RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 EFCAB13Q8IY85 973 aa6.91□□□□□ -1.3
VPS4B-205ENST00000591383 MICALL1Q8N3F8 863 aa6.91□□□□□ -1.3
VPS4B-205ENST00000591383 CSGALNACT2Q8N6G5 542 aa6.91□□□□□ -1.3
VPS4B-205ENST00000591383 MLKLQ8NB16 471 aa6.91□□□□□ -1.3
VPS4B-205ENST00000591383 PHC3Q8NDX5 983 aa6.91□□□□□ -1.3
VPS4B-205ENST00000591383 BEST2Q8NFU1 509 aa6.91□□□□□ -1.3
VPS4B-205ENST00000591383 RSPH1Q8WYR4 309 aa6.91□□□□□ -1.3
VPS4B-205ENST00000591383 TMEM169Q96HH4 297 aa6.91□□□□□ -1.3
VPS4B-205ENST00000591383 DHTKD1Q96HY7 919 aaPredicted RBP6.91□□□□□ -1.3
VPS4B-205ENST00000591383 ZMAT2Q96NC0 199 aaKnown RBP6.91□□□□□ -1.3
VPS4B-205ENST00000591383 PPP1R10Q96QC0 940 aaKnown RBP6.91□□□□□ -1.3
VPS4B-205ENST00000591383 CGRRF1Q99675 332 aa6.91□□□□□ -1.3
VPS4B-205ENST00000591383 C11orf84Q9BUA3 381 aaPredicted RBP6.91□□□□□ -1.3
VPS4B-205ENST00000591383 ZNF576Q9H609 170 aa6.91□□□□□ -1.3
VPS4B-205ENST00000591383 NRDE2Q9H7Z3 1164 aa6.91□□□□□ -1.3
VPS4B-205ENST00000591383 KIAA1586Q9HCI6 787 aa6.91□□□□□ -1.3
VPS4B-205ENST00000591383 PDE11AQ9HCR9 933 aa6.91□□□□□ -1.3
VPS4B-205ENST00000591383 DNMT3LQ9UJW3 386 aa6.91□□□□□ -1.3
VPS4B-205ENST00000591383 TRAF3IP3Q9Y228 551 aa6.91□□□□□ -1.3
VPS4B-205ENST00000591383 TLR6Q9Y2C9 796 aa6.91□□□□□ -1.3
VPS4B-205ENST00000591383 RWDD3Q9Y3V2 267 aa6.91□□□□□ -1.3
VPS4B-205ENST00000591383 PCDHB12Q9Y5F1 795 aa6.91□□□□□ -1.3
VPS4B-205ENST00000591383 PTPRJQ12913 1337 aa6.91□□□□□ -1.3
VPS4B-205ENST00000591383 SMIM28A0A1B0GU29 152 aa6.9□□□□□ -1.3
VPS4B-205ENST00000591383 EPOPA6NHQ4 379 aa6.9□□□□□ -1.3
VPS4B-205ENST00000591383 KHNYNO15037 678 aaKnown RBP6.9□□□□□ -1.3
VPS4B-205ENST00000591383 INPPL1O15357 1258 aa6.9□□□□□ -1.3
VPS4B-205ENST00000591383 SLC16A3O15427 465 aaKnown RBP6.9□□□□□ -1.3
VPS4B-205ENST00000591383 GREM1O60565 184 aa6.9□□□□□ -1.3
VPS4B-205ENST00000591383 AKAP3O75969 853 aa6.9□□□□□ -1.3
VPS4B-205ENST00000591383 FGF18O76093 207 aa6.9□□□□□ -1.3
VPS4B-205ENST00000591383 DDHD2O94830 711 aa6.9□□□□□ -1.3
VPS4B-205ENST00000591383 TNNC2P02585 160 aa6.9□□□□□ -1.3
VPS4B-205ENST00000591383 PF4P02776 101 aa6.9□□□□□ -1.3
VPS4B-205ENST00000591383 KRT19P08727 400 aa6.9□□□□□ -1.3
VPS4B-205ENST00000591383 CELA3AP09093 270 aa6.9□□□□□ -1.3
VPS4B-205ENST00000591383 CCDC192P0DO97 292 aa6.9□□□□□ -1.3
VPS4B-205ENST00000591383 KCNE1P15382 129 aa6.9□□□□□ -1.3
VPS4B-205ENST00000591383 TNNI1P19237 187 aa6.9□□□□□ -1.3
VPS4B-205ENST00000591383 ETFBP38117 255 aa6.9□□□□□ -1.3
VPS4B-205ENST00000591383 PIK3CAP42336 1068 aa6.9□□□□□ -1.3
VPS4B-205ENST00000591383 GRIA4P48058 902 aa6.9□□□□□ -1.3
VPS4B-205ENST00000591383 SOX9P48436 509 aa6.9□□□□□ -1.3
VPS4B-205ENST00000591383 ALDH7A1P49419 539 aaKnown RBP6.9□□□□□ -1.3
VPS4B-205ENST00000591383 LIG3P49916 1009 aa6.9□□□□□ -1.3
VPS4B-205ENST00000591383 TNP2Q05952 138 aa6.9□□□□□ -1.3
VPS4B-205ENST00000591383 DSC1Q08554 894 aa6.9□□□□□ -1.3
VPS4B-205ENST00000591383 HYAL2Q12891 473 aa6.9□□□□□ -1.3
VPS4B-205ENST00000591383 BFSP1Q12934 665 aa6.9□□□□□ -1.3
VPS4B-205ENST00000591383 MMRN1Q13201 1228 aa6.9□□□□□ -1.3
VPS4B-205ENST00000591383 ADAM9Q13443 819 aa6.9□□□□□ -1.3
VPS4B-205ENST00000591383 BIRC3Q13489 604 aa6.9□□□□□ -1.3
VPS4B-205ENST00000591383 GRIN2CQ14957 1233 aa6.9□□□□□ -1.3
VPS4B-205ENST00000591383 PSMD6Q15008 389 aa6.9□□□□□ -1.3
VPS4B-205ENST00000591383 EPC2Q52LR7 807 aa6.9□□□□□ -1.3
VPS4B-205ENST00000591383 CENPPQ6IPU0 288 aa6.9□□□□□ -1.3
VPS4B-205ENST00000591383 TTI2Q6NXR4 508 aa6.9□□□□□ -1.3
VPS4B-205ENST00000591383 FIGNL1Q6PIW4 674 aa6.9□□□□□ -1.3
VPS4B-205ENST00000591383 KCNT2Q6UVM3 1135 aa6.9□□□□□ -1.3
VPS4B-205ENST00000591383 TMEM173Q86WV6 379 aaPredicted RBP6.9□□□□□ -1.3
VPS4B-205ENST00000591383 CREBRFQ8IUR6 639 aa6.9□□□□□ -1.3
VPS4B-205ENST00000591383 WDR49Q8IV35 697 aa6.9□□□□□ -1.3
VPS4B-205ENST00000591383 CD302Q8IX05 232 aa6.9□□□□□ -1.3
VPS4B-205ENST00000591383 SLC39A11Q8N1S5 342 aa6.9□□□□□ -1.3
VPS4B-205ENST00000591383 AOPEPQ8N6M6 819 aa6.9□□□□□ -1.3
VPS4B-205ENST00000591383 KLHL23Q8NBE8 558 aa6.9□□□□□ -1.3
VPS4B-205ENST00000591383 BCL7CQ8WUZ0 217 aaPredicted RBP6.9□□□□□ -1.3
VPS4B-205ENST00000591383 ANKRD36BP1Q96IX9 119 aa6.9□□□□□ -1.3
VPS4B-205ENST00000591383 CNOT6LQ96LI5 555 aaKnown RBP6.9□□□□□ -1.3
VPS4B-205ENST00000591383 ZNF560Q96MR9 790 aa6.9□□□□□ -1.3
VPS4B-205ENST00000591383 SAMD11Q96NU1 681 aa6.9□□□□□ -1.3
VPS4B-205ENST00000591383 PAAF1Q9BRP4 392 aa6.9□□□□□ -1.3
VPS4B-205ENST00000591383 TMEM175Q9BSA9 504 aa6.9□□□□□ -1.3
VPS4B-205ENST00000591383 PRDM12Q9H4Q4 367 aa6.9□□□□□ -1.3
VPS4B-205ENST00000591383 CWH43Q9H720 699 aa6.9□□□□□ -1.3
VPS4B-205ENST00000591383 PLEKHA5Q9HAU0 1116 aa6.9□□□□□ -1.3
VPS4B-205ENST00000591383 ZFYVE1Q9HBF4 777 aa6.9□□□□□ -1.3
VPS4B-205ENST00000591383 ENTPD7Q9NQZ7 604 aa6.9□□□□□ -1.3
VPS4B-205ENST00000591383 MIOSQ9NXC5 875 aa6.9□□□□□ -1.3
VPS4B-205ENST00000591383 SPG21Q9NZD8 308 aa6.9□□□□□ -1.3
VPS4B-205ENST00000591383 RWDD2AQ9UIY3 292 aa6.9□□□□□ -1.3
VPS4B-205ENST00000591383 UBQLN1Q9UMX0 589 aaKnown RBP6.9□□□□□ -1.3
VPS4B-205ENST00000591383 FAN1Q9Y2M0 1017 aa6.9□□□□□ -1.3
VPS4B-205ENST00000591383 R3HCC1Q9Y3T6 440 aaKnown RBP6.9□□□□□ -1.3
VPS4B-205ENST00000591383 C2CD2Q9Y426 696 aa6.9□□□□□ -1.3
VPS4B-205ENST00000591383 NUB1Q9Y5A7 615 aa6.9□□□□□ -1.3
VPS4B-205ENST00000591383 PCDHGC4Q9Y5F7 938 aa6.9□□□□□ -1.3
VPS4B-205ENST00000591383 SF3B1O75533 1304 aaKnown RBP eCLIP6.9□□□□□ -1.3
VPS4B-205ENST00000591383 VWA8A3KMH1 1905 aa6.89□□□□□ -1.31
VPS4B-205ENST00000591383 SCN1AP35498 2009 aa6.89□□□□□ -1.31
VPS4B-205ENST00000591383 TMEM265A0A087WTH1 108 aa6.89□□□□□ -1.31
VPS4B-205ENST00000591383 DCDC2BA2VCK2 349 aa6.89□□□□□ -1.31
VPS4B-205ENST00000591383 LRRIQ3A6PVS8 624 aaPredicted RBP6.89□□□□□ -1.31
VPS4B-205ENST00000591383 I3L4J1 428 aa6.89□□□□□ -1.31
VPS4B-205ENST00000591383 RFXAPO00287 272 aa6.89□□□□□ -1.31
VPS4B-205ENST00000591383 PES1O00541 588 aaKnown RBP6.89□□□□□ -1.31
VPS4B-205ENST00000591383 NRP1O14786 923 aa6.89□□□□□ -1.31
VPS4B-205ENST00000591383 PPEF2O14830 753 aa6.89□□□□□ -1.31
VPS4B-205ENST00000591383 LETM1O95202 739 aaPredicted RBP6.89□□□□□ -1.31
VPS4B-205ENST00000591383 FGFR1OPO95684 399 aaKnown RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms