RNA–Protein interactions for RNA: ENST00000589655.1

RAB3D-202, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB3D, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-202ENST00000589655 POU5F1Q01860 360 aaKnown RBP17.44■□□□□ 0.38
RAB3D-202ENST00000589655 SMARCB1Q12824 385 aa17.44■□□□□ 0.38
RAB3D-202ENST00000589655 SF3A2Q15428 464 aaKnown RBP17.44■□□□□ 0.38
RAB3D-202ENST00000589655 SF3A1Q15459 793 aaKnown RBP17.44■□□□□ 0.38
RAB3D-202ENST00000589655 CCDC6Q16204 474 aa17.44■□□□□ 0.38
RAB3D-202ENST00000589655 CCDC142Q17RM4 750 aa17.44■□□□□ 0.38
RAB3D-202ENST00000589655 SDHAF4Q5VUM1 108 aa17.44■□□□□ 0.38
RAB3D-202ENST00000589655 SLFN12LQ6IEE8 588 aa17.44■□□□□ 0.38
RAB3D-202ENST00000589655 CXorf38Q8TB03 319 aa17.44■□□□□ 0.38
RAB3D-202ENST00000589655 EPSTI1Q96J88 318 aa17.44■□□□□ 0.38
RAB3D-202ENST00000589655 GCNAQ96QF7 691 aa17.44■□□□□ 0.38
RAB3D-202ENST00000589655 THG1LQ9NWX6 298 aaKnown RBP17.44■□□□□ 0.38
RAB3D-202ENST00000589655 USP24Q9UPU5 2620 aa17.43■□□□□ 0.38
RAB3D-202ENST00000589655 ZNF638Q14966 1978 aaKnown RBP17.43■□□□□ 0.38
RAB3D-202ENST00000589655 AXIN1O15169 862 aa17.43■□□□□ 0.38
RAB3D-202ENST00000589655 EGFP01133 1207 aa17.43■□□□□ 0.38
RAB3D-202ENST00000589655 ABCD1P33897 745 aa17.43■□□□□ 0.38
RAB3D-202ENST00000589655 RAP1GAPP47736 663 aa17.43■□□□□ 0.38
RAB3D-202ENST00000589655 TAF12Q16514 161 aa17.43■□□□□ 0.38
RAB3D-202ENST00000589655 DYMQ7RTS9 669 aa17.43■□□□□ 0.38
RAB3D-202ENST00000589655 KBTBD6Q86V97 674 aa17.43■□□□□ 0.38
RAB3D-202ENST00000589655 DCP1BQ8IZD4 617 aaKnown RBP17.43■□□□□ 0.38
RAB3D-202ENST00000589655 PDCL2Q8N4E4 241 aa17.43■□□□□ 0.38
RAB3D-202ENST00000589655 GAB3Q8WWW8 586 aa17.43■□□□□ 0.38
RAB3D-202ENST00000589655 PKMYT1Q99640 499 aa17.43■□□□□ 0.38
RAB3D-202ENST00000589655 PI4K2AQ9BTU6 479 aa17.43■□□□□ 0.38
RAB3D-202ENST00000589655 ARRDC1-AS1Q9H2J1 176 aa17.43■□□□□ 0.38
RAB3D-202ENST00000589655 TDP1Q9NUW8 608 aa17.43■□□□□ 0.38
RAB3D-202ENST00000589655 L1RE1Q9UN81 338 aa17.43■□□□□ 0.38
RAB3D-202ENST00000589655 PCDHB5Q9Y5E4 795 aa17.43■□□□□ 0.38
RAB3D-202ENST00000589655 TM4SF5O14894 197 aa17.42■□□□□ 0.38
RAB3D-202ENST00000589655 AVPR1AP37288 418 aa17.42■□□□□ 0.38
RAB3D-202ENST00000589655 SV2CQ496J9 727 aa17.42■□□□□ 0.38
RAB3D-202ENST00000589655 MON1AQ86VX9 555 aa17.42■□□□□ 0.38
RAB3D-202ENST00000589655 C1orf127Q8N9H9 656 aa17.42■□□□□ 0.38
RAB3D-202ENST00000589655 RASSF8Q8NHQ8 419 aa17.42■□□□□ 0.38
RAB3D-202ENST00000589655 POMGNT1Q8WZA1 660 aa17.42■□□□□ 0.38
RAB3D-202ENST00000589655 EZH1Q92800 747 aaPredicted RBP17.42■□□□□ 0.38
RAB3D-202ENST00000589655 SLC22A12Q96S37 553 aa17.42■□□□□ 0.38
RAB3D-202ENST00000589655 ZMYM5Q9UJ78 669 aa17.42■□□□□ 0.38
RAB3D-202ENST00000589655 CCDC163A0A0D9SF12 145 aa17.41■□□□□ 0.38
RAB3D-202ENST00000589655 HCRTO43612 131 aa17.41■□□□□ 0.38
RAB3D-202ENST00000589655 RNF40O75150 1001 aa17.41■□□□□ 0.38
RAB3D-202ENST00000589655 PRPF40AO75400 957 aaKnown RBP17.41■□□□□ 0.38
RAB3D-202ENST00000589655 RPP40O75818 363 aaKnown RBP17.41■□□□□ 0.38
RAB3D-202ENST00000589655 EPN2O95208 641 aa17.41■□□□□ 0.38
RAB3D-202ENST00000589655 IL18RAPO95256 599 aa17.41■□□□□ 0.38
RAB3D-202ENST00000589655 BMP15O95972 392 aa17.41■□□□□ 0.38
RAB3D-202ENST00000589655 ACAT1P24752 427 aaKnown RBP17.41■□□□□ 0.38
RAB3D-202ENST00000589655 CYP2F1P24903 491 aa17.41■□□□□ 0.38
RAB3D-202ENST00000589655 DDX6P26196 483 aaKnown RBP eCLIP17.41■□□□□ 0.38
RAB3D-202ENST00000589655 POLR2BP30876 1174 aaKnown RBP17.41■□□□□ 0.38
RAB3D-202ENST00000589655 GALK1P51570 392 aa17.41■□□□□ 0.38
RAB3D-202ENST00000589655 GRSF1Q12849 480 aaKnown RBP eCLIP17.41■□□□□ 0.38
RAB3D-202ENST00000589655 PTPAQ15257 358 aa17.41■□□□□ 0.38
RAB3D-202ENST00000589655 DDR2Q16832 855 aa17.41■□□□□ 0.38
RAB3D-202ENST00000589655 LARP1BQ659C4 914 aaKnown RBP17.41■□□□□ 0.38
RAB3D-202ENST00000589655 OSTM1Q86WC4 334 aa17.41■□□□□ 0.38
RAB3D-202ENST00000589655 NT5DC4Q86YG4 428 aa17.41■□□□□ 0.38
RAB3D-202ENST00000589655 KRI1Q8N9T8 703 aaKnown RBP17.41■□□□□ 0.38
RAB3D-202ENST00000589655 LEO1Q8WVC0 666 aaPredicted RBP17.41■□□□□ 0.38
RAB3D-202ENST00000589655 HVCN1Q96D96 273 aa17.41■□□□□ 0.38
RAB3D-202ENST00000589655 DNAJC19Q96DA6 116 aa17.41■□□□□ 0.38
RAB3D-202ENST00000589655 SAAL1Q96ER3 474 aa17.41■□□□□ 0.38
RAB3D-202ENST00000589655 ZNF560Q96MR9 790 aa17.41■□□□□ 0.38
RAB3D-202ENST00000589655 FAM213AQ9BRX8 229 aa17.41■□□□□ 0.38
RAB3D-202ENST00000589655 KIF9Q9HAQ2 790 aa17.41■□□□□ 0.38
RAB3D-202ENST00000589655 MAGED2Q9UNF1 606 aaPredicted RBP17.41■□□□□ 0.38
RAB3D-202ENST00000589655 SMC3Q9UQE7 1217 aa17.41■□□□□ 0.38
RAB3D-202ENST00000589655 MYO16Q9Y6X6 1858 aa17.4■□□□□ 0.38
RAB3D-202ENST00000589655 MYMKA6NI61 221 aa17.4■□□□□ 0.38
RAB3D-202ENST00000589655 SOBPA7XYQ1 873 aa17.4■□□□□ 0.38
RAB3D-202ENST00000589655 NOL4O94818 638 aa17.4■□□□□ 0.38
RAB3D-202ENST00000589655 ITGB3P05106 788 aa17.4■□□□□ 0.38
RAB3D-202ENST00000589655 ZNF806P0C7X5 589 aa17.4■□□□□ 0.38
RAB3D-202ENST00000589655 CSH1P0DML2 217 aa17.4■□□□□ 0.38
RAB3D-202ENST00000589655 CSH2P0DML3 217 aa17.4■□□□□ 0.38
RAB3D-202ENST00000589655 GJA4P35212 333 aa17.4■□□□□ 0.38
RAB3D-202ENST00000589655 CASP5P51878 434 aa17.4■□□□□ 0.38
RAB3D-202ENST00000589655 LIMK1P53667 647 aa17.4■□□□□ 0.38
RAB3D-202ENST00000589655 TFAMQ00059 246 aaKnown RBP17.4■□□□□ 0.38
RAB3D-202ENST00000589655 BFSP1Q12934 665 aa17.4■□□□□ 0.38
RAB3D-202ENST00000589655 ZNF268Q14587 947 aaPredicted RBP17.4■□□□□ 0.38
RAB3D-202ENST00000589655 PLA2G2CQ5R387 149 aa17.4■□□□□ 0.38
RAB3D-202ENST00000589655 CACNA2D4Q7Z3S7 1137 aa17.4■□□□□ 0.38
RAB3D-202ENST00000589655 BRAPQ7Z569 592 aa17.4■□□□□ 0.38
RAB3D-202ENST00000589655 BRSK2Q8IWQ3 736 aa17.4■□□□□ 0.38
RAB3D-202ENST00000589655 LOXL4Q96JB6 756 aa17.4■□□□□ 0.38
RAB3D-202ENST00000589655 MYRFLQ96LU7 910 aa17.4■□□□□ 0.38
RAB3D-202ENST00000589655 CYP2S1Q96SQ9 504 aa17.4■□□□□ 0.38
RAB3D-202ENST00000589655 ACBD6Q9BR61 282 aa17.4■□□□□ 0.38
RAB3D-202ENST00000589655 FGFBP2Q9BYJ0 223 aa17.4■□□□□ 0.38
RAB3D-202ENST00000589655 SMOC1Q9H4F8 434 aa17.4■□□□□ 0.38
RAB3D-202ENST00000589655 DDX43Q9NXZ2 648 aaKnown RBP17.4■□□□□ 0.38
RAB3D-202ENST00000589655 TBC1D7Q9P0N9 293 aa17.4■□□□□ 0.38
RAB3D-202ENST00000589655 AGAP1Q9UPQ3 857 aa17.4■□□□□ 0.38
RAB3D-202ENST00000589655 CLIC4Q9Y696 253 aa17.4■□□□□ 0.38
RAB3D-202ENST00000589655 KIAA1549LQ6ZVL6 1849 aa17.4■□□□□ 0.38
RAB3D-202ENST00000589655 ANAPC1Q9H1A4 1944 aa17.39■□□□□ 0.37
RAB3D-202ENST00000589655 FOXD2O60548 495 aaPredicted RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms