RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 TWF1Q12792 350 aa22.74■■□□□ 1.23
ATG4D-212ENST00000590096 ANO6Q4KMQ2 910 aa22.74■■□□□ 1.23
ATG4D-212ENST00000590096 C4orf50Q6ZRC1 276 aa22.74■■□□□ 1.23
ATG4D-212ENST00000590096 SPATA2LQ8IUW3 424 aaPredicted RBP22.74■■□□□ 1.23
ATG4D-212ENST00000590096 FEZF2Q8TBJ5 459 aa22.74■■□□□ 1.23
ATG4D-212ENST00000590096 SEPT5Q99719 369 aaPredicted RBP22.74■■□□□ 1.23
ATG4D-212ENST00000590096 PHF7Q9BWX1 381 aaPredicted RBP22.74■■□□□ 1.23
ATG4D-212ENST00000590096 SDCBP2Q9H190 292 aa22.74■■□□□ 1.23
ATG4D-212ENST00000590096 POMKQ9H5K3 350 aa22.74■■□□□ 1.23
ATG4D-212ENST00000590096 SAMSN1Q9NSI8 373 aaKnown RBP22.74■■□□□ 1.23
ATG4D-212ENST00000590096 TMLHEQ9NVH6 421 aa22.74■■□□□ 1.23
ATG4D-212ENST00000590096 PRKAG3Q9UGI9 489 aa22.74■■□□□ 1.23
ATG4D-212ENST00000590096 SYCE3A1L190 88 aa22.73■■□□□ 1.23
ATG4D-212ENST00000590096 MYBPHLA2RUH7 354 aa22.73■■□□□ 1.23
ATG4D-212ENST00000590096 KCNJ18B7U540 433 aa22.73■■□□□ 1.23
ATG4D-212ENST00000590096 ATP2C2O75185 946 aa22.73■■□□□ 1.23
ATG4D-212ENST00000590096 PRKCSHP14314 528 aaPredicted RBP22.73■■□□□ 1.23
ATG4D-212ENST00000590096 CDR1P51861 262 aa22.73■■□□□ 1.23
ATG4D-212ENST00000590096 KCNJ12Q14500 433 aa22.73■■□□□ 1.23
ATG4D-212ENST00000590096 MAN2A1Q16706 1144 aa22.73■■□□□ 1.23
ATG4D-212ENST00000590096 MGAT5BQ3V5L5 792 aa22.73■■□□□ 1.23
ATG4D-212ENST00000590096 FAM171BQ6P995 826 aa22.73■■□□□ 1.23
ATG4D-212ENST00000590096 UNC93AQ86WB7 457 aa22.73■■□□□ 1.23
ATG4D-212ENST00000590096 ADAMTS19Q8TE59 1207 aa22.73■■□□□ 1.23
ATG4D-212ENST00000590096 TNIP3Q96KP6 325 aa22.73■■□□□ 1.23
ATG4D-212ENST00000590096 PKMYT1Q99640 499 aa22.73■■□□□ 1.23
ATG4D-212ENST00000590096 DNAI2Q9GZS0 605 aa22.73■■□□□ 1.23
ATG4D-212ENST00000590096 CRISPLD1Q9H336 500 aa22.73■■□□□ 1.23
ATG4D-212ENST00000590096 PTPN1P18031 435 aaKnown RBP22.72■■□□□ 1.23
ATG4D-212ENST00000590096 EEF1GP26641 437 aaKnown RBP22.72■■□□□ 1.23
ATG4D-212ENST00000590096 EPHB3P54753 998 aa22.72■■□□□ 1.23
ATG4D-212ENST00000590096 LRMPQ12912 555 aa22.72■■□□□ 1.23
ATG4D-212ENST00000590096 NFKBIBQ15653 356 aa22.72■■□□□ 1.23
ATG4D-212ENST00000590096 MDH1BQ5I0G3 518 aa22.72■■□□□ 1.23
ATG4D-212ENST00000590096 ADHFE1Q8IWW8 467 aa22.72■■□□□ 1.23
ATG4D-212ENST00000590096 TTC39CQ8N584 583 aa22.72■■□□□ 1.23
ATG4D-212ENST00000590096 TTC9BQ8N6N2 239 aa22.72■■□□□ 1.23
ATG4D-212ENST00000590096 B3GALNT2Q8NCR0 500 aa22.72■■□□□ 1.23
ATG4D-212ENST00000590096 MYCBPAPQ8TBZ2 947 aa22.72■■□□□ 1.23
ATG4D-212ENST00000590096 TATDN2Q93075 761 aa22.72■■□□□ 1.23
ATG4D-212ENST00000590096 FUBP3Q96I24 572 aaKnown RBP eCLIP22.72■■□□□ 1.23
ATG4D-212ENST00000590096 NT5C1BQ96P26 610 aa22.72■■□□□ 1.23
ATG4D-212ENST00000590096 DPEP3Q9H4B8 488 aa22.72■■□□□ 1.23
ATG4D-212ENST00000590096 WDR6Q9NNW5 1121 aaKnown RBP22.72■■□□□ 1.23
ATG4D-212ENST00000590096 ABCB6Q9NP58 842 aa22.72■■□□□ 1.23
ATG4D-212ENST00000590096 CRTAC1Q9NQ79 661 aa22.72■■□□□ 1.23
ATG4D-212ENST00000590096 NME7Q9Y5B8 376 aa22.72■■□□□ 1.23
ATG4D-212ENST00000590096 CLUHO75153 1309 aa22.72■■□□□ 1.23
ATG4D-212ENST00000590096 HAPLN1P10915 354 aaPredicted RBP22.71■■□□□ 1.23
ATG4D-212ENST00000590096 CD58P19256 250 aa22.71■■□□□ 1.23
ATG4D-212ENST00000590096 NDST1P52848 882 aa22.71■■□□□ 1.23
ATG4D-212ENST00000590096 CYP27A1Q02318 531 aa22.71■■□□□ 1.23
ATG4D-212ENST00000590096 INCA1Q0VD86 236 aa22.71■■□□□ 1.23
ATG4D-212ENST00000590096 TCP11X2Q5H9J9 407 aa22.71■■□□□ 1.23
ATG4D-212ENST00000590096 IQCEQ6IPM2 695 aa22.71■■□□□ 1.23
ATG4D-212ENST00000590096 GRASPQ7Z6J2 395 aaPredicted RBP22.71■■□□□ 1.23
ATG4D-212ENST00000590096 EHBP1Q8NDI1 1231 aa22.71■■□□□ 1.23
ATG4D-212ENST00000590096 MYLPFQ96A32 169 aa22.71■■□□□ 1.23
ATG4D-212ENST00000590096 ZNF512Q96ME7 567 aaPredicted RBP22.71■■□□□ 1.23
ATG4D-212ENST00000590096 TUBGCP2Q9BSJ2 902 aa22.71■■□□□ 1.23
ATG4D-212ENST00000590096 FAM124BQ9H5Z6 455 aaPredicted RBP22.71■■□□□ 1.23
ATG4D-212ENST00000590096 GCNT4Q9P109 453 aa22.71■■□□□ 1.23
ATG4D-212ENST00000590096 NR2E1Q9Y466 385 aa22.71■■□□□ 1.23
ATG4D-212ENST00000590096 PES1O00541 588 aaKnown RBP22.7■■□□□ 1.22
ATG4D-212ENST00000590096 SOAT2O75908 522 aa22.7■■□□□ 1.22
ATG4D-212ENST00000590096 TPM2P07951 284 aa22.7■■□□□ 1.22
ATG4D-212ENST00000590096 PTPN2P17706 415 aa22.7■■□□□ 1.22
ATG4D-212ENST00000590096 TBXAS1P24557 533 aaPredicted RBP22.7■■□□□ 1.22
ATG4D-212ENST00000590096 YWHAEP62258 255 aaKnown RBP22.7■■□□□ 1.22
ATG4D-212ENST00000590096 CUL2Q13617 745 aa22.7■■□□□ 1.22
ATG4D-212ENST00000590096 CCDC142Q17RM4 750 aa22.7■■□□□ 1.22
ATG4D-212ENST00000590096 CFAP221Q4G0U5 840 aa22.7■■□□□ 1.22
ATG4D-212ENST00000590096 PABPC1LQ4VXU2 614 aaKnown RBP22.7■■□□□ 1.22
ATG4D-212ENST00000590096 FAM200AQ8TCP9 573 aa22.7■■□□□ 1.22
ATG4D-212ENST00000590096 RPGRIP1Q96KN7 1286 aa22.7■■□□□ 1.22
ATG4D-212ENST00000590096 UHRF1Q96T88 793 aaPredicted RBP22.7■■□□□ 1.22
ATG4D-212ENST00000590096 INTS2Q9H0H0 1204 aaKnown RBP22.7■■□□□ 1.22
ATG4D-212ENST00000590096 FANCLQ9NW38 375 aa22.7■■□□□ 1.22
ATG4D-212ENST00000590096 DENND4AQ7Z401 1863 aa22.69■■□□□ 1.22
ATG4D-212ENST00000590096 CILPO75339 1184 aa22.69■■□□□ 1.22
ATG4D-212ENST00000590096 CYP2F1P24903 491 aa22.69■■□□□ 1.22
ATG4D-212ENST00000590096 ZP2Q05996 745 aa22.69■■□□□ 1.22
ATG4D-212ENST00000590096 VEPH1Q14D04 833 aa22.69■■□□□ 1.22
ATG4D-212ENST00000590096 ZSCAN23Q3MJ62 389 aa22.69■■□□□ 1.22
ATG4D-212ENST00000590096 VWA3BQ502W6 1294 aa22.69■■□□□ 1.22
ATG4D-212ENST00000590096 CDKAL1Q5VV42 579 aa22.69■■□□□ 1.22
ATG4D-212ENST00000590096 GBP6Q6ZN66 633 aa22.69■■□□□ 1.22
ATG4D-212ENST00000590096 ACOT1Q86TX2 421 aa22.69■■□□□ 1.22
ATG4D-212ENST00000590096 ITIH5Q86UX2 942 aa22.69■■□□□ 1.22
ATG4D-212ENST00000590096 PPM1KQ8N3J5 372 aa22.69■■□□□ 1.22
ATG4D-212ENST00000590096 AOPEPQ8N6M6 819 aa22.69■■□□□ 1.22
ATG4D-212ENST00000590096 ANKRD20A12PQ8NF67 263 aa22.69■■□□□ 1.22
ATG4D-212ENST00000590096 PCED1BQ96HM7 432 aa22.69■■□□□ 1.22
ATG4D-212ENST00000590096 BPIFA3Q9BQP9 254 aa22.69■■□□□ 1.22
ATG4D-212ENST00000590096 CORO1BQ9BR76 489 aa22.69■■□□□ 1.22
ATG4D-212ENST00000590096 FUCA2Q9BTY2 467 aa22.69■■□□□ 1.22
ATG4D-212ENST00000590096 NT5C1AQ9BXI3 368 aa22.69■■□□□ 1.22
ATG4D-212ENST00000590096 NDST4Q9H3R1 872 aa22.69■■□□□ 1.22
ATG4D-212ENST00000590096 HCFC1R1Q9NWW0 138 aa22.69■■□□□ 1.22
ATG4D-212ENST00000590096 CEP72Q9P209 647 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms