RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 CLLU1OSQ5K130 101 aa8.8□□□□□ -1
SMAD4-209ENST00000589941 FYB2Q5VWT5 728 aa8.8□□□□□ -1
SMAD4-209ENST00000589941 IL31Q6EBC2 164 aa8.8□□□□□ -1
SMAD4-209ENST00000589941 ATG4DQ86TL0 474 aaPredicted RBP8.8□□□□□ -1
SMAD4-209ENST00000589941 ERC1Q8IUD2 1116 aa8.8□□□□□ -1
SMAD4-209ENST00000589941 APPBP2Q92624 585 aa8.8□□□□□ -1
SMAD4-209ENST00000589941 DSCC1Q9BVC3 393 aa8.8□□□□□ -1
SMAD4-209ENST00000589941 SLKQ9H2G2 1235 aaPredicted RBP8.8□□□□□ -1
SMAD4-209ENST00000589941 LTB4R2Q9NPC1 389 aa8.8□□□□□ -1
SMAD4-209ENST00000589941 SPG21Q9NZD8 308 aa8.8□□□□□ -1
SMAD4-209ENST00000589941 ZNF215Q9UL58 517 aaPredicted RBP8.8□□□□□ -1
SMAD4-209ENST00000589941 NOC2LQ9Y3T9 749 aaKnown RBP8.8□□□□□ -1
SMAD4-209ENST00000589941 SHISA7A6NL88 538 aa8.79□□□□□ -1
SMAD4-209ENST00000589941 B2RBV5 119 aa8.79□□□□□ -1
SMAD4-209ENST00000589941 H0Y8X5 98 aa8.79□□□□□ -1
SMAD4-209ENST00000589941 RANBP6O60518 1105 aaKnown RBP8.79□□□□□ -1
SMAD4-209ENST00000589941 EIF5BO60841 1220 aaKnown RBP8.79□□□□□ -1
SMAD4-209ENST00000589941 CXCL14O95715 111 aa8.79□□□□□ -1
SMAD4-209ENST00000589941 RETP07949 1114 aa8.79□□□□□ -1
SMAD4-209ENST00000589941 HSPD1P10809 573 aaKnown RBP8.79□□□□□ -1
SMAD4-209ENST00000589941 TOP1P11387 765 aaKnown RBP8.79□□□□□ -1
SMAD4-209ENST00000589941 XRCC6P12956 609 aaKnown RBP eCLIP8.79□□□□□ -1
SMAD4-209ENST00000589941 HOXC13P31276 330 aa8.79□□□□□ -1
SMAD4-209ENST00000589941 PPM1AP35813 382 aa8.79□□□□□ -1
SMAD4-209ENST00000589941 PCBP3P57721 371 aaKnown RBP8.79□□□□□ -1
SMAD4-209ENST00000589941 MRPS9P82933 396 aaKnown RBP8.79□□□□□ -1
SMAD4-209ENST00000589941 MTAPQ13126 283 aa8.79□□□□□ -1
SMAD4-209ENST00000589941 MLF2Q15773 248 aaPredicted RBP8.79□□□□□ -1
SMAD4-209ENST00000589941 LARP1BQ659C4 914 aaKnown RBP8.79□□□□□ -1
SMAD4-209ENST00000589941 HEATR6Q6AI08 1181 aaKnown RBP8.79□□□□□ -1
SMAD4-209ENST00000589941 C19orf48Q6RUI8 117 aa8.79□□□□□ -1
SMAD4-209ENST00000589941 METTL7BQ6UX53 244 aa8.79□□□□□ -1
SMAD4-209ENST00000589941 RNF111Q6ZNA4 994 aa8.79□□□□□ -1
SMAD4-209ENST00000589941 RSPH3Q86UC2 560 aa8.79□□□□□ -1
SMAD4-209ENST00000589941 VPS52Q8N1B4 723 aa8.79□□□□□ -1
SMAD4-209ENST00000589941 LRRC43Q8N309 656 aa8.79□□□□□ -1
SMAD4-209ENST00000589941 HNRNPLLQ8WVV9 542 aaKnown RBP8.79□□□□□ -1
SMAD4-209ENST00000589941 PPP1R16BQ96T49 567 aa8.79□□□□□ -1
SMAD4-209ENST00000589941 RRAGDQ9NQL2 400 aaPredicted RBP8.79□□□□□ -1
SMAD4-209ENST00000589941 RGS18Q9NS28 235 aa8.79□□□□□ -1
SMAD4-209ENST00000589941 KIF26AQ9ULI4 1882 aaPredicted RBP8.79□□□□□ -1
SMAD4-209ENST00000589941 NUP205Q92621 2012 aa8.78□□□□□ -1
SMAD4-209ENST00000589941 DENND3A2RUS2 1198 aa8.78□□□□□ -1
SMAD4-209ENST00000589941 GOLGA6L3A6NEY3 463 aa8.78□□□□□ -1
SMAD4-209ENST00000589941 ANHXE9PGG2 379 aa8.78□□□□□ -1
SMAD4-209ENST00000589941 B4GALT3O60512 393 aa8.78□□□□□ -1
SMAD4-209ENST00000589941 PPP1R11O60927 126 aaPredicted RBP8.78□□□□□ -1
SMAD4-209ENST00000589941 RFPL2O75678 378 aa8.78□□□□□ -1
SMAD4-209ENST00000589941 RPL10P27635 214 aaKnown RBP8.78□□□□□ -1
SMAD4-209ENST00000589941 TCF7P36402 384 aaPredicted RBP8.78□□□□□ -1
SMAD4-209ENST00000589941 CLCN4P51793 760 aa8.78□□□□□ -1
SMAD4-209ENST00000589941 GPC5P78333 572 aa8.78□□□□□ -1
SMAD4-209ENST00000589941 FZD5Q13467 585 aa8.78□□□□□ -1
SMAD4-209ENST00000589941 AASDHQ4L235 1098 aaPredicted RBP8.78□□□□□ -1
SMAD4-209ENST00000589941 TSHZ3Q63HK5 1081 aa8.78□□□□□ -1
SMAD4-209ENST00000589941 KCNV1Q6PIU1 500 aa8.78□□□□□ -1
SMAD4-209ENST00000589941 C6orf15Q6UXA7 325 aaPredicted RBP8.78□□□□□ -1
SMAD4-209ENST00000589941 GET4Q7L5D6 327 aaPredicted RBP8.78□□□□□ -1
SMAD4-209ENST00000589941 CHD1LQ86WJ1 897 aa8.78□□□□□ -1
SMAD4-209ENST00000589941 HSCBQ8IWL3 235 aa8.78□□□□□ -1
SMAD4-209ENST00000589941 CLASRPQ8N2M8 674 aaKnown RBP8.78□□□□□ -1
SMAD4-209ENST00000589941 ADCY4Q8NFM4 1077 aa8.78□□□□□ -1
SMAD4-209ENST00000589941 DDX1Q92499 740 aaKnown RBP8.78□□□□□ -1
SMAD4-209ENST00000589941 FGF14Q92915 247 aa8.78□□□□□ -1
SMAD4-209ENST00000589941 G6PC3Q9BUM1 346 aa8.78□□□□□ -1
SMAD4-209ENST00000589941 CELF4Q9BZC1 486 aaKnown RBP8.78□□□□□ -1
SMAD4-209ENST00000589941 TMEM117Q9H0C3 514 aa8.78□□□□□ -1
SMAD4-209ENST00000589941 SMOC1Q9H4F8 434 aa8.78□□□□□ -1
SMAD4-209ENST00000589941 NOL6Q9H6R4 1146 aaKnown RBP8.78□□□□□ -1
SMAD4-209ENST00000589941 SP110Q9HB58 689 aa8.78□□□□□ -1
SMAD4-209ENST00000589941 MAN1C1Q9NR34 630 aa8.78□□□□□ -1
SMAD4-209ENST00000589941 TMEM161AQ9NX61 479 aa8.78□□□□□ -1
SMAD4-209ENST00000589941 PNMA2Q9UL42 364 aa8.78□□□□□ -1
SMAD4-209ENST00000589941 RAB23Q9ULC3 237 aa8.78□□□□□ -1
SMAD4-209ENST00000589941 FHOD1Q9Y613 1164 aa8.78□□□□□ -1
SMAD4-209ENST00000589941 SQORQ9Y6N5 450 aa8.78□□□□□ -1
SMAD4-209ENST00000589941 TMEM8BA6NDV4 472 aa8.77□□□□□ -1.01
SMAD4-209ENST00000589941 ITGA4P13612 1032 aa8.77□□□□□ -1.01
SMAD4-209ENST00000589941 LIMK1P53667 647 aa8.77□□□□□ -1.01
SMAD4-209ENST00000589941 GHRHRQ02643 423 aa8.77□□□□□ -1.01
SMAD4-209ENST00000589941 KRT17Q04695 432 aa8.77□□□□□ -1.01
SMAD4-209ENST00000589941 TCEAL1Q15170 157 aa8.77□□□□□ -1.01
SMAD4-209ENST00000589941 NONOQ15233 471 aaKnown RBP eCLIP8.77□□□□□ -1.01
SMAD4-209ENST00000589941 STPG1Q5TH74 334 aa8.77□□□□□ -1.01
SMAD4-209ENST00000589941 ZSCAN25Q6NSZ9 544 aa8.77□□□□□ -1.01
SMAD4-209ENST00000589941 PARM1Q6UWI2 310 aa8.77□□□□□ -1.01
SMAD4-209ENST00000589941 STOX1Q6ZVD7 989 aa8.77□□□□□ -1.01
SMAD4-209ENST00000589941 ANKS3Q6ZW76 656 aa8.77□□□□□ -1.01
SMAD4-209ENST00000589941 SLC24A5Q71RS6 500 aa8.77□□□□□ -1.01
SMAD4-209ENST00000589941 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.77□□□□□ -1.01
SMAD4-209ENST00000589941 ITPRIPQ8IWB1 547 aa8.77□□□□□ -1.01
SMAD4-209ENST00000589941 ADGRF4Q8IZF3 695 aa8.77□□□□□ -1.01
SMAD4-209ENST00000589941 ZNF513Q8N8E2 541 aaPredicted RBP8.77□□□□□ -1.01
SMAD4-209ENST00000589941 GLG1Q92896 1179 aa8.77□□□□□ -1.01
SMAD4-209ENST00000589941 ZNF707Q96C28 371 aaPredicted RBP8.77□□□□□ -1.01
SMAD4-209ENST00000589941 MYL10Q9BUA6 226 aa8.77□□□□□ -1.01
SMAD4-209ENST00000589941 SCNM1Q9BWG6 230 aa8.77□□□□□ -1.01
SMAD4-209ENST00000589941 NAPBQ9H115 298 aa8.77□□□□□ -1.01
SMAD4-209ENST00000589941 ATP6V0A4Q9HBG4 840 aa8.77□□□□□ -1.01
SMAD4-209ENST00000589941 WDR6Q9NNW5 1121 aaKnown RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms