RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 INO80B-WBP1J3KQ70 363 aa16.25■□□□□ 0.19
PNKP-204ENST00000594661 ATP6V1G1O75348 118 aa16.25■□□□□ 0.19
PNKP-204ENST00000594661 VNN1O95497 513 aa16.25■□□□□ 0.19
PNKP-204ENST00000594661 HLA-DRAP01903 254 aa16.25■□□□□ 0.19
PNKP-204ENST00000594661 PDHA1P08559 390 aa16.25■□□□□ 0.19
PNKP-204ENST00000594661 MMP13P45452 471 aa16.25■□□□□ 0.19
PNKP-204ENST00000594661 PTENP60484 403 aa16.25■□□□□ 0.19
PNKP-204ENST00000594661 MBTD1Q05BQ5 628 aa16.25■□□□□ 0.19
PNKP-204ENST00000594661 MAP2K5Q13163 448 aa16.25■□□□□ 0.19
PNKP-204ENST00000594661 KRT71Q3SY84 523 aa16.25■□□□□ 0.19
PNKP-204ENST00000594661 FOXB2Q5VYV0 432 aa16.25■□□□□ 0.19
PNKP-204ENST00000594661 RGMBQ6NW40 437 aa16.25■□□□□ 0.19
PNKP-204ENST00000594661 NOP9Q86U38 636 aaKnown RBP16.25■□□□□ 0.19
PNKP-204ENST00000594661 SLC47A2Q86VL8 602 aa16.25■□□□□ 0.19
PNKP-204ENST00000594661 ACTRT1Q8TDG2 376 aa16.25■□□□□ 0.19
PNKP-204ENST00000594661 EPS8L1Q8TE68 723 aa16.25■□□□□ 0.19
PNKP-204ENST00000594661 AZIN2Q96A70 460 aa16.25■□□□□ 0.19
PNKP-204ENST00000594661 PPP1R16BQ96T49 567 aa16.25■□□□□ 0.19
PNKP-204ENST00000594661 CGRRF1Q99675 332 aa16.25■□□□□ 0.19
PNKP-204ENST00000594661 TCHPQ9BT92 498 aa16.25■□□□□ 0.19
PNKP-204ENST00000594661 INO80BQ9C086 356 aaPredicted RBP16.25■□□□□ 0.19
PNKP-204ENST00000594661 FZD8Q9H461 694 aa16.25■□□□□ 0.19
PNKP-204ENST00000594661 TUT1Q9H6E5 874 aaKnown RBP16.25■□□□□ 0.19
PNKP-204ENST00000594661 SNX3O60493 162 aa16.24■□□□□ 0.19
PNKP-204ENST00000594661 IQCF3P0C7M6 154 aa16.24■□□□□ 0.19
PNKP-204ENST00000594661 HOXD8P13378 290 aaPredicted RBP16.24■□□□□ 0.19
PNKP-204ENST00000594661 SKIV2L2P42285 1042 aaKnown RBP16.24■□□□□ 0.19
PNKP-204ENST00000594661 PIK3CAP42336 1068 aa16.24■□□□□ 0.19
PNKP-204ENST00000594661 EIF3BP55884 814 aaKnown RBP16.24■□□□□ 0.19
PNKP-204ENST00000594661 SPDYCQ5MJ68 293 aa16.24■□□□□ 0.19
PNKP-204ENST00000594661 CDR2LQ86X02 465 aaPredicted RBP16.24■□□□□ 0.19
PNKP-204ENST00000594661 BRSK2Q8IWQ3 736 aa16.24■□□□□ 0.19
PNKP-204ENST00000594661 KLHL7Q8IXQ5 586 aa16.24■□□□□ 0.19
PNKP-204ENST00000594661 OR5B17Q8NGF7 314 aa16.24■□□□□ 0.19
PNKP-204ENST00000594661 NDNQ99608 321 aa16.24■□□□□ 0.19
PNKP-204ENST00000594661 FAM192AQ9GZU8 254 aa16.24■□□□□ 0.19
PNKP-204ENST00000594661 DLGAP2Q9P1A6 1054 aa16.24■□□□□ 0.19
PNKP-204ENST00000594661 NKX1-2Q9UD57 310 aaPredicted RBP16.24■□□□□ 0.19
PNKP-204ENST00000594661 NOCTQ9UK39 431 aaKnown RBP16.24■□□□□ 0.19
PNKP-204ENST00000594661 PGRMC1O00264 195 aaKnown RBP16.24■□□□□ 0.19
PNKP-204ENST00000594661 ACKR2O00590 384 aa16.24■□□□□ 0.19
PNKP-204ENST00000594661 FTLP02792 175 aaPredicted RBP16.24■□□□□ 0.19
PNKP-204ENST00000594661 CHRNB2P17787 502 aa16.24■□□□□ 0.19
PNKP-204ENST00000594661 PROZP22891 400 aa16.24■□□□□ 0.19
PNKP-204ENST00000594661 INHBCP55103 352 aa16.24■□□□□ 0.19
PNKP-204ENST00000594661 MCL1Q07820 350 aa16.24■□□□□ 0.19
PNKP-204ENST00000594661 TSNAXIP1Q2TAA8 658 aa16.24■□□□□ 0.19
PNKP-204ENST00000594661 SCARA3Q6AZY7 606 aa16.24■□□□□ 0.19
PNKP-204ENST00000594661 IQSEC1Q6DN90 963 aa16.24■□□□□ 0.19
PNKP-204ENST00000594661 SPOPLQ6IQ16 392 aa16.24■□□□□ 0.19
PNKP-204ENST00000594661 IFNL1Q8IU54 200 aa16.24■□□□□ 0.19
PNKP-204ENST00000594661 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.24■□□□□ 0.19
PNKP-204ENST00000594661 UBLCP1Q8WVY7 318 aaPredicted RBP16.24■□□□□ 0.19
PNKP-204ENST00000594661 NCSTNQ92542 709 aa16.24■□□□□ 0.19
PNKP-204ENST00000594661 HES6Q96HZ4 224 aa16.24■□□□□ 0.19
PNKP-204ENST00000594661 IFT122Q9HBG6 1241 aa16.24■□□□□ 0.19
PNKP-204ENST00000594661 TMEM165Q9HC07 324 aa16.24■□□□□ 0.19
PNKP-204ENST00000594661 PTPRHQ9HD43 1115 aa16.24■□□□□ 0.19
PNKP-204ENST00000594661 STK38LQ9Y2H1 464 aa16.24■□□□□ 0.19
PNKP-204ENST00000594661 NOC2LQ9Y3T9 749 aaKnown RBP16.24■□□□□ 0.19
PNKP-204ENST00000594661 ZSWIM8A7E2V4 1837 aa16.23■□□□□ 0.19
PNKP-204ENST00000594661 OGTO15294 1046 aa16.23■□□□□ 0.19
PNKP-204ENST00000594661 ZC3H11AO75152 810 aaKnown RBP eCLIP16.23■□□□□ 0.19
PNKP-204ENST00000594661 CSDE1O75534 798 aaKnown RBP16.23■□□□□ 0.19
PNKP-204ENST00000594661 SLC10A3P09131 477 aa16.23■□□□□ 0.19
PNKP-204ENST00000594661 CCNB1P14635 433 aa16.23■□□□□ 0.19
PNKP-204ENST00000594661 GCNT1Q02742 428 aa16.23■□□□□ 0.19
PNKP-204ENST00000594661 TNFAIP2Q03169 654 aa16.23■□□□□ 0.19
PNKP-204ENST00000594661 DEUP1Q05D60 604 aa16.23■□□□□ 0.19
PNKP-204ENST00000594661 ATF7IP2Q5U623 682 aa16.23■□□□□ 0.19
PNKP-204ENST00000594661 EEF1DP3Q658K8 133 aa16.23■□□□□ 0.19
PNKP-204ENST00000594661 C17orf99Q6UX52 265 aa16.23■□□□□ 0.19
PNKP-204ENST00000594661 TSHZ1Q6ZSZ6 1077 aa16.23■□□□□ 0.19
PNKP-204ENST00000594661 KIF2BQ8N4N8 673 aa16.23■□□□□ 0.19
PNKP-204ENST00000594661 ENDOVQ8N8Q3 282 aaKnown RBP16.23■□□□□ 0.19
PNKP-204ENST00000594661 LENG1Q96BZ8 264 aaPredicted RBP16.23■□□□□ 0.19
PNKP-204ENST00000594661 PCDHB18PQ96TA0 734 aa16.23■□□□□ 0.19
PNKP-204ENST00000594661 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.23■□□□□ 0.193e-9■■■□□ 18.5
PNKP-204ENST00000594661 ADAM7Q9H2U9 754 aa16.23■□□□□ 0.19
PNKP-204ENST00000594661 C1orf112Q9NSG2 853 aa16.23■□□□□ 0.19
PNKP-204ENST00000594661 GALNT8Q9NY28 637 aa16.23■□□□□ 0.19
PNKP-204ENST00000594661 COL1A2P08123 1366 aa16.23■□□□□ 0.19
PNKP-204ENST00000594661 MAGEB2O15479 319 aa16.22■□□□□ 0.19
PNKP-204ENST00000594661 VTNP04004 478 aa16.22■□□□□ 0.19
PNKP-204ENST00000594661 CCL14Q16627 93 aa16.22■□□□□ 0.19
PNKP-204ENST00000594661 MPZL3Q6UWV2 235 aa16.22■□□□□ 0.19
PNKP-204ENST00000594661 TMC3Q7Z5M5 1100 aa16.22■□□□□ 0.19
PNKP-204ENST00000594661 PHC3Q8NDX5 983 aa16.22■□□□□ 0.19
PNKP-204ENST00000594661 STK32AQ8WU08 396 aa16.22■□□□□ 0.19
PNKP-204ENST00000594661 RAB3IPQ96QF0 476 aaPredicted RBP16.22■□□□□ 0.19
PNKP-204ENST00000594661 AP1M1Q9BXS5 423 aa16.22■□□□□ 0.19
PNKP-204ENST00000594661 NEUROG2Q9H2A3 272 aa16.22■□□□□ 0.19
PNKP-204ENST00000594661 OCEL1Q9H607 264 aa16.22■□□□□ 0.19
PNKP-204ENST00000594661 ZMYND8Q9ULU4 1186 aaPredicted RBP16.22■□□□□ 0.19
PNKP-204ENST00000594661 COG5Q9UP83 839 aa16.22■□□□□ 0.19
PNKP-204ENST00000594661 AKT3Q9Y243 479 aa16.22■□□□□ 0.19
PNKP-204ENST00000594661 USP15Q9Y4E8 981 aaPredicted RBP16.22■□□□□ 0.19
PNKP-204ENST00000594661 SLC4A7Q9Y6M7 1214 aa16.22■□□□□ 0.19
PNKP-204ENST00000594661 A0A087WZ62 844 aa16.22■□□□□ 0.19
PNKP-204ENST00000594661 O00370 1275 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms