RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 MYBPHLA2RUH7 354 aa16.15■□□□□ 0.18
ATG4D-211ENST00000589753 HIDE1A8MVS5 230 aa16.15■□□□□ 0.18
ATG4D-211ENST00000589753 GOLGA6L6A8MZA4 724 aa16.15■□□□□ 0.18
ATG4D-211ENST00000589753 AKR1B15C9JRZ8 316 aaPredicted RBP16.15■□□□□ 0.18
ATG4D-211ENST00000589753 TEX28O15482 410 aa16.15■□□□□ 0.18
ATG4D-211ENST00000589753 ADAM12O43184 909 aa16.15■□□□□ 0.18
ATG4D-211ENST00000589753 MFAP3LO75121 409 aa16.15■□□□□ 0.18
ATG4D-211ENST00000589753 CNPP09543 421 aaKnown RBP16.15■□□□□ 0.18
ATG4D-211ENST00000589753 CCDC172P0C7W6 258 aa16.15■□□□□ 0.18
ATG4D-211ENST00000589753 CD19P15391 556 aa16.15■□□□□ 0.18
ATG4D-211ENST00000589753 FERP16591 822 aa16.15■□□□□ 0.18
ATG4D-211ENST00000589753 OR1D2P34982 312 aa16.15■□□□□ 0.18
ATG4D-211ENST00000589753 RANBP2P49792 3224 aaKnown RBP16.15■□□□□ 0.18
ATG4D-211ENST00000589753 NDUFV1P49821 464 aa16.15■□□□□ 0.18
ATG4D-211ENST00000589753 ARID5AQ03989 594 aa16.15■□□□□ 0.18
ATG4D-211ENST00000589753 PTK2Q05397 1052 aa16.15■□□□□ 0.18
ATG4D-211ENST00000589753 MAPRE1Q15691 268 aaKnown RBP16.15■□□□□ 0.18
ATG4D-211ENST00000589753 ASIC2Q16515 512 aa16.15■□□□□ 0.18
ATG4D-211ENST00000589753 SLC39A12Q504Y0 691 aa16.15■□□□□ 0.18
ATG4D-211ENST00000589753 MDH1BQ5I0G3 518 aa16.15■□□□□ 0.18
ATG4D-211ENST00000589753 FAM171BQ6P995 826 aa16.15■□□□□ 0.18
ATG4D-211ENST00000589753 LRRTM3Q86VH5 581 aa16.15■□□□□ 0.18
ATG4D-211ENST00000589753 GLYCTKQ8IVS8 523 aa16.15■□□□□ 0.18
ATG4D-211ENST00000589753 MYCBPAPQ8TBZ2 947 aa16.15■□□□□ 0.18
ATG4D-211ENST00000589753 KLHL5Q96PQ7 755 aa16.15■□□□□ 0.18
ATG4D-211ENST00000589753 PKMYT1Q99640 499 aa16.15■□□□□ 0.18
ATG4D-211ENST00000589753 LPIN3Q9BQK8 851 aa16.15■□□□□ 0.18
ATG4D-211ENST00000589753 AIPL1Q9NZN9 384 aa16.15■□□□□ 0.18
ATG4D-211ENST00000589753 GTF3C4Q9UKN8 822 aa16.15■□□□□ 0.18
ATG4D-211ENST00000589753 PCDHGC5Q9Y5F6 944 aa16.15■□□□□ 0.18
ATG4D-211ENST00000589753 CALCAP01258 141 aa16.14■□□□□ 0.17
ATG4D-211ENST00000589753 VDRP11473 427 aa16.14■□□□□ 0.17
ATG4D-211ENST00000589753 GNA15P30679 374 aa16.14■□□□□ 0.17
ATG4D-211ENST00000589753 ADKP55263 362 aaKnown RBP16.14■□□□□ 0.17
ATG4D-211ENST00000589753 ROR1Q01973 937 aa16.14■□□□□ 0.17
ATG4D-211ENST00000589753 GOLGA8FQ08AF8 430 aa16.14■□□□□ 0.17
ATG4D-211ENST00000589753 GOLGA8DPQ0D2H9 430 aa16.14■□□□□ 0.17
ATG4D-211ENST00000589753 GPR17Q13304 367 aa16.14■□□□□ 0.17
ATG4D-211ENST00000589753 NFE2Q16621 373 aaPredicted RBP16.14■□□□□ 0.17
ATG4D-211ENST00000589753 CCDC142Q17RM4 750 aa16.14■□□□□ 0.17
ATG4D-211ENST00000589753 SGO2Q562F6 1265 aa16.14■□□□□ 0.17
ATG4D-211ENST00000589753 SLC47A2Q86VL8 602 aa16.14■□□□□ 0.17
ATG4D-211ENST00000589753 GPIHBP1Q8IV16 184 aa16.14■□□□□ 0.17
ATG4D-211ENST00000589753 C12orf29Q8N999 325 aa16.14■□□□□ 0.17
ATG4D-211ENST00000589753 OR8K1Q8NGG5 319 aa16.14■□□□□ 0.17
ATG4D-211ENST00000589753 SYN2Q92777 582 aaPredicted RBP16.14■□□□□ 0.17
ATG4D-211ENST00000589753 MRPL38Q96DV4 380 aaKnown RBP16.14■□□□□ 0.17
ATG4D-211ENST00000589753 DNAJC7Q99615 494 aa16.14■□□□□ 0.17
ATG4D-211ENST00000589753 PRDM12Q9H4Q4 367 aa16.14■□□□□ 0.17
ATG4D-211ENST00000589753 ACP6Q9NPH0 428 aa16.14■□□□□ 0.17
ATG4D-211ENST00000589753 FAM49BQ9NUQ9 324 aa16.14■□□□□ 0.17
ATG4D-211ENST00000589753 WDR27A2RRH5 827 aa16.13■□□□□ 0.17
ATG4D-211ENST00000589753 THAP12O43422 761 aa16.13■□□□□ 0.17
ATG4D-211ENST00000589753 ADH1AP07327 375 aa16.13■□□□□ 0.17
ATG4D-211ENST00000589753 CYP11B1P15538 503 aa16.13■□□□□ 0.17
ATG4D-211ENST00000589753 BRD2P25440 801 aaKnown RBP16.13■□□□□ 0.17
ATG4D-211ENST00000589753 PDE6CP51160 858 aa16.13■□□□□ 0.17
ATG4D-211ENST00000589753 CYP27A1Q02318 531 aa16.13■□□□□ 0.17
ATG4D-211ENST00000589753 SMARCB1Q12824 385 aa16.13■□□□□ 0.17
ATG4D-211ENST00000589753 RAB33AQ14088 237 aa16.13■□□□□ 0.17
ATG4D-211ENST00000589753 ARID5BQ14865 1188 aa16.13■□□□□ 0.17
ATG4D-211ENST00000589753 GRIN2CQ14957 1233 aa16.13■□□□□ 0.17
ATG4D-211ENST00000589753 TSR1Q2NL82 804 aaKnown RBP16.13■□□□□ 0.17
ATG4D-211ENST00000589753 HABP4Q5JVS0 413 aaKnown RBP16.13■□□□□ 0.17
ATG4D-211ENST00000589753 E4F1Q66K89 784 aaPredicted RBP16.13■□□□□ 0.17
ATG4D-211ENST00000589753 ARHGAP17Q68EM7 881 aa16.13■□□□□ 0.17
ATG4D-211ENST00000589753 C4orf50Q6ZRC1 276 aa16.13■□□□□ 0.17
ATG4D-211ENST00000589753 IRF2BP2Q7Z5L9 587 aa16.13■□□□□ 0.17
ATG4D-211ENST00000589753 TFAP2BQ92481 460 aa16.13■□□□□ 0.17
ATG4D-211ENST00000589753 MYLPFQ96A32 169 aa16.13■□□□□ 0.17
ATG4D-211ENST00000589753 CYFIP2Q96F07 1278 aa16.13■□□□□ 0.17
ATG4D-211ENST00000589753 PCED1BQ96HM7 432 aa16.13■□□□□ 0.17
ATG4D-211ENST00000589753 ABHD10Q9NUJ1 306 aa16.13■□□□□ 0.17
ATG4D-211ENST00000589753 TMLHEQ9NVH6 421 aa16.13■□□□□ 0.17
ATG4D-211ENST00000589753 MED7O43513 233 aa16.12■□□□□ 0.17
ATG4D-211ENST00000589753 ABLIM3O94929 683 aa16.12■□□□□ 0.17
ATG4D-211ENST00000589753 CCDC130P13994 396 aa16.12■□□□□ 0.17
ATG4D-211ENST00000589753 KLRC2P26717 231 aa16.12■□□□□ 0.17
ATG4D-211ENST00000589753 HNRNPH3P31942 346 aaKnown RBP16.12■□□□□ 0.17
ATG4D-211ENST00000589753 STILQ15468 1287 aa16.12■□□□□ 0.17
ATG4D-211ENST00000589753 PPP1R26Q5T8A7 1209 aaPredicted RBP16.12■□□□□ 0.17
ATG4D-211ENST00000589753 TPGS2Q68CL5 300 aa16.12■□□□□ 0.17
ATG4D-211ENST00000589753 RNF19BQ6ZMZ0 732 aa16.12■□□□□ 0.17
ATG4D-211ENST00000589753 NOP9Q86U38 636 aaKnown RBP16.12■□□□□ 0.17
ATG4D-211ENST00000589753 PALB2Q86YC2 1186 aa16.12■□□□□ 0.17
ATG4D-211ENST00000589753 SPATA2LQ8IUW3 424 aaPredicted RBP16.12■□□□□ 0.17
ATG4D-211ENST00000589753 TC2NQ8N9U0 490 aa16.12■□□□□ 0.17
ATG4D-211ENST00000589753 ZNF461Q8TAF7 563 aa16.12■□□□□ 0.17
ATG4D-211ENST00000589753 SLC2A14Q8TDB8 520 aa16.12■□□□□ 0.17
ATG4D-211ENST00000589753 EPS8L1Q8TE68 723 aa16.12■□□□□ 0.17
ATG4D-211ENST00000589753 C2orf15Q8WU43 125 aaKnown RBP16.12■□□□□ 0.17
ATG4D-211ENST00000589753 ZNF606Q8WXB4 792 aa16.12■□□□□ 0.17
ATG4D-211ENST00000589753 PGLYRP2Q96PD5 576 aa16.12■□□□□ 0.17
ATG4D-211ENST00000589753 HNRNPABQ99729 332 aaKnown RBP16.12■□□□□ 0.17
ATG4D-211ENST00000589753 MED10Q9BTT4 135 aa16.12■□□□□ 0.17
ATG4D-211ENST00000589753 B3GNT5Q9BYG0 378 aa16.12■□□□□ 0.17
ATG4D-211ENST00000589753 ZNHIT6Q9NWK9 470 aaKnown RBP16.12■□□□□ 0.17
ATG4D-211ENST00000589753 LMCD1Q9NZU5 365 aa16.12■□□□□ 0.17
ATG4D-211ENST00000589753 PCDHB5Q9Y5E4 795 aa16.12■□□□□ 0.17
ATG4D-211ENST00000589753 ATP8B3O60423 1300 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms