQ7 758 aaKnown RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms