RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 PTPN1P18031 435 aaKnown RBP15.32■□□□□ 0.04
LIG1-208ENST00000595758 CD58P19256 250 aa15.32■□□□□ 0.04
LIG1-208ENST00000595758 TUFMP49411 452 aaKnown RBP15.32■□□□□ 0.04
LIG1-208ENST00000595758 ZNF165P49910 485 aa15.32■□□□□ 0.04
LIG1-208ENST00000595758 CBX2Q14781 532 aaPredicted RBP15.32■□□□□ 0.04
LIG1-208ENST00000595758 NCAPHQ15003 741 aa15.32■□□□□ 0.04
LIG1-208ENST00000595758 MAPRE1Q15691 268 aaKnown RBP15.32■□□□□ 0.04
LIG1-208ENST00000595758 SMAD2Q15796 467 aaKnown RBP15.32■□□□□ 0.04
LIG1-208ENST00000595758 VWA3BQ502W6 1294 aa15.32■□□□□ 0.04
LIG1-208ENST00000595758 TJAP1Q5JTD0 557 aa15.32■□□□□ 0.04
LIG1-208ENST00000595758 UNC93AQ86WB7 457 aa15.32■□□□□ 0.04
LIG1-208ENST00000595758 TTC39CQ8N584 583 aa15.32■□□□□ 0.04
LIG1-208ENST00000595758 AOPEPQ8N6M6 819 aa15.32■□□□□ 0.04
LIG1-208ENST00000595758 LMO3Q8TAP4 145 aa15.32■□□□□ 0.04
LIG1-208ENST00000595758 MYCBPAPQ8TBZ2 947 aa15.32■□□□□ 0.04
LIG1-208ENST00000595758 SPPL2BQ8TCT7 592 aa15.32■□□□□ 0.04
LIG1-208ENST00000595758 NT5C1BQ96P26 610 aa15.32■□□□□ 0.04
LIG1-208ENST00000595758 CRISPLD1Q9H336 500 aa15.32■□□□□ 0.04
LIG1-208ENST00000595758 DPEP3Q9H4B8 488 aa15.32■□□□□ 0.04
LIG1-208ENST00000595758 CRTAC1Q9NQ79 661 aa15.32■□□□□ 0.04
LIG1-208ENST00000595758 HSFX1Q9UBD0 423 aa15.32■□□□□ 0.04
LIG1-208ENST00000595758 YIPF1Q9Y548 306 aa15.32■□□□□ 0.04
LIG1-208ENST00000595758 SMTNL1A8MU46 457 aa15.31■□□□□ 0.04
LIG1-208ENST00000595758 POU2F2P09086 479 aa15.31■□□□□ 0.04
LIG1-208ENST00000595758 IL9P15248 144 aa15.31■□□□□ 0.04
LIG1-208ENST00000595758 ALDH1A3P47895 512 aa15.31■□□□□ 0.04
LIG1-208ENST00000595758 NDST1P52848 882 aa15.31■□□□□ 0.04
LIG1-208ENST00000595758 INCA1Q0VD86 236 aa15.31■□□□□ 0.04
LIG1-208ENST00000595758 TWF1Q12792 350 aa15.31■□□□□ 0.04
LIG1-208ENST00000595758 PLD1Q13393 1074 aa15.31■□□□□ 0.04
LIG1-208ENST00000595758 CUL2Q13617 745 aa15.31■□□□□ 0.04
LIG1-208ENST00000595758 CCDC142Q17RM4 750 aa15.31■□□□□ 0.04
LIG1-208ENST00000595758 MGAT5BQ3V5L5 792 aa15.31■□□□□ 0.04
LIG1-208ENST00000595758 MDH1BQ5I0G3 518 aa15.31■□□□□ 0.04
LIG1-208ENST00000595758 GBP6Q6ZN66 633 aa15.31■□□□□ 0.04
LIG1-208ENST00000595758 C4orf50Q6ZRC1 276 aa15.31■□□□□ 0.04
LIG1-208ENST00000595758 SPATA2LQ8IUW3 424 aaPredicted RBP15.31■□□□□ 0.04
LIG1-208ENST00000595758 TTC9BQ8N6N2 239 aa15.31■□□□□ 0.04
LIG1-208ENST00000595758 B3GALNT2Q8NCR0 500 aa15.31■□□□□ 0.04
LIG1-208ENST00000595758 TNIP3Q96KP6 325 aa15.31■□□□□ 0.04
LIG1-208ENST00000595758 SEPT5Q99719 369 aaPredicted RBP15.31■□□□□ 0.04
LIG1-208ENST00000595758 ARID3AQ99856 593 aa15.31■□□□□ 0.04
LIG1-208ENST00000595758 CRACR2AQ9BSW2 395 aa15.31■□□□□ 0.04
LIG1-208ENST00000595758 INTS2Q9H0H0 1204 aaKnown RBP15.31■□□□□ 0.04
LIG1-208ENST00000595758 NDST4Q9H3R1 872 aa15.31■□□□□ 0.04
LIG1-208ENST00000595758 ABCB6Q9NP58 842 aa15.31■□□□□ 0.04
LIG1-208ENST00000595758 TAB2Q9NYJ8 693 aa15.31■□□□□ 0.04
LIG1-208ENST00000595758 GCNT4Q9P109 453 aa15.31■□□□□ 0.04
LIG1-208ENST00000595758 GTPBP10A4D1E9 387 aaKnown RBP15.3■□□□□ 0.04
LIG1-208ENST00000595758 PES1O00541 588 aaKnown RBP15.3■□□□□ 0.04
LIG1-208ENST00000595758 SOAT2O75908 522 aa15.3■□□□□ 0.04
LIG1-208ENST00000595758 HAPLN1P10915 354 aaPredicted RBP15.3■□□□□ 0.04
LIG1-208ENST00000595758 TRIM21P19474 475 aaKnown RBP15.3■□□□□ 0.04
LIG1-208ENST00000595758 CDK11BP21127 795 aaKnown RBP15.3■□□□□ 0.04
LIG1-208ENST00000595758 TBXAS1P24557 533 aaPredicted RBP15.3■□□□□ 0.04
LIG1-208ENST00000595758 CYP2F1P24903 491 aa15.3■□□□□ 0.04
LIG1-208ENST00000595758 EPHB3P54753 998 aa15.3■□□□□ 0.04
LIG1-208ENST00000595758 CYP27A1Q02318 531 aa15.3■□□□□ 0.04
LIG1-208ENST00000595758 MIIPQ5JXC2 388 aa15.3■□□□□ 0.04
LIG1-208ENST00000595758 ACOT1Q86TX2 421 aa15.3■□□□□ 0.04
LIG1-208ENST00000595758 DHX40Q8IX18 779 aaKnown RBP15.3■□□□□ 0.04
LIG1-208ENST00000595758 CRYBG2Q8N1P7 616 aa15.3■□□□□ 0.04
LIG1-208ENST00000595758 ELMOD1Q8N336 334 aa15.3■□□□□ 0.04
LIG1-208ENST00000595758 ANKRD20A12PQ8NF67 263 aa15.3■□□□□ 0.04
LIG1-208ENST00000595758 MYLPFQ96A32 169 aa15.3■□□□□ 0.04
LIG1-208ENST00000595758 FUBP3Q96I24 572 aaKnown RBP eCLIP15.3■□□□□ 0.04
LIG1-208ENST00000595758 ZNF512Q96ME7 567 aaPredicted RBP15.3■□□□□ 0.04
LIG1-208ENST00000595758 LPIN3Q9BQK8 851 aa15.3■□□□□ 0.04
LIG1-208ENST00000595758 NT5C1AQ9BXI3 368 aa15.3■□□□□ 0.04
LIG1-208ENST00000595758 DNAI2Q9GZS0 605 aa15.3■□□□□ 0.04
LIG1-208ENST00000595758 POMKQ9H5K3 350 aa15.3■□□□□ 0.04
LIG1-208ENST00000595758 FAM124BQ9H5Z6 455 aaPredicted RBP15.3■□□□□ 0.04
LIG1-208ENST00000595758 CISHQ9NSE2 258 aa15.3■□□□□ 0.04
LIG1-208ENST00000595758 HMGXB4Q9UGU5 601 aa15.3■□□□□ 0.04
LIG1-208ENST00000595758 BECN2A8MW95 431 aa15.29■□□□□ 0.04
LIG1-208ENST00000595758 CILPO75339 1184 aa15.29■□□□□ 0.04
LIG1-208ENST00000595758 CAVIN2O95810 425 aa15.29■□□□□ 0.04
LIG1-208ENST00000595758 TPM2P07951 284 aa15.29■□□□□ 0.04
LIG1-208ENST00000595758 ZNF18P17022 549 aa15.29■□□□□ 0.04
LIG1-208ENST00000595758 YWHAEP62258 255 aaKnown RBP15.29■□□□□ 0.04
LIG1-208ENST00000595758 ORC1Q13415 861 aa15.29■□□□□ 0.04
LIG1-208ENST00000595758 KRT31Q15323 416 aa15.29■□□□□ 0.04
LIG1-208ENST00000595758 EXOC3L4Q17RC7 722 aa15.29■□□□□ 0.04
LIG1-208ENST00000595758 CFAP221Q4G0U5 840 aa15.29■□□□□ 0.04
LIG1-208ENST00000595758 IQCEQ6IPM2 695 aa15.29■□□□□ 0.04
LIG1-208ENST00000595758 GRASPQ7Z6J2 395 aaPredicted RBP15.29■□□□□ 0.04
LIG1-208ENST00000595758 PPM1KQ8N3J5 372 aa15.29■□□□□ 0.04
LIG1-208ENST00000595758 WHAMMQ8TF30 809 aa15.29■□□□□ 0.04
LIG1-208ENST00000595758 PCED1BQ96HM7 432 aa15.29■□□□□ 0.04
LIG1-208ENST00000595758 TWNKQ96RR1 684 aa15.29■□□□□ 0.04
LIG1-208ENST00000595758 PHF7Q9BWX1 381 aaPredicted RBP15.29■□□□□ 0.04
LIG1-208ENST00000595758 WDR6Q9NNW5 1121 aaKnown RBP15.29■□□□□ 0.04
LIG1-208ENST00000595758 CEP72Q9P209 647 aa15.29■□□□□ 0.04
LIG1-208ENST00000595758 SPTBN5Q9NRC6 3674 aaKnown RBP15.29■□□□□ 0.04
LIG1-208ENST00000595758 PTPN2P17706 415 aa15.28■□□□□ 0.04
LIG1-208ENST00000595758 SLC9A1P19634 815 aa15.28■□□□□ 0.04
LIG1-208ENST00000595758 BDNFP23560 247 aa15.28■□□□□ 0.04
LIG1-208ENST00000595758 MAGEA11P43364 429 aa15.28■□□□□ 0.04
LIG1-208ENST00000595758 RPL10AP62906 217 aaKnown RBP15.28■□□□□ 0.04
LIG1-208ENST00000595758 NTHL1P78549 312 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms