RNA–Protein interactions for RNA: ENST00000590422.1

CTIF-208, Transcript of cap binding complex dependent translation initiation factor, humanhuman

TSL 3

Gene CTIF, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTIF-208ENST00000590422 ZNF560Q96MR9 790 aa13.04□□□□□ -0.32
CTIF-208ENST00000590422 GCNAQ96QF7 691 aa13.04□□□□□ -0.32
CTIF-208ENST00000590422 PKMYT1Q99640 499 aa13.04□□□□□ -0.32
CTIF-208ENST00000590422 CBWD1Q9BRT8 395 aa13.04□□□□□ -0.32
CTIF-208ENST00000590422 PI4K2AQ9BTU6 479 aa13.04□□□□□ -0.32
CTIF-208ENST00000590422 HPS4Q9NQG7 708 aa13.04□□□□□ -0.32
CTIF-208ENST00000590422 SEL1LQ9UBV2 794 aa13.04□□□□□ -0.32
CTIF-208ENST00000590422 CDV3Q9UKY7 258 aaKnown RBP13.04□□□□□ -0.32
CTIF-208ENST00000590422 SRPRBQ9Y5M8 271 aaKnown RBP13.04□□□□□ -0.32
CTIF-208ENST00000590422 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.04□□□□□ -0.32
CTIF-208ENST00000590422 KIAA1549LQ6ZVL6 1849 aa13.04□□□□□ -0.32
CTIF-208ENST00000590422 PTPRDP23468 1912 aa13.03□□□□□ -0.32
CTIF-208ENST00000590422 FRMD3A2A2Y4 597 aa13.03□□□□□ -0.32
CTIF-208ENST00000590422 EXTL3O43909 919 aa13.03□□□□□ -0.32
CTIF-208ENST00000590422 F11P03951 625 aa13.03□□□□□ -0.32
CTIF-208ENST00000590422 GAP43P17677 238 aa13.03□□□□□ -0.32
CTIF-208ENST00000590422 PLCB2Q00722 1185 aa13.03□□□□□ -0.32
CTIF-208ENST00000590422 SMARCB1Q12824 385 aa13.03□□□□□ -0.32
CTIF-208ENST00000590422 SIM2Q14190 667 aaPredicted RBP13.03□□□□□ -0.32
CTIF-208ENST00000590422 POSTNQ15063 836 aa13.03□□□□□ -0.32
CTIF-208ENST00000590422 ITPRIPL2Q3MIP1 535 aa13.03□□□□□ -0.32
CTIF-208ENST00000590422 DGKKQ5KSL6 1271 aa13.03□□□□□ -0.32
CTIF-208ENST00000590422 RRAGBQ5VZM2 374 aa13.03□□□□□ -0.32
CTIF-208ENST00000590422 NAIF1Q69YI7 327 aaPredicted RBP13.03□□□□□ -0.32
CTIF-208ENST00000590422 TXNDC8Q6A555 127 aa13.03□□□□□ -0.32
CTIF-208ENST00000590422 OSTM1Q86WC4 334 aa13.03□□□□□ -0.32
CTIF-208ENST00000590422 GPR161Q8N6U8 529 aaKnown RBP13.03□□□□□ -0.32
CTIF-208ENST00000590422 MAB21L3Q8N8X9 362 aa13.03□□□□□ -0.32
CTIF-208ENST00000590422 GLIS3Q8NEA6 775 aa13.03□□□□□ -0.32
CTIF-208ENST00000590422 ACCSQ96QU6 501 aa13.03□□□□□ -0.32
CTIF-208ENST00000590422 FAM83CQ9BQN1 747 aa13.03□□□□□ -0.32
CTIF-208ENST00000590422 MTMR12Q9C0I1 747 aa13.03□□□□□ -0.32
CTIF-208ENST00000590422 EBF3Q9H4W6 596 aa13.03□□□□□ -0.32
CTIF-208ENST00000590422 PDE11AQ9HCR9 933 aa13.03□□□□□ -0.32
CTIF-208ENST00000590422 GKN1Q9NS71 199 aa13.03□□□□□ -0.32
CTIF-208ENST00000590422 RBAKQ9NYW8 714 aaPredicted RBP13.03□□□□□ -0.32
CTIF-208ENST00000590422 SIX4Q9UIU6 781 aa13.03□□□□□ -0.32
CTIF-208ENST00000590422 RAB23Q9ULC3 237 aa13.03□□□□□ -0.32
CTIF-208ENST00000590422 AGAP1Q9UPQ3 857 aa13.03□□□□□ -0.32
CTIF-208ENST00000590422 PCDHB5Q9Y5E4 795 aa13.03□□□□□ -0.32
CTIF-208ENST00000590422 CACNA1BQ00975 2339 aa13.03□□□□□ -0.32
CTIF-208ENST00000590422 PTPRJQ12913 1337 aa13.03□□□□□ -0.32
CTIF-208ENST00000590422 HELZP42694 1942 aaKnown RBP13.03□□□□□ -0.32
CTIF-208ENST00000590422 ACACBO00763 2458 aa13.02□□□□□ -0.32
CTIF-208ENST00000590422 DCDC2BA2VCK2 349 aa13.02□□□□□ -0.33
CTIF-208ENST00000590422 PRPF40AO75400 957 aaKnown RBP13.02□□□□□ -0.33
CTIF-208ENST00000590422 IDEP14735 1019 aa13.02□□□□□ -0.33
CTIF-208ENST00000590422 ARSAP15289 507 aa13.02□□□□□ -0.33
CTIF-208ENST00000590422 SYT1P21579 422 aa13.02□□□□□ -0.33
CTIF-208ENST00000590422 CYP2F1P24903 491 aa13.02□□□□□ -0.33
CTIF-208ENST00000590422 PNPLA4P41247 253 aa13.02□□□□□ -0.33
CTIF-208ENST00000590422 TSPY1Q01534 308 aa13.02□□□□□ -0.33
CTIF-208ENST00000590422 BFSP1Q12934 665 aa13.02□□□□□ -0.33
CTIF-208ENST00000590422 TAF12Q16514 161 aa13.02□□□□□ -0.33
CTIF-208ENST00000590422 DDR2Q16832 855 aa13.02□□□□□ -0.33
CTIF-208ENST00000590422 INTS6LQ5JSJ4 861 aaKnown RBP13.02□□□□□ -0.33
CTIF-208ENST00000590422 LMBRD2Q68DH5 695 aaPredicted RBP13.02□□□□□ -0.33
CTIF-208ENST00000590422 FSTL4Q6MZW2 842 aa13.02□□□□□ -0.33
CTIF-208ENST00000590422 SV2BQ7L1I2 683 aa13.02□□□□□ -0.33
CTIF-208ENST00000590422 LONP2Q86WA8 852 aa13.02□□□□□ -0.33
CTIF-208ENST00000590422 NT5DC4Q86YG4 428 aa13.02□□□□□ -0.33
CTIF-208ENST00000590422 DCP1BQ8IZD4 617 aaKnown RBP13.02□□□□□ -0.33
CTIF-208ENST00000590422 LEO1Q8WVC0 666 aaPredicted RBP13.02□□□□□ -0.33
CTIF-208ENST00000590422 SNX21Q969T3 373 aa13.02□□□□□ -0.33
CTIF-208ENST00000590422 USP28Q96RU2 1077 aa13.02□□□□□ -0.33
CTIF-208ENST00000590422 PANK2Q9BZ23 570 aa13.02□□□□□ -0.33
CTIF-208ENST00000590422 PCIF1Q9H4Z3 704 aa13.02□□□□□ -0.33
CTIF-208ENST00000590422 OLFML3Q9NRN5 406 aa13.02□□□□□ -0.33
CTIF-208ENST00000590422 POLR3BQ9NW08 1133 aaPredicted RBP13.02□□□□□ -0.33
CTIF-208ENST00000590422 DDX43Q9NXZ2 648 aaKnown RBP13.02□□□□□ -0.33
CTIF-208ENST00000590422 CCDC39Q9UFE4 941 aa13.02□□□□□ -0.33
CTIF-208ENST00000590422 MAGED2Q9UNF1 606 aaPredicted RBP13.02□□□□□ -0.33
CTIF-208ENST00000590422 EXOC7Q9UPT5 735 aa13.02□□□□□ -0.33
CTIF-208ENST00000590422 MORC2Q9Y6X9 1032 aaPredicted RBP13.02□□□□□ -0.33
CTIF-208ENST00000590422 CNOT1A5YKK6 2376 aaKnown RBP13.02□□□□□ -0.33
CTIF-208ENST00000590422 EPG5Q9HCE0 2579 aa13.02□□□□□ -0.33
CTIF-208ENST00000590422 PRR5-ARHGAP8B1AHC4 643 aa13.01□□□□□ -0.33
CTIF-208ENST00000590422 PRPF6O94906 941 aaKnown RBP13.01□□□□□ -0.33
CTIF-208ENST00000590422 RETP07949 1114 aa13.01□□□□□ -0.33
CTIF-208ENST00000590422 GARTP22102 1010 aa13.01□□□□□ -0.33
CTIF-208ENST00000590422 AVPR1AP37288 418 aa13.01□□□□□ -0.33
CTIF-208ENST00000590422 TXLNAP40222 546 aa13.01□□□□□ -0.33
CTIF-208ENST00000590422 STAT6P42226 847 aa13.01□□□□□ -0.33
CTIF-208ENST00000590422 PXNP49023 591 aaPredicted RBP13.01□□□□□ -0.33
CTIF-208ENST00000590422 ARHGAP8P85298 464 aa13.01□□□□□ -0.33
CTIF-208ENST00000590422 TMEM196Q5HYL7 178 aa13.01□□□□□ -0.33
CTIF-208ENST00000590422 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.01□□□□□ -0.33
CTIF-208ENST00000590422 FAM160A2Q8N612 972 aaPredicted RBP13.01□□□□□ -0.33
CTIF-208ENST00000590422 CSGALNACT2Q8N6G5 542 aa13.01□□□□□ -0.33
CTIF-208ENST00000590422 LRRC52Q8N7C0 313 aa13.01□□□□□ -0.33
CTIF-208ENST00000590422 NOC3LQ8WTT2 800 aaKnown RBP13.01□□□□□ -0.33
CTIF-208ENST00000590422 HPS3Q969F9 1004 aa13.01□□□□□ -0.33
CTIF-208ENST00000590422 SLC22A12Q96S37 553 aa13.01□□□□□ -0.33
CTIF-208ENST00000590422 FBRSL1Q9HCM7 1045 aaKnown RBP13.01□□□□□ -0.33
CTIF-208ENST00000590422 TDP1Q9NUW8 608 aa13.01□□□□□ -0.33
CTIF-208ENST00000590422 THG1LQ9NWX6 298 aaKnown RBP13.01□□□□□ -0.33
CTIF-208ENST00000590422 GTF3C4Q9UKN8 822 aa13.01□□□□□ -0.33
CTIF-208ENST00000590422 ITGA11Q9UKX5 1188 aa13.01□□□□□ -0.33
CTIF-208ENST00000590422 GDF9O60383 454 aa13□□□□□ -0.33
CTIF-208ENST00000590422 HUS1O60921 280 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms