RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 LRRN2O75325 713 aa12.82□□□□□ -0.36
SMARCA4-217ENST00000591595 CCDC159P0C7I6 412 aa12.82□□□□□ -0.36
SMARCA4-217ENST00000591595 CYP2J2P51589 502 aa12.82□□□□□ -0.36
SMARCA4-217ENST00000591595 CD300CQ08708 224 aa12.82□□□□□ -0.36
SMARCA4-217ENST00000591595 RASA2Q15283 850 aa12.82□□□□□ -0.36
SMARCA4-217ENST00000591595 DCDC5Q6ZRR9 648 aa12.82□□□□□ -0.36
SMARCA4-217ENST00000591595 ANKRD42Q8N9B4 389 aa12.82□□□□□ -0.36
SMARCA4-217ENST00000591595 SLC35C1Q96A29 364 aa12.82□□□□□ -0.36
SMARCA4-217ENST00000591595 C8orf48Q96LL4 319 aa12.82□□□□□ -0.36
SMARCA4-217ENST00000591595 RABGAP1Q9Y3P9 1069 aa12.82□□□□□ -0.36
SMARCA4-217ENST00000591595 TMEM120BA0PK00 339 aa12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 BHMG1C9JSJ3 638 aaPredicted RBP12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 AP3B1O00203 1094 aa12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 PFDN6O15212 129 aa12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 DCTN3O75935 186 aa12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 DDHD2O94830 711 aa12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 HAUS5O94927 633 aa12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 CHEK2O96017 543 aa12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 TFAP2AP05549 437 aa12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 IL1R1P14778 569 aa12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 GLULP15104 373 aa12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 KRT4P19013 534 aa12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 TNFAIP3P21580 790 aa12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 HOXA13P31271 388 aaPredicted RBP12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 STT3AP46977 705 aa12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 EPHA7Q15375 998 aa12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 MAP3K21Q5TCX8 1036 aa12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 SLFN13Q68D06 897 aa12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 PRR5LQ6MZQ0 368 aa12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 TPH2Q8IWU9 490 aa12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 SLC35G2Q8TBE7 412 aa12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 PPP4R1Q8TF05 950 aa12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 PABPC3Q9H361 631 aaKnown RBP12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 LAMB2P55268 1798 aa12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 BTNL10A8MVZ5 291 aa12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 ESRRAP11474 423 aaPredicted RBP12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 PPARGP37231 505 aaPredicted RBP12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 CACNB3P54284 484 aa12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 NOP14P78316 857 aaKnown RBP12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 DR1Q01658 176 aa12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 KCNJ8Q15842 424 aa12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 SLC30A10Q6XR72 485 aa12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 PPP1R21Q6ZMI0 780 aa12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 BARGINQ6ZT62 677 aa12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 NT5DC3Q86UY8 548 aa12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 KSR1Q8IVT5 923 aa12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 PTCD2Q8WV60 388 aaKnown RBP12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 EPB41L4BQ9H329 900 aa12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 GAKO14976 1311 aa12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 PEX14O75381 377 aa12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 FARP2O94887 1054 aaPredicted RBP12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 KRT75O95678 551 aa12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 SMIM18P0DKX4 95 aa12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 TAL1P17542 331 aaPredicted RBP12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 RPA1P27694 616 aa12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 NMT1P30419 496 aaKnown RBP12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 CHN2P52757 468 aa12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 GABPAQ06546 454 aa12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 THOC5Q13769 683 aaKnown RBP12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 DRAP1Q14919 205 aaPredicted RBP12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 COL19A1Q14993 1142 aa12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 CROCCP2Q86T23 111 aa12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 PIP4K2CQ8TBX8 421 aa12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 OSCP1Q8WVF1 389 aa12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 GLG1Q92896 1179 aa12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 NGLY1Q96IV0 654 aa12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 CTRCQ99895 268 aa12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 RUSC1Q9BVN2 902 aa12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 PITPNM3Q9BZ71 974 aa12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 SIAEQ9HAT2 523 aa12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 PALMDQ9NP74 551 aa12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 NDE1Q9NXR1 346 aa12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 CRNNQ9UBG3 495 aaPredicted RBP12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 KLHL3Q9UH77 587 aa12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 DNAJC12Q9UKB3 198 aa12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 SNX24Q9Y343 169 aa12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 NR2E1Q9Y466 385 aa12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 PCDHGA3Q9Y5H0 932 aa12.81□□□□□ -0.36
SMARCA4-217ENST00000591595 STAMBPO95630 424 aa12.8□□□□□ -0.36
SMARCA4-217ENST00000591595 SHMT1P34896 483 aa12.8□□□□□ -0.36
SMARCA4-217ENST00000591595 ASPHQ12797 758 aa12.8□□□□□ -0.36
SMARCA4-217ENST00000591595 CTTNQ14247 550 aaKnown RBP12.8□□□□□ -0.36
SMARCA4-217ENST00000591595 SF3B4Q15427 424 aaKnown RBP eCLIP12.8□□□□□ -0.363e-7■■■■■ 29
SMARCA4-217ENST00000591595 TRIM71Q2Q1W2 868 aaKnown RBP12.8□□□□□ -0.36
SMARCA4-217ENST00000591595 RASSF3Q86WH2 238 aa12.8□□□□□ -0.36
SMARCA4-217ENST00000591595 SLC38A6Q8IZM9 456 aa12.8□□□□□ -0.36
SMARCA4-217ENST00000591595 METTL25Q8N6Q8 603 aa12.8□□□□□ -0.36
SMARCA4-217ENST00000591595 EPS8L3Q8TE67 593 aaKnown RBP12.8□□□□□ -0.36
SMARCA4-217ENST00000591595 MCUR1Q96AQ8 359 aa12.8□□□□□ -0.36
SMARCA4-217ENST00000591595 C8orf37Q96NL8 207 aa12.8□□□□□ -0.36
SMARCA4-217ENST00000591595 TXLNGYQ9BZA5 131 aa12.8□□□□□ -0.36
SMARCA4-217ENST00000591595 ZC3H12CQ9C0D7 883 aaKnown RBP12.8□□□□□ -0.36
SMARCA4-217ENST00000591595 GRIP2Q9C0E4 1043 aa12.8□□□□□ -0.36
SMARCA4-217ENST00000591595 BCS1LQ9Y276 419 aa12.8□□□□□ -0.36
SMARCA4-217ENST00000591595 STXBP5LQ9Y2K9 1186 aa12.8□□□□□ -0.36
SMARCA4-217ENST00000591595 MAD1L1Q9Y6D9 718 aa12.8□□□□□ -0.36
SMARCA4-217ENST00000591595 K7EPI3 171 aa12.8□□□□□ -0.36
SMARCA4-217ENST00000591595 GUCY1B2O75343 617 aa12.8□□□□□ -0.36
SMARCA4-217ENST00000591595 TRIM49P0CI25 452 aa12.8□□□□□ -0.36
SMARCA4-217ENST00000591595 TRIM49CP0CI26 452 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms