RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 CSH1P0DML2 217 aa24.38■■□□□ 1.49
SSBP4-203ENST00000593641 CSH2P0DML3 217 aa24.38■■□□□ 1.49
SSBP4-203ENST00000593641 NLRP12P59046 1061 aa24.38■■□□□ 1.49
SSBP4-203ENST00000593641 KCNA1Q09470 495 aa24.38■■□□□ 1.49
SSBP4-203ENST00000593641 CCDC73Q6ZRK6 1079 aa24.38■■□□□ 1.49
SSBP4-203ENST00000593641 PDCL2Q8N4E4 241 aa24.38■■□□□ 1.49
SSBP4-203ENST00000593641 MAB21L3Q8N8X9 362 aa24.38■■□□□ 1.49
SSBP4-203ENST00000593641 MRPS31Q92665 395 aaKnown RBP24.38■■□□□ 1.49
SSBP4-203ENST00000593641 PI4K2AQ9BTU6 479 aa24.38■■□□□ 1.49
SSBP4-203ENST00000593641 KIF9Q9HAQ2 790 aa24.38■■□□□ 1.49
SSBP4-203ENST00000593641 GKN1Q9NS71 199 aa24.38■■□□□ 1.49
SSBP4-203ENST00000593641 RBAKQ9NYW8 714 aaPredicted RBP24.38■■□□□ 1.49
SSBP4-203ENST00000593641 MAGED2Q9UNF1 606 aaPredicted RBP24.38■■□□□ 1.49
SSBP4-203ENST00000593641 AGAP1Q9UPQ3 857 aa24.38■■□□□ 1.49
SSBP4-203ENST00000593641 HRO43593 1189 aa24.37■■□□□ 1.49
SSBP4-203ENST00000593641 HUS1O60921 280 aa24.37■■□□□ 1.49
SSBP4-203ENST00000593641 IDEP14735 1019 aa24.37■■□□□ 1.49
SSBP4-203ENST00000593641 GARTP22102 1010 aa24.37■■□□□ 1.49
SSBP4-203ENST00000593641 MYL7Q01449 175 aa24.37■■□□□ 1.49
SSBP4-203ENST00000593641 ALCAMQ13740 583 aa24.37■■□□□ 1.49
SSBP4-203ENST00000593641 CEP68Q76N32 757 aa24.37■■□□□ 1.49
SSBP4-203ENST00000593641 C1orf127Q8N9H9 656 aa24.37■■□□□ 1.49
SSBP4-203ENST00000593641 LEO1Q8WVC0 666 aaPredicted RBP24.37■■□□□ 1.49
SSBP4-203ENST00000593641 DNAJC19Q96DA6 116 aa24.37■■□□□ 1.49
SSBP4-203ENST00000593641 CLIC6Q96NY7 704 aa24.37■■□□□ 1.49
SSBP4-203ENST00000593641 OLFML3Q9NRN5 406 aa24.37■■□□□ 1.49
SSBP4-203ENST00000593641 TMLHEQ9NVH6 421 aa24.37■■□□□ 1.49
SSBP4-203ENST00000593641 DDX43Q9NXZ2 648 aaKnown RBP24.37■■□□□ 1.49
SSBP4-203ENST00000593641 HMGA1P17096 107 aaKnown RBP24.36■■□□□ 1.49
SSBP4-203ENST00000593641 STAT6P42226 847 aa24.36■■□□□ 1.49
SSBP4-203ENST00000593641 AMPD2Q01433 879 aa24.36■■□□□ 1.49
SSBP4-203ENST00000593641 SRSF5Q13243 272 aaKnown RBP24.36■■□□□ 1.49
SSBP4-203ENST00000593641 CUL4AQ13619 759 aa24.36■■□□□ 1.49
SSBP4-203ENST00000593641 CC2D1AQ6P1N0 951 aaPredicted RBP24.36■■□□□ 1.49
SSBP4-203ENST00000593641 TMEM150AQ86TG1 271 aa24.36■■□□□ 1.49
SSBP4-203ENST00000593641 TMEM86AQ8N2M4 240 aa24.36■■□□□ 1.49
SSBP4-203ENST00000593641 LRRC52Q8N7C0 313 aa24.36■■□□□ 1.49
SSBP4-203ENST00000593641 NOC3LQ8WTT2 800 aaKnown RBP24.36■■□□□ 1.49
SSBP4-203ENST00000593641 ACBD6Q9BR61 282 aa24.36■■□□□ 1.49
SSBP4-203ENST00000593641 ABCB6Q9NP58 842 aa24.36■■□□□ 1.49
SSBP4-203ENST00000593641 TDP1Q9NUW8 608 aa24.36■■□□□ 1.49
SSBP4-203ENST00000593641 UXTQ9UBK9 157 aaPredicted RBP24.36■■□□□ 1.49
SSBP4-203ENST00000593641 ITGA11Q9UKX5 1188 aa24.36■■□□□ 1.49
SSBP4-203ENST00000593641 L1RE1Q9UN81 338 aa24.36■■□□□ 1.49
SSBP4-203ENST00000593641 CCL26Q9Y258 94 aa24.36■■□□□ 1.49
SSBP4-203ENST00000593641 DYNC1LI1Q9Y6G9 523 aaKnown RBP24.36■■□□□ 1.49
SSBP4-203ENST00000593641 CACNA1BQ00975 2339 aa24.36■■□□□ 1.49
SSBP4-203ENST00000593641 SOBPA7XYQ1 873 aa24.35■■□□□ 1.49
SSBP4-203ENST00000593641 F11P03951 625 aa24.35■■□□□ 1.49
SSBP4-203ENST00000593641 KRT19P08727 400 aa24.35■■□□□ 1.49
SSBP4-203ENST00000593641 HOXA6P31267 233 aa24.35■■□□□ 1.49
SSBP4-203ENST00000593641 GPR15P49685 360 aa24.35■■□□□ 1.49
SSBP4-203ENST00000593641 WNT7BP56706 349 aa24.35■■□□□ 1.49
SSBP4-203ENST00000593641 RPL10AP62906 217 aaKnown RBP24.35■■□□□ 1.49
SSBP4-203ENST00000593641 CEBPZQ03701 1054 aaKnown RBP24.35■■□□□ 1.49
SSBP4-203ENST00000593641 GRSF1Q12849 480 aaKnown RBP eCLIP24.35■■□□□ 1.49
SSBP4-203ENST00000593641 RUNX3Q13761 415 aa24.35■■□□□ 1.49
SSBP4-203ENST00000593641 INTS6LQ5JSJ4 861 aaKnown RBP24.35■■□□□ 1.49
SSBP4-203ENST00000593641 CSGALNACT2Q8N6G5 542 aa24.35■■□□□ 1.49
SSBP4-203ENST00000593641 NETO1Q8TDF5 533 aa24.35■■□□□ 1.49
SSBP4-203ENST00000593641 USP13Q92995 863 aaPredicted RBP24.35■■□□□ 1.49
SSBP4-203ENST00000593641 FAM83CQ9BQN1 747 aa24.35■■□□□ 1.49
SSBP4-203ENST00000593641 EBF3Q9H4W6 596 aa24.35■■□□□ 1.49
SSBP4-203ENST00000593641 SEMA4GQ9NTN9 838 aa24.35■■□□□ 1.49
SSBP4-203ENST00000593641 C2orf42Q9NWW7 574 aa24.35■■□□□ 1.49
SSBP4-203ENST00000593641 R3HCC1Q9Y3T6 440 aaKnown RBP24.35■■□□□ 1.49
SSBP4-203ENST00000593641 GREB1Q4ZG55 1949 aa24.35■■□□□ 1.49
SSBP4-203ENST00000593641 ACACBO00763 2458 aa24.35■■□□□ 1.49
SSBP4-203ENST00000593641 CNOT1A5YKK6 2376 aaKnown RBP24.35■■□□□ 1.49
SSBP4-203ENST00000593641 ACAT1P24752 427 aaKnown RBP24.34■■□□□ 1.49
SSBP4-203ENST00000593641 CASP5P51878 434 aa24.34■■□□□ 1.49
SSBP4-203ENST00000593641 TXNDC8Q6A555 127 aa24.34■■□□□ 1.49
SSBP4-203ENST00000593641 TRIM68Q6AZZ1 485 aa24.34■■□□□ 1.49
SSBP4-203ENST00000593641 WDR5BQ86VZ2 330 aa24.34■■□□□ 1.49
SSBP4-203ENST00000593641 STKLD1Q8NE28 680 aa24.34■■□□□ 1.49
SSBP4-203ENST00000593641 ZSWIM2Q8NEG5 633 aa24.34■■□□□ 1.49
SSBP4-203ENST00000593641 TMEM206Q9H813 350 aa24.34■■□□□ 1.49
SSBP4-203ENST00000593641 HPS4Q9NQG7 708 aa24.34■■□□□ 1.49
SSBP4-203ENST00000593641 SNX9Q9Y5X1 595 aa24.34■■□□□ 1.49
SSBP4-203ENST00000593641 ANAPC1Q9H1A4 1944 aa24.33■■□□□ 1.49
SSBP4-203ENST00000593641 DCDC2BA2VCK2 349 aa24.33■■□□□ 1.49
SSBP4-203ENST00000593641 GOLGA8IPA6NC78 632 aa24.33■■□□□ 1.49
SSBP4-203ENST00000593641 GOLGA8JA6NMD2 632 aa24.33■■□□□ 1.49
SSBP4-203ENST00000593641 EXTL3O43909 919 aa24.33■■□□□ 1.49
SSBP4-203ENST00000593641 FOXD2O60548 495 aaPredicted RBP24.33■■□□□ 1.49
SSBP4-203ENST00000593641 ATG13O75143 517 aa24.33■■□□□ 1.49
SSBP4-203ENST00000593641 TMEM191BP0C7N4 346 aa24.33■■□□□ 1.49
SSBP4-203ENST00000593641 RESTQ13127 1097 aa24.33■■□□□ 1.49
SSBP4-203ENST00000593641 CSRP2Q16527 193 aa24.33■■□□□ 1.49
SSBP4-203ENST00000593641 DDR2Q16832 855 aa24.33■■□□□ 1.49
SSBP4-203ENST00000593641 SDHAF4Q5VUM1 108 aa24.33■■□□□ 1.49
SSBP4-203ENST00000593641 PRR23CQ6ZRP0 262 aa24.33■■□□□ 1.49
SSBP4-203ENST00000593641 MON1AQ86VX9 555 aa24.33■■□□□ 1.49
SSBP4-203ENST00000593641 SPATA18Q8TC71 538 aa24.33■■□□□ 1.49
SSBP4-203ENST00000593641 CBWD1Q9BRT8 395 aa24.33■■□□□ 1.49
SSBP4-203ENST00000593641 PANK4Q9NVE7 773 aa24.33■■□□□ 1.49
SSBP4-203ENST00000593641 LOC105378220A0A1B0GUY1 285 aaPredicted RBP24.32■■□□□ 1.48
SSBP4-203ENST00000593641 FRMD3A2A2Y4 597 aa24.32■■□□□ 1.48
SSBP4-203ENST00000593641 CYP2F1P24903 491 aa24.32■■□□□ 1.48
SSBP4-203ENST00000593641 PCSK1P29120 753 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms