RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 RABGEF1Q9UJ41 708 aa15.22■□□□□ 0.03
SMARCA4-214ENST00000589677 SLCO1B7G3V0H7 640 aa15.22■□□□□ 0.03
SMARCA4-214ENST00000589677 CEP78Q5JTW2 689 aa15.22■□□□□ 0.03
SMARCA4-214ENST00000589677 BRINP3Q76B58 766 aa15.22■□□□□ 0.03
SMARCA4-214ENST00000589677 EFL1Q7Z2Z2 1120 aaKnown RBP15.22■□□□□ 0.03
SMARCA4-214ENST00000589677 GLMNQ92990 594 aa15.22■□□□□ 0.03
SMARCA4-214ENST00000589677 TMEM8AQ9HCN3 771 aa15.22■□□□□ 0.03
SMARCA4-214ENST00000589677 FNDC3AQ9Y2H6 1198 aaKnown RBP15.22■□□□□ 0.03
SMARCA4-214ENST00000589677 ZBTB39O15060 712 aa15.22■□□□□ 0.03
SMARCA4-214ENST00000589677 GYS1P13807 737 aa15.22■□□□□ 0.03
SMARCA4-214ENST00000589677 BGNP21810 368 aa15.22■□□□□ 0.03
SMARCA4-214ENST00000589677 SKIV2L2P42285 1042 aaKnown RBP15.22■□□□□ 0.03
SMARCA4-214ENST00000589677 CHN2P52757 468 aa15.22■□□□□ 0.03
SMARCA4-214ENST00000589677 NIM1KQ8IY84 436 aa15.22■□□□□ 0.03
SMARCA4-214ENST00000589677 SLC44A5Q8NCS7 719 aa15.22■□□□□ 0.03
SMARCA4-214ENST00000589677 DNAJC16Q9Y2G8 782 aa15.22■□□□□ 0.03
SMARCA4-214ENST00000589677 GJA3Q9Y6H8 435 aa15.22■□□□□ 0.03
SMARCA4-214ENST00000589677 PIK3CDO00329 1044 aa15.22■□□□□ 0.03
SMARCA4-214ENST00000589677 SOX6P35712 828 aa15.22■□□□□ 0.03
SMARCA4-214ENST00000589677 CDK16Q00536 496 aa15.22■□□□□ 0.03
SMARCA4-214ENST00000589677 CWF19L1Q69YN2 538 aaKnown RBP15.22■□□□□ 0.03
SMARCA4-214ENST00000589677 ZNF571Q7Z3V5 609 aaPredicted RBP15.22■□□□□ 0.03
SMARCA4-214ENST00000589677 SLC26A11Q86WA9 606 aa15.22■□□□□ 0.03
SMARCA4-214ENST00000589677 NCAPG2Q86XI2 1143 aa15.22■□□□□ 0.03
SMARCA4-214ENST00000589677 FBXL16Q8N461 479 aa15.22■□□□□ 0.03
SMARCA4-214ENST00000589677 SEMA6BQ9H3T3 888 aa15.22■□□□□ 0.03
SMARCA4-214ENST00000589677 OLA1Q9NTK5 396 aaKnown RBP15.22■□□□□ 0.03
SMARCA4-214ENST00000589677 SESN1Q9Y6P5 492 aa15.22■□□□□ 0.03
SMARCA4-214ENST00000589677 LRRC10BA6NIK2 292 aa15.21■□□□□ 0.03
SMARCA4-214ENST00000589677 OPLAHO14841 1288 aa15.21■□□□□ 0.03
SMARCA4-214ENST00000589677 SERPINB5P36952 375 aa15.21■□□□□ 0.03
SMARCA4-214ENST00000589677 SYCP2LQ5T4T6 812 aa15.21■□□□□ 0.03
SMARCA4-214ENST00000589677 C12orf60Q5U649 245 aa15.21■□□□□ 0.03
SMARCA4-214ENST00000589677 PDPK2PQ6A1A2 396 aa15.21■□□□□ 0.03
SMARCA4-214ENST00000589677 CCNJLQ8IV13 435 aa15.21■□□□□ 0.03
SMARCA4-214ENST00000589677 DEFB107AQ8IZN7 70 aa15.21■□□□□ 0.03
SMARCA4-214ENST00000589677 CCDC28BQ9BUN5 200 aa15.21■□□□□ 0.03
SMARCA4-214ENST00000589677 PLA2G12BQ9BX93 195 aa15.21■□□□□ 0.03
SMARCA4-214ENST00000589677 TUBA8Q9NY65 449 aaPredicted RBP15.21■□□□□ 0.03
SMARCA4-214ENST00000589677 CFAP99D6REC4 459 aa15.21■□□□□ 0.03
SMARCA4-214ENST00000589677 CBX6O95503 412 aa15.21■□□□□ 0.03
SMARCA4-214ENST00000589677 KCNJ2P63252 427 aa15.21■□□□□ 0.03
SMARCA4-214ENST00000589677 SMAD1Q15797 465 aaKnown RBP15.21■□□□□ 0.03
SMARCA4-214ENST00000589677 SNRNP35Q16560 246 aaKnown RBP15.21■□□□□ 0.03
SMARCA4-214ENST00000589677 GJB7Q6PEY0 223 aa15.21■□□□□ 0.03
SMARCA4-214ENST00000589677 OR6P1Q8NGX9 317 aa15.21■□□□□ 0.03
SMARCA4-214ENST00000589677 FAM162AQ96A26 154 aa15.21■□□□□ 0.03
SMARCA4-214ENST00000589677 WNK4Q96J92 1243 aa15.21■□□□□ 0.03
SMARCA4-214ENST00000589677 ZFYVE19Q96K21 471 aa15.21■□□□□ 0.03
SMARCA4-214ENST00000589677 PAGR1Q9BTK6 254 aa15.21■□□□□ 0.03
SMARCA4-214ENST00000589677 C2orf40Q9H1Z8 148 aa15.21■□□□□ 0.03
SMARCA4-214ENST00000589677 ZNF335Q9H4Z2 1342 aaPredicted RBP15.21■□□□□ 0.03
SMARCA4-214ENST00000589677 C3orf70A6NLC5 250 aaPredicted RBP15.21■□□□□ 0.03
SMARCA4-214ENST00000589677 TBKBP1A7MCY6 615 aa15.21■□□□□ 0.03
SMARCA4-214ENST00000589677 LZTS3O60299 673 aaPredicted RBP15.21■□□□□ 0.03
SMARCA4-214ENST00000589677 ITGA4P13612 1032 aa15.21■□□□□ 0.03
SMARCA4-214ENST00000589677 TTKP33981 857 aa15.21■□□□□ 0.03
SMARCA4-214ENST00000589677 TRIM28Q13263 835 aaKnown RBP15.21■□□□□ 0.03
SMARCA4-214ENST00000589677 CLVS1Q8IUQ0 354 aaPredicted RBP15.21■□□□□ 0.03
SMARCA4-214ENST00000589677 BBS2Q9BXC9 721 aa15.21■□□□□ 0.03
SMARCA4-214ENST00000589677 MYO1DO94832 1006 aa15.21■□□□□ 0.02
SMARCA4-214ENST00000589677 RAG1P15918 1043 aa15.21■□□□□ 0.02
SMARCA4-214ENST00000589677 FOXD4Q12950 439 aaPredicted RBP15.21■□□□□ 0.02
SMARCA4-214ENST00000589677 ZCCHC7Q8N3Z6 543 aaKnown RBP15.21■□□□□ 0.02
SMARCA4-214ENST00000589677 CERKQ8TCT0 537 aa15.21■□□□□ 0.02
SMARCA4-214ENST00000589677 LENG1Q96BZ8 264 aaPredicted RBP15.21■□□□□ 0.02
SMARCA4-214ENST00000589677 CNPY3Q9BT09 278 aa15.21■□□□□ 0.02
SMARCA4-214ENST00000589677 PLGRKTQ9HBL7 147 aa15.21■□□□□ 0.02
SMARCA4-214ENST00000589677 SLC5A4Q9NY91 659 aa15.21■□□□□ 0.02
SMARCA4-214ENST00000589677 UBAP1Q9NZ09 502 aa15.21■□□□□ 0.02
SMARCA4-214ENST00000589677 HACD3Q9P035 362 aa15.21■□□□□ 0.02
SMARCA4-214ENST00000589677 A0A087WXM4 84 aa15.2■□□□□ 0.02
SMARCA4-214ENST00000589677 PRR23D1E9PI22 279 aaPredicted RBP15.2■□□□□ 0.02
SMARCA4-214ENST00000589677 PRR23D2P0DMB1 279 aaPredicted RBP15.2■□□□□ 0.02
SMARCA4-214ENST00000589677 GCLCP48506 637 aaPredicted RBP15.2■□□□□ 0.02
SMARCA4-214ENST00000589677 STILQ15468 1287 aa15.2■□□□□ 0.02
SMARCA4-214ENST00000589677 CNGA2Q16280 664 aa15.2■□□□□ 0.02
SMARCA4-214ENST00000589677 NET1Q7Z628 596 aaPredicted RBP15.2■□□□□ 0.02
SMARCA4-214ENST00000589677 FAM71DQ8N9W8 422 aa15.2■□□□□ 0.02
SMARCA4-214ENST00000589677 KYQ8NBH2 561 aa15.2■□□□□ 0.02
SMARCA4-214ENST00000589677 ATG4AQ8WYN0 398 aa15.2■□□□□ 0.02
SMARCA4-214ENST00000589677 MRPL4Q9BYD3 311 aaKnown RBP15.2■□□□□ 0.02
SMARCA4-214ENST00000589677 ZNF556Q9HAH1 456 aa15.2■□□□□ 0.02
SMARCA4-214ENST00000589677 C1orf232A0A0U1RR37 186 aa15.2■□□□□ 0.02
SMARCA4-214ENST00000589677 WBP4O75554 376 aaKnown RBP15.2■□□□□ 0.02
SMARCA4-214ENST00000589677 CIITAP33076 1130 aa15.2■□□□□ 0.02
SMARCA4-214ENST00000589677 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.2■□□□□ 0.02
SMARCA4-214ENST00000589677 LBRQ14739 615 aaKnown RBP15.2■□□□□ 0.02
SMARCA4-214ENST00000589677 ZNF568Q3ZCX4 644 aa15.2■□□□□ 0.02
SMARCA4-214ENST00000589677 LAYNQ6UX15 382 aa15.2■□□□□ 0.02
SMARCA4-214ENST00000589677 CCDC81Q6ZN84 652 aa15.2■□□□□ 0.02
SMARCA4-214ENST00000589677 PARD3BQ8TEW8 1205 aa15.2■□□□□ 0.02
SMARCA4-214ENST00000589677 PTPRN2Q92932 1015 aa15.2■□□□□ 0.02
SMARCA4-214ENST00000589677 POLR3FQ9H1D9 316 aaPredicted RBP15.2■□□□□ 0.02
SMARCA4-214ENST00000589677 EXOSC4Q9NPD3 245 aaKnown RBP15.2■□□□□ 0.02
SMARCA4-214ENST00000589677 E5RI56 91 aa15.2■□□□□ 0.02
SMARCA4-214ENST00000589677 CLASP2O75122 1294 aaKnown RBP15.2■□□□□ 0.02
SMARCA4-214ENST00000589677 TFRCP02786 760 aaKnown RBP15.2■□□□□ 0.02
SMARCA4-214ENST00000589677 RPL5P46777 297 aaKnown RBP15.2■□□□□ 0.02
SMARCA4-214ENST00000589677 KCTD21Q4G0X4 260 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms