RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 FRMD5Q7Z6J6 570 aa16.43■□□□□ 0.22
USE1-206ENST00000595101 DCP1BQ8IZD4 617 aaKnown RBP16.43■□□□□ 0.22
USE1-206ENST00000595101 GIPC2Q8TF65 315 aa16.43■□□□□ 0.22
USE1-206ENST00000595101 ING5Q8WYH8 240 aa16.43■□□□□ 0.22
USE1-206ENST00000595101 TATDN2Q93075 761 aa16.43■□□□□ 0.22
USE1-206ENST00000595101 SNX25Q9H3E2 840 aa16.43■□□□□ 0.22
USE1-206ENST00000595101 RAB20Q9NX57 234 aa16.43■□□□□ 0.22
USE1-206ENST00000595101 MUTYHQ9UIF7 546 aa16.43■□□□□ 0.22
USE1-206ENST00000595101 A8MXQ7 604 aa16.43■□□□□ 0.22
USE1-206ENST00000595101 GJA1P17302 382 aa16.43■□□□□ 0.22
USE1-206ENST00000595101 FSHRP23945 695 aa16.43■□□□□ 0.22
USE1-206ENST00000595101 PCSK1P29120 753 aa16.43■□□□□ 0.22
USE1-206ENST00000595101 GBP2P32456 591 aaPredicted RBP16.43■□□□□ 0.22
USE1-206ENST00000595101 PABPC1LQ4VXU2 614 aaKnown RBP16.43■□□□□ 0.22
USE1-206ENST00000595101 HSP90AA4PQ58FG1 418 aa16.43■□□□□ 0.22
USE1-206ENST00000595101 CREBRFQ8IUR6 639 aa16.43■□□□□ 0.22
USE1-206ENST00000595101 FBXL13Q8NEE6 735 aa16.43■□□□□ 0.22
USE1-206ENST00000595101 ARID3AQ99856 593 aa16.43■□□□□ 0.22
USE1-206ENST00000595101 SMOC2Q9H3U7 446 aa16.43■□□□□ 0.22
USE1-206ENST00000595101 CDH9Q9ULB4 789 aa16.43■□□□□ 0.22
USE1-206ENST00000595101 MAFFQ9ULX9 164 aa16.43■□□□□ 0.22
USE1-206ENST00000595101 HAPLN1P10915 354 aaPredicted RBP16.42■□□□□ 0.22
USE1-206ENST00000595101 DDR2Q16832 855 aa16.42■□□□□ 0.22
USE1-206ENST00000595101 MDH1BQ5I0G3 518 aa16.42■□□□□ 0.22
USE1-206ENST00000595101 RTL10Q7L3V2 364 aa16.42■□□□□ 0.22
USE1-206ENST00000595101 TRIM59Q8IWR1 403 aa16.42■□□□□ 0.22
USE1-206ENST00000595101 SPATA18Q8TC71 538 aa16.42■□□□□ 0.22
USE1-206ENST00000595101 RSAD2Q8WXG1 361 aa16.42■□□□□ 0.22
USE1-206ENST00000595101 MYLPFQ96A32 169 aa16.42■□□□□ 0.22
USE1-206ENST00000595101 PCED1BQ96HM7 432 aa16.42■□□□□ 0.22
USE1-206ENST00000595101 TWNKQ96RR1 684 aa16.42■□□□□ 0.22
USE1-206ENST00000595101 LRRC3Q9BY71 257 aa16.42■□□□□ 0.22
USE1-206ENST00000595101 EPHX3Q9H6B9 360 aa16.42■□□□□ 0.22
USE1-206ENST00000595101 METTL14Q9HCE5 456 aaKnown RBP16.42■□□□□ 0.22
USE1-206ENST00000595101 ZNF334Q9HCZ1 680 aaPredicted RBP16.42■□□□□ 0.22
USE1-206ENST00000595101 TMEM30AQ9NV96 361 aa16.42■□□□□ 0.22
USE1-206ENST00000595101 NR2E1Q9Y466 385 aa16.42■□□□□ 0.22
USE1-206ENST00000595101 PCDHB5Q9Y5E4 795 aa16.42■□□□□ 0.22
USE1-206ENST00000595101 CLDN5O00501 218 aa16.41■□□□□ 0.22
USE1-206ENST00000595101 MOSPD3O75425 235 aa16.41■□□□□ 0.22
USE1-206ENST00000595101 MBD3O95983 291 aa16.41■□□□□ 0.22
USE1-206ENST00000595101 POU2F2P09086 479 aa16.41■□□□□ 0.22
USE1-206ENST00000595101 PTPN2P17706 415 aa16.41■□□□□ 0.22
USE1-206ENST00000595101 PTPN1P18031 435 aaKnown RBP16.41■□□□□ 0.22
USE1-206ENST00000595101 ALDH1A3P47895 512 aa16.41■□□□□ 0.22
USE1-206ENST00000595101 FMO5P49326 533 aa16.41■□□□□ 0.22
USE1-206ENST00000595101 LRMPQ12912 555 aa16.41■□□□□ 0.22
USE1-206ENST00000595101 MTMR3Q13615 1198 aa16.41■□□□□ 0.22
USE1-206ENST00000595101 TDRD5Q8NAT2 981 aaKnown RBP16.41■□□□□ 0.22
USE1-206ENST00000595101 SPPL2BQ8TCT7 592 aa16.41■□□□□ 0.22
USE1-206ENST00000595101 TAF4BQ92750 862 aa16.41■□□□□ 0.22
USE1-206ENST00000595101 FGF13Q92913 245 aa16.41■□□□□ 0.22
USE1-206ENST00000595101 ZNF512Q96ME7 567 aaPredicted RBP16.41■□□□□ 0.22
USE1-206ENST00000595101 BCO2Q9BYV7 579 aa16.41■□□□□ 0.22
USE1-206ENST00000595101 USTQ9Y2C2 406 aa16.41■□□□□ 0.22
USE1-206ENST00000595101 COQ4Q9Y3A0 265 aa16.41■□□□□ 0.22
USE1-206ENST00000595101 NOTCH4Q99466 2003 aa16.41■□□□□ 0.22
USE1-206ENST00000595101 CEBPBP17676 345 aa16.41■□□□□ 0.22
USE1-206ENST00000595101 CD58P19256 250 aa16.41■□□□□ 0.22
USE1-206ENST00000595101 BDNFP23560 247 aa16.41■□□□□ 0.22
USE1-206ENST00000595101 NDST1P52848 882 aa16.41■□□□□ 0.22
USE1-206ENST00000595101 CACNA2D1P54289 1103 aa16.41■□□□□ 0.22
USE1-206ENST00000595101 MARSP56192 900 aaKnown RBP16.41■□□□□ 0.22
USE1-206ENST00000595101 CYP27A1Q02318 531 aa16.41■□□□□ 0.22
USE1-206ENST00000595101 KCNH2Q12809 1159 aa16.41■□□□□ 0.22
USE1-206ENST00000595101 PRSS36Q5K4E3 855 aa16.41■□□□□ 0.22
USE1-206ENST00000595101 C11orf57Q6ZUT1 292 aaPredicted RBP16.41■□□□□ 0.22
USE1-206ENST00000595101 OTOP3Q7RTS5 596 aa16.41■□□□□ 0.22
USE1-206ENST00000595101 DNAJB7Q7Z6W7 309 aaPredicted RBP16.41■□□□□ 0.22
USE1-206ENST00000595101 TMC8Q8IU68 726 aa16.41■□□□□ 0.22
USE1-206ENST00000595101 CNOT6LQ96LI5 555 aaKnown RBP16.41■□□□□ 0.22
USE1-206ENST00000595101 STX10O60499 249 aa16.4■□□□□ 0.22
USE1-206ENST00000595101 MYL4P12829 197 aa16.4■□□□□ 0.22
USE1-206ENST00000595101 LAMP2P13473 410 aa16.4■□□□□ 0.22
USE1-206ENST00000595101 TUFMP49411 452 aaKnown RBP16.4■□□□□ 0.22
USE1-206ENST00000595101 EPHB3P54753 998 aa16.4■□□□□ 0.22
USE1-206ENST00000595101 NFE2Q16621 373 aaPredicted RBP16.4■□□□□ 0.22
USE1-206ENST00000595101 CCDC183Q5T5S1 534 aa16.4■□□□□ 0.22
USE1-206ENST00000595101 CAVIN1Q6NZI2 390 aaKnown RBP16.4■□□□□ 0.22
USE1-206ENST00000595101 ACOT1Q86TX2 421 aa16.4■□□□□ 0.22
USE1-206ENST00000595101 SPATA2LQ8IUW3 424 aaPredicted RBP16.4■□□□□ 0.22
USE1-206ENST00000595101 NPAS3Q8IXF0 933 aa16.4■□□□□ 0.22
USE1-206ENST00000595101 C12orf29Q8N999 325 aa16.4■□□□□ 0.22
USE1-206ENST00000595101 B3GALNT2Q8NCR0 500 aa16.4■□□□□ 0.22
USE1-206ENST00000595101 MYCBPAPQ8TBZ2 947 aa16.4■□□□□ 0.22
USE1-206ENST00000595101 WHAMMQ8TF30 809 aa16.4■□□□□ 0.22
USE1-206ENST00000595101 RPP25Q9BUL9 199 aaKnown RBP16.4■□□□□ 0.22
USE1-206ENST00000595101 IMPG2Q9BZV3 1241 aa16.4■□□□□ 0.22
USE1-206ENST00000595101 NIF3L1Q9GZT8 377 aa16.4■□□□□ 0.22
USE1-206ENST00000595101 MRPS23Q9Y3D9 190 aaKnown RBP16.4■□□□□ 0.22
USE1-206ENST00000595101 FAM163BP0C2L3 166 aa16.39■□□□□ 0.21
USE1-206ENST00000595101 SMARCB1Q12824 385 aa16.39■□□□□ 0.21
USE1-206ENST00000595101 CFAP221Q4G0U5 840 aa16.39■□□□□ 0.21
USE1-206ENST00000595101 IQCEQ6IPM2 695 aa16.39■□□□□ 0.21
USE1-206ENST00000595101 PAQR9Q6ZVX9 377 aa16.39■□□□□ 0.21
USE1-206ENST00000595101 GAREM2Q75VX8 874 aa16.39■□□□□ 0.21
USE1-206ENST00000595101 SCN4BQ8IWT1 228 aa16.39■□□□□ 0.21
USE1-206ENST00000595101 ZDHHC14Q8IZN3 488 aa16.39■□□□□ 0.21
USE1-206ENST00000595101 LMO3Q8TAP4 145 aa16.39■□□□□ 0.21
USE1-206ENST00000595101 FAM200AQ8TCP9 573 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms