RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 TARSP26639 723 aaKnown RBP17.36■□□□□ 0.37
LIG1-206ENST00000594067 GCKP35557 465 aa17.36■□□□□ 0.37
LIG1-206ENST00000594067 MYL6P60660 151 aa17.36■□□□□ 0.37
LIG1-206ENST00000594067 TAF11Q15544 211 aa17.36■□□□□ 0.37
LIG1-206ENST00000594067 SLC1A5Q15758 541 aa17.36■□□□□ 0.37
LIG1-206ENST00000594067 GPAT2Q6NUI2 795 aa17.36■□□□□ 0.37
LIG1-206ENST00000594067 PPP1R2P3Q6NXS1 205 aa17.36■□□□□ 0.37
LIG1-206ENST00000594067 TDRPQ86YL5 185 aa17.36■□□□□ 0.37
LIG1-206ENST00000594067 TAB3Q8N5C8 712 aaPredicted RBP17.36■□□□□ 0.37
LIG1-206ENST00000594067 MTMR12Q9C0I1 747 aa17.36■□□□□ 0.37
LIG1-206ENST00000594067 RNPEPL1Q9HAU8 725 aa17.36■□□□□ 0.37
LIG1-206ENST00000594067 UBN1Q9NPG3 1134 aa17.36■□□□□ 0.37
LIG1-206ENST00000594067 HAO1Q9UJM8 370 aa17.36■□□□□ 0.37
LIG1-206ENST00000594067 LRRC42Q9Y546 428 aa17.36■□□□□ 0.37
LIG1-206ENST00000594067 MAFBQ9Y5Q3 323 aaPredicted RBP17.36■□□□□ 0.37
LIG1-206ENST00000594067 ALOX15BO15296 676 aa17.36■□□□□ 0.37
LIG1-206ENST00000594067 PRPF4O43172 522 aaKnown RBP eCLIP17.36■□□□□ 0.371e-6■■■■□ 23.6
LIG1-206ENST00000594067 PEX11AO75192 247 aa17.36■□□□□ 0.37
LIG1-206ENST00000594067 PIAS1O75925 651 aa17.36■□□□□ 0.37
LIG1-206ENST00000594067 T-ENOLP0DO92 83 aa17.36■□□□□ 0.37
LIG1-206ENST00000594067 GM2AP17900 193 aa17.36■□□□□ 0.37
LIG1-206ENST00000594067 CALB2P22676 271 aa17.36■□□□□ 0.37
LIG1-206ENST00000594067 CDKN2BP42772 138 aa17.36■□□□□ 0.37
LIG1-206ENST00000594067 SATB1Q01826 763 aa17.36■□□□□ 0.37
LIG1-206ENST00000594067 RNASELQ05823 741 aaKnown RBP17.36■□□□□ 0.37
LIG1-206ENST00000594067 SETDB1Q15047 1291 aa17.36■□□□□ 0.37
LIG1-206ENST00000594067 TFDP3Q5H9I0 405 aa17.36■□□□□ 0.37
LIG1-206ENST00000594067 LRRC37BQ96QE4 947 aa17.36■□□□□ 0.37
LIG1-206ENST00000594067 USH1CQ9Y6N9 552 aa17.36■□□□□ 0.37
LIG1-206ENST00000594067 A6NHS1 94 aa17.35■□□□□ 0.37
LIG1-206ENST00000594067 WEE2P0C1S8 567 aa17.35■□□□□ 0.37
LIG1-206ENST00000594067 CAPSQ13938 189 aa17.35■□□□□ 0.37
LIG1-206ENST00000594067 CCDC142Q17RM4 750 aa17.35■□□□□ 0.37
LIG1-206ENST00000594067 LRRC38Q5VT99 294 aa17.35■□□□□ 0.37
LIG1-206ENST00000594067 SCARA5Q6ZMJ2 495 aa17.35■□□□□ 0.37
LIG1-206ENST00000594067 CENPUQ71F23 418 aa17.35■□□□□ 0.37
LIG1-206ENST00000594067 SAMD7Q7Z3H4 446 aa17.35■□□□□ 0.37
LIG1-206ENST00000594067 AGGF1Q8N302 714 aaeCLIP17.35■□□□□ 0.37
LIG1-206ENST00000594067 WDTC1Q8N5D0 677 aa17.35■□□□□ 0.37
LIG1-206ENST00000594067 ARMC2Q8NEN0 867 aa17.35■□□□□ 0.37
LIG1-206ENST00000594067 SLC7A6OSQ96CW6 309 aaPredicted RBP17.35■□□□□ 0.37
LIG1-206ENST00000594067 ANKRD27Q96NW4 1050 aa17.35■□□□□ 0.37
LIG1-206ENST00000594067 FAM167BQ9BTA0 163 aa17.35■□□□□ 0.37
LIG1-206ENST00000594067 MAK16Q9BXY0 300 aaKnown RBP17.35■□□□□ 0.37
LIG1-206ENST00000594067 GINM1Q9NU53 330 aa17.35■□□□□ 0.37
LIG1-206ENST00000594067 ZMYND8Q9ULU4 1186 aaPredicted RBP17.35■□□□□ 0.37
LIG1-206ENST00000594067 ASS1P00966 412 aaKnown RBP17.35■□□□□ 0.37
LIG1-206ENST00000594067 IRX1P78414 480 aaPredicted RBP17.35■□□□□ 0.37
LIG1-206ENST00000594067 MTM1Q13496 603 aa17.35■□□□□ 0.37
LIG1-206ENST00000594067 EFTUD2Q15029 972 aaKnown RBP eCLIP17.35■□□□□ 0.371e-6■■■■■ 30.3
LIG1-206ENST00000594067 SMTNL2Q2TAL5 461 aa17.35■□□□□ 0.37
LIG1-206ENST00000594067 PRAMEF18Q5VWM3 479 aa17.35■□□□□ 0.37
LIG1-206ENST00000594067 TMEM35BQ8NCS4 154 aa17.35■□□□□ 0.37
LIG1-206ENST00000594067 ZNF280CQ8ND82 737 aa17.35■□□□□ 0.37
LIG1-206ENST00000594067 FAM13CQ8NE31 585 aa17.35■□□□□ 0.37
LIG1-206ENST00000594067 TCHPQ9BT92 498 aa17.35■□□□□ 0.37
LIG1-206ENST00000594067 ACAD9Q9H845 621 aa17.35■□□□□ 0.37
LIG1-206ENST00000594067 ZWILCHQ9H900 591 aa17.35■□□□□ 0.37
LIG1-206ENST00000594067 CISHQ9NSE2 258 aa17.35■□□□□ 0.37
LIG1-206ENST00000594067 LUC7L3O95232 432 aaKnown RBP17.34■□□□□ 0.37
LIG1-206ENST00000594067 GPX6P59796 221 aa17.34■□□□□ 0.37
LIG1-206ENST00000594067 LRRC8CQ8TDW0 803 aa17.34■□□□□ 0.37
LIG1-206ENST00000594067 TFAP2BQ92481 460 aa17.34■□□□□ 0.37
LIG1-206ENST00000594067 INPP5DQ92835 1189 aa17.34■□□□□ 0.37
LIG1-206ENST00000594067 SMG5Q9UPR3 1016 aaKnown RBP17.34■□□□□ 0.37
LIG1-206ENST00000594067 TPBGLP0DKB5 382 aa17.34■□□□□ 0.37
LIG1-206ENST00000594067 GDF10P55107 478 aa17.34■□□□□ 0.37
LIG1-206ENST00000594067 KCNT1Q5JUK3 1230 aa17.34■□□□□ 0.37
LIG1-206ENST00000594067 PPP1R15BQ5SWA1 713 aa17.34■□□□□ 0.37
LIG1-206ENST00000594067 ANKRD22Q5VYY1 191 aa17.34■□□□□ 0.37
LIG1-206ENST00000594067 RGS9BPQ6ZS82 235 aa17.34■□□□□ 0.37
LIG1-206ENST00000594067 BRSK2Q8IWQ3 736 aa17.34■□□□□ 0.37
LIG1-206ENST00000594067 STK32AQ8WU08 396 aa17.34■□□□□ 0.37
LIG1-206ENST00000594067 NKD2Q969F2 451 aaPredicted RBP17.34■□□□□ 0.37
LIG1-206ENST00000594067 PCDH9Q9HC56 1237 aa17.34■□□□□ 0.37
LIG1-206ENST00000594067 STK32BQ9NY57 414 aa17.34■□□□□ 0.37
LIG1-206ENST00000594067 AGTPBP1Q9UPW5 1226 aa17.34■□□□□ 0.37
LIG1-206ENST00000594067 SHOC2Q9UQ13 582 aa17.34■□□□□ 0.37
LIG1-206ENST00000594067 ATP2A1O14983 1001 aa17.34■□□□□ 0.37
LIG1-206ENST00000594067 ITGAVP06756 1048 aa17.34■□□□□ 0.37
LIG1-206ENST00000594067 SSTR1P30872 391 aa17.34■□□□□ 0.37
LIG1-206ENST00000594067 PIGHQ14442 188 aaPredicted RBP17.34■□□□□ 0.37
LIG1-206ENST00000594067 PDK4Q16654 411 aa17.34■□□□□ 0.37
LIG1-206ENST00000594067 HHATQ5VTY9 493 aa17.34■□□□□ 0.37
LIG1-206ENST00000594067 SCYL3Q8IZE3 742 aa17.34■□□□□ 0.37
LIG1-206ENST00000594067 ZNF483Q8TF39 744 aaPredicted RBP17.34■□□□□ 0.37
LIG1-206ENST00000594067 TBC1D10AQ9BXI6 508 aa17.34■□□□□ 0.37
LIG1-206ENST00000594067 TEX13BQ9BXU2 312 aa17.34■□□□□ 0.37
LIG1-206ENST00000594067 DDX56Q9NY93 547 aaKnown RBP17.34■□□□□ 0.37
LIG1-206ENST00000594067 PSMC3IPQ9P2W1 217 aaPredicted RBP17.34■□□□□ 0.37
LIG1-206ENST00000594067 TJP2Q9UDY2 1190 aa17.34■□□□□ 0.37
LIG1-206ENST00000594067 HACL1Q9UJ83 578 aa17.34■□□□□ 0.37
LIG1-206ENST00000594067 EDF1O60869 148 aaKnown RBP17.33■□□□□ 0.36
LIG1-206ENST00000594067 LSM8O95777 96 aaKnown RBP17.33■□□□□ 0.36
LIG1-206ENST00000594067 FGFR1P11362 822 aa17.33■□□□□ 0.36
LIG1-206ENST00000594067 PTPRAP18433 802 aa17.33■□□□□ 0.36
LIG1-206ENST00000594067 TFDP1Q14186 410 aa17.33■□□□□ 0.36
LIG1-206ENST00000594067 HIF1AQ16665 826 aa17.33■□□□□ 0.36
LIG1-206ENST00000594067 MSS51Q4VC12 460 aa17.33■□□□□ 0.36
LIG1-206ENST00000594067 SLC35B2Q8TB61 432 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms