RNA–Protein interactions for RNA: ENST00000592909.1

SMCO4P1-201, Transcript of single-pass membrane protein with coiled-coil domains 4 pseudogene 1, humanhuman

BASIC

Gene SMCO4P1, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4P1-201ENST00000592909 PDZD3Q86UT5 571 aa10.97□□□□□ -0.65
SMCO4P1-201ENST00000592909 SYT12Q8IV01 421 aa10.97□□□□□ -0.65
SMCO4P1-201ENST00000592909 MDGA1Q8NFP4 955 aa10.97□□□□□ -0.65
SMCO4P1-201ENST00000592909 SPPL2BQ8TCT7 592 aa10.97□□□□□ -0.65
SMCO4P1-201ENST00000592909 OSCP1Q8WVF1 389 aa10.97□□□□□ -0.65
SMCO4P1-201ENST00000592909 SPIRE2Q8WWL2 714 aa10.97□□□□□ -0.65
SMCO4P1-201ENST00000592909 MRPS31Q92665 395 aaKnown RBP10.97□□□□□ -0.65
SMCO4P1-201ENST00000592909 DDX19AQ9NUU7 478 aaKnown RBP10.97□□□□□ -0.65
SMCO4P1-201ENST00000592909 DUS2Q9NX74 493 aaKnown RBP10.97□□□□□ -0.65
SMCO4P1-201ENST00000592909 STK24Q9Y6E0 443 aa10.97□□□□□ -0.65
SMCO4P1-201ENST00000592909 LACTBL1A8MY62 500 aa10.96□□□□□ -0.65
SMCO4P1-201ENST00000592909 PIRO00625 290 aa10.96□□□□□ -0.65
SMCO4P1-201ENST00000592909 PPEF2O14830 753 aa10.96□□□□□ -0.65
SMCO4P1-201ENST00000592909 NMT1P30419 496 aaKnown RBP10.96□□□□□ -0.65
SMCO4P1-201ENST00000592909 HOXD12P35452 270 aa10.96□□□□□ -0.65
SMCO4P1-201ENST00000592909 MAPK8P45983 427 aa10.96□□□□□ -0.65
SMCO4P1-201ENST00000592909 FXR2P51116 673 aaKnown RBP eCLIP10.96□□□□□ -0.65
SMCO4P1-201ENST00000592909 GUCY2FP51841 1108 aa10.96□□□□□ -0.65
SMCO4P1-201ENST00000592909 FAM160A1Q05DH4 1040 aa10.96□□□□□ -0.65
SMCO4P1-201ENST00000592909 PPP2R3AQ06190 1150 aa10.96□□□□□ -0.65
SMCO4P1-201ENST00000592909 NR1H3Q13133 447 aa10.96□□□□□ -0.65
SMCO4P1-201ENST00000592909 HNRNPDQ14103 355 aaKnown RBP10.96□□□□□ -0.65
SMCO4P1-201ENST00000592909 PDIA5Q14554 519 aa10.96□□□□□ -0.65
SMCO4P1-201ENST00000592909 ZNF174Q15697 407 aa10.96□□□□□ -0.65
SMCO4P1-201ENST00000592909 CRY1Q16526 586 aa10.96□□□□□ -0.65
SMCO4P1-201ENST00000592909 KYAT1Q16773 422 aa10.96□□□□□ -0.65
SMCO4P1-201ENST00000592909 ZNF423Q2M1K9 1284 aa10.96□□□□□ -0.65
SMCO4P1-201ENST00000592909 EML3Q32P44 896 aa10.96□□□□□ -0.65
SMCO4P1-201ENST00000592909 SPDYCQ5MJ68 293 aa10.96□□□□□ -0.65
SMCO4P1-201ENST00000592909 PEAR1Q5VY43 1037 aaPredicted RBP10.96□□□□□ -0.65
SMCO4P1-201ENST00000592909 RINT1Q6NUQ1 792 aa10.96□□□□□ -0.65
SMCO4P1-201ENST00000592909 C19orf48Q6RUI8 117 aa10.96□□□□□ -0.65
SMCO4P1-201ENST00000592909 C1orf186Q6ZWK4 172 aa10.96□□□□□ -0.65
SMCO4P1-201ENST00000592909 LRRTM3Q86VH5 581 aa10.96□□□□□ -0.65
SMCO4P1-201ENST00000592909 CHCHD4Q8N4Q1 142 aa10.96□□□□□ -0.65
SMCO4P1-201ENST00000592909 TMEM161BQ8NDZ6 487 aa10.96□□□□□ -0.65
SMCO4P1-201ENST00000592909 ATP2A3Q93084 1043 aa10.96□□□□□ -0.65
SMCO4P1-201ENST00000592909 YTHDC1Q96MU7 727 aaKnown RBP10.96□□□□□ -0.65
SMCO4P1-201ENST00000592909 TIPINQ9BVW5 301 aa10.96□□□□□ -0.65
SMCO4P1-201ENST00000592909 HAPLN2Q9GZV7 340 aa10.96□□□□□ -0.65
SMCO4P1-201ENST00000592909 TMEM74BQ9NUR3 256 aa10.96□□□□□ -0.65
SMCO4P1-201ENST00000592909 LRWD1Q9UFC0 647 aa10.96□□□□□ -0.65
SMCO4P1-201ENST00000592909 DSEQ9UL01 958 aa10.96□□□□□ -0.65
SMCO4P1-201ENST00000592909 MMP17Q9ULZ9 603 aa10.96□□□□□ -0.65
SMCO4P1-201ENST00000592909 DNM3Q9UQ16 869 aa10.96□□□□□ -0.65
SMCO4P1-201ENST00000592909 GON4LQ3T8J9 2241 aa10.96□□□□□ -0.66
SMCO4P1-201ENST00000592909 KIF26AQ9ULI4 1882 aaPredicted RBP10.95□□□□□ -0.66
SMCO4P1-201ENST00000592909 LAMA1P25391 3075 aa10.95□□□□□ -0.66
SMCO4P1-201ENST00000592909 SETXQ7Z333 2677 aaKnown RBP10.95□□□□□ -0.66
SMCO4P1-201ENST00000592909 K7EQS6 105 aa10.95□□□□□ -0.66
SMCO4P1-201ENST00000592909 ALDH1A2O94788 518 aa10.95□□□□□ -0.66
SMCO4P1-201ENST00000592909 CSH1P0DML2 217 aa10.95□□□□□ -0.66
SMCO4P1-201ENST00000592909 CSH2P0DML3 217 aa10.95□□□□□ -0.66
SMCO4P1-201ENST00000592909 MAPTP10636 758 aaKnown RBP10.95□□□□□ -0.66
SMCO4P1-201ENST00000592909 P2RY2P41231 377 aa10.95□□□□□ -0.66
SMCO4P1-201ENST00000592909 TNFSF9P41273 254 aa10.95□□□□□ -0.66
SMCO4P1-201ENST00000592909 PTGER3P43115 390 aa10.95□□□□□ -0.66
SMCO4P1-201ENST00000592909 IFNAR2P48551 515 aa10.95□□□□□ -0.66
SMCO4P1-201ENST00000592909 MRPS21P82921 87 aaKnown RBP10.95□□□□□ -0.66
SMCO4P1-201ENST00000592909 SCAPQ12770 1279 aa10.95□□□□□ -0.66
SMCO4P1-201ENST00000592909 TRIM29Q14134 588 aa10.95□□□□□ -0.66
SMCO4P1-201ENST00000592909 ZNF77Q15935 545 aa10.95□□□□□ -0.66
SMCO4P1-201ENST00000592909 ENOX2Q16206 610 aaKnown RBP10.95□□□□□ -0.66
SMCO4P1-201ENST00000592909 C9orf57Q5W0N0 161 aa10.95□□□□□ -0.66
SMCO4P1-201ENST00000592909 METTL23Q86XA0 190 aa10.95□□□□□ -0.66
SMCO4P1-201ENST00000592909 CD302Q8IX05 232 aa10.95□□□□□ -0.66
SMCO4P1-201ENST00000592909 THEM5Q8N1Q8 247 aa10.95□□□□□ -0.66
SMCO4P1-201ENST00000592909 HDDC3Q8N4P3 179 aa10.95□□□□□ -0.66
SMCO4P1-201ENST00000592909 NSUN7Q8NE18 718 aaKnown RBP10.95□□□□□ -0.66
SMCO4P1-201ENST00000592909 KCNN1Q92952 543 aa10.95□□□□□ -0.66
SMCO4P1-201ENST00000592909 FNBP1Q96RU3 617 aa10.95□□□□□ -0.66
SMCO4P1-201ENST00000592909 RUSC1Q9BVN2 902 aa10.95□□□□□ -0.66
SMCO4P1-201ENST00000592909 TMEM206Q9H813 350 aa10.95□□□□□ -0.66
SMCO4P1-201ENST00000592909 MBD1Q9UIS9 605 aaPredicted RBP10.95□□□□□ -0.66
SMCO4P1-201ENST00000592909 PILRBQ9UKJ0 227 aa10.95□□□□□ -0.66
SMCO4P1-201ENST00000592909 CITO14578 2027 aa10.94□□□□□ -0.66
SMCO4P1-201ENST00000592909 NUP205Q92621 2012 aa10.94□□□□□ -0.66
SMCO4P1-201ENST00000592909 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.94□□□□□ -0.66
SMCO4P1-201ENST00000592909 ANO9A1A5B4 782 aa10.94□□□□□ -0.66
SMCO4P1-201ENST00000592909 SFI1A8K8P3 1242 aa10.94□□□□□ -0.66
SMCO4P1-201ENST00000592909 E9PMD0 336 aa10.94□□□□□ -0.66
SMCO4P1-201ENST00000592909 FAM189A1O60320 539 aa10.94□□□□□ -0.66
SMCO4P1-201ENST00000592909 PLS3P13797 630 aa10.94□□□□□ -0.66
SMCO4P1-201ENST00000592909 TCF3P15923 654 aa10.94□□□□□ -0.66
SMCO4P1-201ENST00000592909 GUCY2CP25092 1073 aa10.94□□□□□ -0.66
SMCO4P1-201ENST00000592909 OPRD1P41143 372 aa10.94□□□□□ -0.66
SMCO4P1-201ENST00000592909 MATR3P43243 847 aaKnown RBP eCLIP10.94□□□□□ -0.66
SMCO4P1-201ENST00000592909 CDR1P51861 262 aa10.94□□□□□ -0.66
SMCO4P1-201ENST00000592909 SMTNP53814 917 aa10.94□□□□□ -0.66
SMCO4P1-201ENST00000592909 ATXN3P54252 364 aaPredicted RBP10.94□□□□□ -0.66
SMCO4P1-201ENST00000592909 FAM193AP78312 1265 aa10.94□□□□□ -0.66
SMCO4P1-201ENST00000592909 USP4Q13107 963 aa10.94□□□□□ -0.66
SMCO4P1-201ENST00000592909 ANKRD1Q15327 319 aa10.94□□□□□ -0.66
SMCO4P1-201ENST00000592909 COL28A1Q2UY09 1125 aa10.94□□□□□ -0.66
SMCO4P1-201ENST00000592909 C2orf27AQ580R0 203 aa10.94□□□□□ -0.66
SMCO4P1-201ENST00000592909 LMBRD2Q68DH5 695 aaPredicted RBP10.94□□□□□ -0.66
SMCO4P1-201ENST00000592909 TMEM92Q6UXU6 159 aa10.94□□□□□ -0.66
SMCO4P1-201ENST00000592909 TMEFF1Q8IYR6 380 aa10.94□□□□□ -0.66
SMCO4P1-201ENST00000592909 DCP1BQ8IZD4 617 aaKnown RBP10.94□□□□□ -0.66
SMCO4P1-201ENST00000592909 C4orf32Q8N8J7 132 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms