RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 ZBTB44Q8NCP5 570 aa19.25■□□□□ 0.67
HOMER3-208ENST00000595756 MTMR12Q9C0I1 747 aa19.25■□□□□ 0.67
HOMER3-208ENST00000595756 TASP1Q9H6P5 420 aa19.25■□□□□ 0.67
HOMER3-208ENST00000595756 ZSCAN32Q9NX65 697 aa19.25■□□□□ 0.67
HOMER3-208ENST00000595756 GDAP2Q9NXN4 497 aa19.25■□□□□ 0.67
HOMER3-208ENST00000595756 L1RE1Q9UN81 338 aa19.25■□□□□ 0.67
HOMER3-208ENST00000595756 AGAP1Q9UPQ3 857 aa19.25■□□□□ 0.67
HOMER3-208ENST00000595756 PCDHB5Q9Y5E4 795 aa19.25■□□□□ 0.67
HOMER3-208ENST00000595756 GOLGA8IPA6NC78 632 aa19.24■□□□□ 0.67
HOMER3-208ENST00000595756 GOLGA8JA6NMD2 632 aa19.24■□□□□ 0.67
HOMER3-208ENST00000595756 DPYSL4O14531 572 aa19.24■□□□□ 0.67
HOMER3-208ENST00000595756 EIF3DO15371 548 aaKnown RBP eCLIP19.24■□□□□ 0.67
HOMER3-208ENST00000595756 HUS1O60921 280 aa19.24■□□□□ 0.67
HOMER3-208ENST00000595756 TMEM191BP0C7N4 346 aa19.24■□□□□ 0.67
HOMER3-208ENST00000595756 CYP4F8P98187 520 aa19.24■□□□□ 0.67
HOMER3-208ENST00000595756 MTAPQ13126 283 aa19.24■□□□□ 0.67
HOMER3-208ENST00000595756 ARHGAP29Q52LW3 1261 aa19.24■□□□□ 0.67
HOMER3-208ENST00000595756 MAMSTRQ6ZN01 415 aa19.24■□□□□ 0.67
HOMER3-208ENST00000595756 CLEC17AQ6ZS10 378 aa19.24■□□□□ 0.67
HOMER3-208ENST00000595756 TOP6BLQ8N6T0 577 aa19.24■□□□□ 0.67
HOMER3-208ENST00000595756 SUMF1Q8NBK3 374 aa19.24■□□□□ 0.67
HOMER3-208ENST00000595756 ACBD6Q9BR61 282 aa19.24■□□□□ 0.67
HOMER3-208ENST00000595756 FAM126AQ9BYI3 521 aaPredicted RBP19.24■□□□□ 0.67
HOMER3-208ENST00000595756 PCIF1Q9H4Z3 704 aa19.24■□□□□ 0.67
HOMER3-208ENST00000595756 C8orf33Q9H7E9 229 aaPredicted RBP19.24■□□□□ 0.67
HOMER3-208ENST00000595756 PDE11AQ9HCR9 933 aa19.24■□□□□ 0.67
HOMER3-208ENST00000595756 ABCB6Q9NP58 842 aa19.24■□□□□ 0.67
HOMER3-208ENST00000595756 CACNA1AO00555 2505 aa19.24■□□□□ 0.67
HOMER3-208ENST00000595756 UBE4BO95155 1302 aa19.24■□□□□ 0.67
HOMER3-208ENST00000595756 ZNF638Q14966 1978 aaKnown RBP19.23■□□□□ 0.67
HOMER3-208ENST00000595756 PRAMEF12O95522 483 aa19.23■□□□□ 0.67
HOMER3-208ENST00000595756 NDUFA8P51970 172 aa19.23■□□□□ 0.67
HOMER3-208ENST00000595756 RBP5P82980 135 aa19.23■□□□□ 0.67
HOMER3-208ENST00000595756 PLCB2Q00722 1185 aa19.23■□□□□ 0.67
HOMER3-208ENST00000595756 MYL7Q01449 175 aa19.23■□□□□ 0.67
HOMER3-208ENST00000595756 BFSP1Q12934 665 aa19.23■□□□□ 0.67
HOMER3-208ENST00000595756 SURF1Q15526 300 aa19.23■□□□□ 0.67
HOMER3-208ENST00000595756 TAF12Q16514 161 aa19.23■□□□□ 0.67
HOMER3-208ENST00000595756 INTS6LQ5JSJ4 861 aaKnown RBP19.23■□□□□ 0.67
HOMER3-208ENST00000595756 CSGALNACT2Q8N6G5 542 aa19.23■□□□□ 0.67
HOMER3-208ENST00000595756 GLIS3Q8NEA6 775 aa19.23■□□□□ 0.67
HOMER3-208ENST00000595756 RUBCNQ92622 972 aa19.23■□□□□ 0.67
HOMER3-208ENST00000595756 ANKRD36BP1Q96IX9 119 aa19.23■□□□□ 0.67
HOMER3-208ENST00000595756 GBP4Q96PP9 640 aa19.23■□□□□ 0.67
HOMER3-208ENST00000595756 C7orf25Q9BPX7 421 aa19.23■□□□□ 0.67
HOMER3-208ENST00000595756 TMLHEQ9NVH6 421 aa19.23■□□□□ 0.67
HOMER3-208ENST00000595756 DDX43Q9NXZ2 648 aaKnown RBP19.23■□□□□ 0.67
HOMER3-208ENST00000595756 SERTAD1Q9UHV2 236 aa19.23■□□□□ 0.67
HOMER3-208ENST00000595756 SIX4Q9UIU6 781 aa19.23■□□□□ 0.67
HOMER3-208ENST00000595756 PTPRDP23468 1912 aa19.23■□□□□ 0.67
HOMER3-208ENST00000595756 LILRB5O75023 590 aa19.22■□□□□ 0.67
HOMER3-208ENST00000595756 ZNF202O95125 648 aa19.22■□□□□ 0.67
HOMER3-208ENST00000595756 TDGF1P13385 188 aa19.22■□□□□ 0.67
HOMER3-208ENST00000595756 CCNE1P24864 410 aa19.22■□□□□ 0.67
HOMER3-208ENST00000595756 DDX6P26196 483 aaKnown RBP eCLIP19.22■□□□□ 0.67
HOMER3-208ENST00000595756 ASIC1P78348 528 aa19.22■□□□□ 0.67
HOMER3-208ENST00000595756 LRRC32Q14392 662 aa19.22■□□□□ 0.67
HOMER3-208ENST00000595756 PPP2R5DQ14738 602 aa19.22■□□□□ 0.67
HOMER3-208ENST00000595756 EPM2AIP1Q7L775 607 aaPredicted RBP19.22■□□□□ 0.67
HOMER3-208ENST00000595756 ADGRF2Q8IZF7 708 aa19.22■□□□□ 0.67
HOMER3-208ENST00000595756 BPIFB1Q8TDL5 484 aa19.22■□□□□ 0.67
HOMER3-208ENST00000595756 GIPC2Q8TF65 315 aa19.22■□□□□ 0.67
HOMER3-208ENST00000595756 NOC3LQ8WTT2 800 aaKnown RBP19.22■□□□□ 0.67
HOMER3-208ENST00000595756 ATRIPQ8WXE1 791 aa19.22■□□□□ 0.67
HOMER3-208ENST00000595756 LRRC3BQ96PB8 259 aa19.22■□□□□ 0.67
HOMER3-208ENST00000595756 PKMYT1Q99640 499 aa19.22■□□□□ 0.67
HOMER3-208ENST00000595756 INTS13Q9NVM9 706 aa19.22■□□□□ 0.67
HOMER3-208ENST00000595756 GPR179Q6PRD1 2367 aa19.21■□□□□ 0.67
HOMER3-208ENST00000595756 MYBPHLA2RUH7 354 aa19.21■□□□□ 0.67
HOMER3-208ENST00000595756 ZNF233A6NK53 670 aa19.21■□□□□ 0.67
HOMER3-208ENST00000595756 SLC38A8A6NNN8 435 aa19.21■□□□□ 0.67
HOMER3-208ENST00000595756 SOBPA7XYQ1 873 aa19.21■□□□□ 0.67
HOMER3-208ENST00000595756 ACTN4O43707 911 aaKnown RBP19.21■□□□□ 0.67
HOMER3-208ENST00000595756 KRT19P08727 400 aa19.21■□□□□ 0.67
HOMER3-208ENST00000595756 CSH1P0DML2 217 aa19.21■□□□□ 0.67
HOMER3-208ENST00000595756 CSH2P0DML3 217 aa19.21■□□□□ 0.67
HOMER3-208ENST00000595756 CHRNB1P11230 501 aa19.21■□□□□ 0.67
HOMER3-208ENST00000595756 HMGA1P17096 107 aaKnown RBP19.21■□□□□ 0.67
HOMER3-208ENST00000595756 LHX1P48742 406 aa19.21■□□□□ 0.67
HOMER3-208ENST00000595756 CCR3P51677 355 aa19.21■□□□□ 0.67
HOMER3-208ENST00000595756 FAM160A1Q05DH4 1040 aa19.21■□□□□ 0.67
HOMER3-208ENST00000595756 FAM26FQ5R3K3 315 aa19.21■□□□□ 0.67
HOMER3-208ENST00000595756 TMEM150AQ86TG1 271 aa19.21■□□□□ 0.67
HOMER3-208ENST00000595756 RALGPS2Q86X27 583 aaPredicted RBP19.21■□□□□ 0.67
HOMER3-208ENST00000595756 HPS3Q969F9 1004 aa19.21■□□□□ 0.67
HOMER3-208ENST00000595756 FAM84AQ96KN4 292 aa19.21■□□□□ 0.67
HOMER3-208ENST00000595756 HINFPQ9BQA5 517 aa19.21■□□□□ 0.67
HOMER3-208ENST00000595756 EPC1Q9H2F5 836 aa19.21■□□□□ 0.67
HOMER3-208ENST00000595756 LMAN1LQ9HAT1 526 aa19.21■□□□□ 0.67
HOMER3-208ENST00000595756 KIAA1586Q9HCI6 787 aa19.21■□□□□ 0.67
HOMER3-208ENST00000595756 HSPBP1Q9NZL4 362 aa19.21■□□□□ 0.67
HOMER3-208ENST00000595756 SNX9Q9Y5X1 595 aa19.21■□□□□ 0.67
HOMER3-208ENST00000595756 GREB1Q4ZG55 1949 aa19.21■□□□□ 0.67
HOMER3-208ENST00000595756 PTPRJQ12913 1337 aa19.21■□□□□ 0.67
HOMER3-208ENST00000595756 HELZP42694 1942 aaKnown RBP19.2■□□□□ 0.66
HOMER3-208ENST00000595756 PVALEFA0A1B0GWK0 134 aa19.2■□□□□ 0.66
HOMER3-208ENST00000595756 SPECC1L-ADORA2AF8WAN1 911 aa19.2■□□□□ 0.66
HOMER3-208ENST00000595756 GABRDO14764 452 aa19.2■□□□□ 0.66
HOMER3-208ENST00000595756 PRPF40AO75400 957 aaKnown RBP19.2■□□□□ 0.66
HOMER3-208ENST00000595756 TNNC2P02585 160 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms