RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 ARPP19P56211 112 aa11.28□□□□□ -0.6
LIG1-210ENST00000596332 CREMQ03060 361 aa11.28□□□□□ -0.6
LIG1-210ENST00000596332 ADCY1Q08828 1119 aa11.28□□□□□ -0.6
LIG1-210ENST00000596332 SYCP1Q15431 976 aa11.28□□□□□ -0.6
LIG1-210ENST00000596332 SLC39A12Q504Y0 691 aa11.28□□□□□ -0.6
LIG1-210ENST00000596332 WDR44Q5JSH3 913 aa11.28□□□□□ -0.6
LIG1-210ENST00000596332 TPGS2Q68CL5 300 aa11.28□□□□□ -0.6
LIG1-210ENST00000596332 ANKRD54Q6NXT1 300 aa11.28□□□□□ -0.6
LIG1-210ENST00000596332 LLGL2Q6P1M3 1020 aa11.28□□□□□ -0.6
LIG1-210ENST00000596332 ACOT1Q86TX2 421 aa11.28□□□□□ -0.6
LIG1-210ENST00000596332 METTL23Q86XA0 190 aa11.28□□□□□ -0.6
LIG1-210ENST00000596332 FUKQ8N0W3 1084 aa11.28□□□□□ -0.6
LIG1-210ENST00000596332 THEM5Q8N1Q8 247 aa11.28□□□□□ -0.6
LIG1-210ENST00000596332 MICALL1Q8N3F8 863 aa11.28□□□□□ -0.6
LIG1-210ENST00000596332 KREMEN2Q8NCW0 462 aa11.28□□□□□ -0.6
LIG1-210ENST00000596332 MAFAQ8NHW3 353 aaPredicted RBP11.28□□□□□ -0.6
LIG1-210ENST00000596332 MYCBPAPQ8TBZ2 947 aa11.28□□□□□ -0.6
LIG1-210ENST00000596332 HDAC7Q8WUI4 952 aa11.28□□□□□ -0.6
LIG1-210ENST00000596332 TFAP2BQ92481 460 aa11.28□□□□□ -0.6
LIG1-210ENST00000596332 SHC3Q92529 594 aa11.28□□□□□ -0.6
LIG1-210ENST00000596332 PCED1BQ96HM7 432 aa11.28□□□□□ -0.6
LIG1-210ENST00000596332 NT5C1BQ96P26 610 aa11.28□□□□□ -0.6
LIG1-210ENST00000596332 LRRC3Q9BY71 257 aa11.28□□□□□ -0.6
LIG1-210ENST00000596332 TTYH3Q9C0H2 523 aa11.28□□□□□ -0.6
LIG1-210ENST00000596332 FAM124BQ9H5Z6 455 aaPredicted RBP11.28□□□□□ -0.6
LIG1-210ENST00000596332 UBE2TQ9NPD8 197 aaPredicted RBP11.28□□□□□ -0.6
LIG1-210ENST00000596332 ACP6Q9NPH0 428 aa11.28□□□□□ -0.6
LIG1-210ENST00000596332 APEX2Q9UBZ4 518 aa11.28□□□□□ -0.6
LIG1-210ENST00000596332 SLC27A5Q9Y2P5 690 aa11.28□□□□□ -0.6
LIG1-210ENST00000596332 FHOD1Q9Y613 1164 aa11.28□□□□□ -0.6
LIG1-210ENST00000596332 A8MXQ7 604 aa11.27□□□□□ -0.61
LIG1-210ENST00000596332 CLDN5O00501 218 aa11.27□□□□□ -0.61
LIG1-210ENST00000596332 ZMYND10O75800 440 aa11.27□□□□□ -0.61
LIG1-210ENST00000596332 GABBR2O75899 941 aa11.27□□□□□ -0.61
LIG1-210ENST00000596332 SOAT2O75908 522 aa11.27□□□□□ -0.61
LIG1-210ENST00000596332 BEST1O76090 585 aa11.27□□□□□ -0.61
LIG1-210ENST00000596332 GLUD1P00367 558 aa11.27□□□□□ -0.61
LIG1-210ENST00000596332 PNMA6AP0CW24 399 aaPredicted RBP11.27□□□□□ -0.61
LIG1-210ENST00000596332 HAPLN1P10915 354 aaPredicted RBP11.27□□□□□ -0.61
LIG1-210ENST00000596332 UCHL3P15374 230 aa11.27□□□□□ -0.61
LIG1-210ENST00000596332 ATF6P18850 670 aa11.27□□□□□ -0.61
LIG1-210ENST00000596332 CD58P19256 250 aa11.27□□□□□ -0.61
LIG1-210ENST00000596332 CYP2F1P24903 491 aa11.27□□□□□ -0.61
LIG1-210ENST00000596332 CLCN1P35523 988 aa11.27□□□□□ -0.61
LIG1-210ENST00000596332 JAM2P57087 298 aa11.27□□□□□ -0.61
LIG1-210ENST00000596332 UBXN1Q04323 297 aa11.27□□□□□ -0.61
LIG1-210ENST00000596332 DUSP4Q13115 394 aa11.27□□□□□ -0.61
LIG1-210ENST00000596332 PKDCCQ504Y2 493 aa11.27□□□□□ -0.61
LIG1-210ENST00000596332 PPFIBP1Q86W92 1011 aa11.27□□□□□ -0.61
LIG1-210ENST00000596332 PPM1KQ8N3J5 372 aa11.27□□□□□ -0.61
LIG1-210ENST00000596332 B3GALNT2Q8NCR0 500 aa11.27□□□□□ -0.61
LIG1-210ENST00000596332 ZMIZ2Q8NF64 920 aa11.27□□□□□ -0.61
LIG1-210ENST00000596332 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.27□□□□□ -0.61
LIG1-210ENST00000596332 OLIG1Q8TAK6 271 aa11.27□□□□□ -0.61
LIG1-210ENST00000596332 PPM1EQ8WY54 764 aa11.27□□□□□ -0.61
LIG1-210ENST00000596332 JAKMIP2Q96AA8 810 aa11.27□□□□□ -0.61
LIG1-210ENST00000596332 PGLYRP2Q96PD5 576 aa11.27□□□□□ -0.61
LIG1-210ENST00000596332 LSM14BQ9BX40 385 aaKnown RBP11.27□□□□□ -0.61
LIG1-210ENST00000596332 SNX25Q9H3E2 840 aa11.27□□□□□ -0.61
LIG1-210ENST00000596332 MAN1C1Q9NR34 630 aa11.27□□□□□ -0.61
LIG1-210ENST00000596332 HSFX1Q9UBD0 423 aa11.27□□□□□ -0.61
LIG1-210ENST00000596332 DNAJC12Q9UKB3 198 aa11.27□□□□□ -0.61
LIG1-210ENST00000596332 BRWD1Q9NSI6 2320 aa11.26□□□□□ -0.61
LIG1-210ENST00000596332 A0A1W2PQC6 194 aa11.26□□□□□ -0.61
LIG1-210ENST00000596332 GRXCR2A6NFK2 248 aa11.26□□□□□ -0.61
LIG1-210ENST00000596332 CFHP08603 1231 aa11.26□□□□□ -0.61
LIG1-210ENST00000596332 P4HA1P13674 534 aa11.26□□□□□ -0.61
LIG1-210ENST00000596332 TBXAS1P24557 533 aaPredicted RBP11.26□□□□□ -0.61
LIG1-210ENST00000596332 PCSK1P29120 753 aa11.26□□□□□ -0.61
LIG1-210ENST00000596332 CA8P35219 290 aa11.26□□□□□ -0.61
LIG1-210ENST00000596332 GPR15P49685 360 aa11.26□□□□□ -0.61
LIG1-210ENST00000596332 CETN1Q12798 172 aa11.26□□□□□ -0.61
LIG1-210ENST00000596332 BMS1Q14692 1282 aaKnown RBP11.26□□□□□ -0.61
LIG1-210ENST00000596332 UVSSAQ2YD98 709 aa11.26□□□□□ -0.61
LIG1-210ENST00000596332 CFAP221Q4G0U5 840 aa11.26□□□□□ -0.61
LIG1-210ENST00000596332 ZNF394Q53GI3 561 aa11.26□□□□□ -0.61
LIG1-210ENST00000596332 MDH1BQ5I0G3 518 aa11.26□□□□□ -0.61
LIG1-210ENST00000596332 PPP1R26Q5T8A7 1209 aaPredicted RBP11.26□□□□□ -0.61
LIG1-210ENST00000596332 FAM71AQ8IYT1 594 aa11.26□□□□□ -0.61
LIG1-210ENST00000596332 CMASQ8NFW8 434 aaPredicted RBP11.26□□□□□ -0.61
LIG1-210ENST00000596332 SUSD6Q92537 303 aa11.26□□□□□ -0.61
LIG1-210ENST00000596332 BAP1Q92560 729 aa11.26□□□□□ -0.61
LIG1-210ENST00000596332 MYLPFQ96A32 169 aa11.26□□□□□ -0.61
LIG1-210ENST00000596332 TMEM176AQ96HP8 235 aa11.26□□□□□ -0.61
LIG1-210ENST00000596332 NT5C1AQ9BXI3 368 aa11.26□□□□□ -0.61
LIG1-210ENST00000596332 IMPG2Q9BZV3 1241 aa11.26□□□□□ -0.61
LIG1-210ENST00000596332 ZNF518BQ9C0D4 1074 aa11.26□□□□□ -0.61
LIG1-210ENST00000596332 XPO4Q9C0E2 1151 aaKnown RBP11.26□□□□□ -0.61
LIG1-210ENST00000596332 PLEKHA4Q9H4M7 779 aa11.26□□□□□ -0.61
LIG1-210ENST00000596332 UBE2ZQ9H832 354 aaPredicted RBP11.26□□□□□ -0.61
LIG1-210ENST00000596332 CSNK1G1Q9HCP0 422 aa11.26□□□□□ -0.61
LIG1-210ENST00000596332 CLDND1Q9NY35 253 aa11.26□□□□□ -0.61
LIG1-210ENST00000596332 IFNKQ9P0W0 207 aa11.26□□□□□ -0.61
LIG1-210ENST00000596332 MAFFQ9ULX9 164 aa11.26□□□□□ -0.61
LIG1-210ENST00000596332 R3HCC1Q9Y3T6 440 aaKnown RBP11.26□□□□□ -0.61
LIG1-210ENST00000596332 MTCL1Q9Y4B5 1905 aaKnown RBP11.25□□□□□ -0.61
LIG1-210ENST00000596332 NOTCH4Q99466 2003 aa11.25□□□□□ -0.61
LIG1-210ENST00000596332 HHLA1C9JL84 531 aa11.25□□□□□ -0.61
LIG1-210ENST00000596332 H3BQ06 376 aaPredicted RBP11.25□□□□□ -0.61
LIG1-210ENST00000596332 NCK2O43639 380 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms