RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 SPPL3Q8TCT6 385 aa9.11□□□□□ -0.95
DNMT1-219ENST00000589349 URGCPQ8TCY9 931 aa9.11□□□□□ -0.95
DNMT1-219ENST00000589349 LPPQ93052 612 aa9.11□□□□□ -0.95
DNMT1-219ENST00000589349 PGBD4Q96DM1 585 aa9.11□□□□□ -0.95
DNMT1-219ENST00000589349 Q96M66 194 aa9.11□□□□□ -0.95
DNMT1-219ENST00000589349 TRIM6Q9C030 488 aaPredicted RBP9.11□□□□□ -0.95
DNMT1-219ENST00000589349 WRAP73Q9P2S5 460 aaPredicted RBP9.11□□□□□ -0.95
DNMT1-219ENST00000589349 TCF20Q9UGU0 1960 aaKnown RBP9.1□□□□□ -0.95
DNMT1-219ENST00000589349 ARHGEF35A5YM69 484 aa9.1□□□□□ -0.95
DNMT1-219ENST00000589349 LRRIQ4A6NIV6 560 aa9.1□□□□□ -0.95
DNMT1-219ENST00000589349 NT5C1B-RDH14C9J2C7 533 aa9.1□□□□□ -0.95
DNMT1-219ENST00000589349 C5orf67F2Z3F1 127 aa9.1□□□□□ -0.95
DNMT1-219ENST00000589349 TNFRSF10CO14798 259 aa9.1□□□□□ -0.95
DNMT1-219ENST00000589349 ASAP2O43150 1006 aa9.1□□□□□ -0.95
DNMT1-219ENST00000589349 ZC3H11AO75152 810 aaKnown RBP eCLIP9.1□□□□□ -0.95
DNMT1-219ENST00000589349 UBOX5O94941 541 aa9.1□□□□□ -0.95
DNMT1-219ENST00000589349 STBD1O95210 358 aa9.1□□□□□ -0.95
DNMT1-219ENST00000589349 GTF2F1P35269 517 aaKnown RBP eCLIP9.1□□□□□ -0.95
DNMT1-219ENST00000589349 CCT6AP40227 531 aaKnown RBP9.1□□□□□ -0.95
DNMT1-219ENST00000589349 ST3GAL1Q11201 340 aa9.1□□□□□ -0.95
DNMT1-219ENST00000589349 MXD4Q14582 209 aaPredicted RBP9.1□□□□□ -0.95
DNMT1-219ENST00000589349 FBXW10Q5XX13 1052 aa9.1□□□□□ -0.95
DNMT1-219ENST00000589349 KCNT2Q6UVM3 1135 aa9.1□□□□□ -0.95
DNMT1-219ENST00000589349 B3GNT9Q6UX72 402 aa9.1□□□□□ -0.95
DNMT1-219ENST00000589349 SRGAP1Q7Z6B7 1085 aa9.1□□□□□ -0.95
DNMT1-219ENST00000589349 NOSTRINQ8IVI9 506 aa9.1□□□□□ -0.95
DNMT1-219ENST00000589349 LINC01465Q8N7H1 131 aa9.1□□□□□ -0.95
DNMT1-219ENST00000589349 NEK9Q8TD19 979 aa9.1□□□□□ -0.95
DNMT1-219ENST00000589349 P2RX5Q93086 422 aa9.1□□□□□ -0.95
DNMT1-219ENST00000589349 PABPC5Q96DU9 382 aaKnown RBP9.1□□□□□ -0.95
DNMT1-219ENST00000589349 TCF25Q9BQ70 676 aa9.1□□□□□ -0.95
DNMT1-219ENST00000589349 MRPL9Q9BYD2 267 aaKnown RBP9.1□□□□□ -0.95
DNMT1-219ENST00000589349 RAB34Q9BZG1 259 aa9.1□□□□□ -0.95
DNMT1-219ENST00000589349 POLR3FQ9H1D9 316 aaPredicted RBP9.1□□□□□ -0.95
DNMT1-219ENST00000589349 TMEM60Q9H2L4 133 aa9.1□□□□□ -0.95
DNMT1-219ENST00000589349 FOXP1Q9H334 677 aaPredicted RBP9.1□□□□□ -0.95
DNMT1-219ENST00000589349 ELAC1Q9H777 363 aaKnown RBP9.1□□□□□ -0.95
DNMT1-219ENST00000589349 TLR9Q9NR96 1032 aa9.1□□□□□ -0.95
DNMT1-219ENST00000589349 CHST12Q9NRB3 414 aa9.1□□□□□ -0.95
DNMT1-219ENST00000589349 SPG21Q9NZD8 308 aa9.1□□□□□ -0.95
DNMT1-219ENST00000589349 ADGRE2Q9UHX3 823 aa9.1□□□□□ -0.95
DNMT1-219ENST00000589349 SMC3Q9UQE7 1217 aa9.1□□□□□ -0.95
DNMT1-219ENST00000589349 A0A0U1RQF3 1178 aa9.09□□□□□ -0.95
DNMT1-219ENST00000589349 LINC01565O15544 149 aa9.09□□□□□ -0.95
DNMT1-219ENST00000589349 SSBP05455 408 aaKnown RBP eCLIP9.09□□□□□ -0.95
DNMT1-219ENST00000589349 SRGAP2BP0DMP2 458 aa9.09□□□□□ -0.95
DNMT1-219ENST00000589349 ITGA4P13612 1032 aa9.09□□□□□ -0.95
DNMT1-219ENST00000589349 IL9P15248 144 aa9.09□□□□□ -0.95
DNMT1-219ENST00000589349 DNAJB1P25685 340 aa9.09□□□□□ -0.95
DNMT1-219ENST00000589349 ERCC5P28715 1186 aaPredicted RBP9.09□□□□□ -0.95
DNMT1-219ENST00000589349 SOX9P48436 509 aa9.09□□□□□ -0.95
DNMT1-219ENST00000589349 RAB27AP51159 221 aa9.09□□□□□ -0.95
DNMT1-219ENST00000589349 FAM189BP81408 668 aa9.09□□□□□ -0.95
DNMT1-219ENST00000589349 ZP2Q05996 745 aa9.09□□□□□ -0.95
DNMT1-219ENST00000589349 HYAL1Q12794 435 aa9.09□□□□□ -0.95
DNMT1-219ENST00000589349 LEXMQ3ZCV2 418 aa9.09□□□□□ -0.95
DNMT1-219ENST00000589349 SLC23A3Q6PIS1 610 aa9.09□□□□□ -0.95
DNMT1-219ENST00000589349 FAM43BQ6ZT52 329 aaPredicted RBP9.09□□□□□ -0.95
DNMT1-219ENST00000589349 TMPRSS7Q7RTY8 843 aa9.09□□□□□ -0.95
DNMT1-219ENST00000589349 ADGRD2Q7Z7M1 963 aa9.09□□□□□ -0.95
DNMT1-219ENST00000589349 FERMT3Q86UX7 667 aa9.09□□□□□ -0.95
DNMT1-219ENST00000589349 HACE1Q8IYU2 909 aa9.09□□□□□ -0.95
DNMT1-219ENST00000589349 FBXO18Q8NFZ0 1043 aa9.09□□□□□ -0.95
DNMT1-219ENST00000589349 RASSF8Q8NHQ8 419 aa9.09□□□□□ -0.95
DNMT1-219ENST00000589349 UBE2FQ969M7 185 aa9.09□□□□□ -0.95
DNMT1-219ENST00000589349 TMEM169Q96HH4 297 aa9.09□□□□□ -0.95
DNMT1-219ENST00000589349 CPB2Q96IY4 423 aa9.09□□□□□ -0.95
DNMT1-219ENST00000589349 CASD1Q96PB1 797 aa9.09□□□□□ -0.95
DNMT1-219ENST00000589349 APOL5Q9BWW9 433 aa9.09□□□□□ -0.95
DNMT1-219ENST00000589349 GPR62Q9BZJ7 368 aa9.09□□□□□ -0.95
DNMT1-219ENST00000589349 DHX33Q9H6R0 707 aaKnown RBP9.09□□□□□ -0.95
DNMT1-219ENST00000589349 ATP13A1Q9HD20 1204 aa9.09□□□□□ -0.95
DNMT1-219ENST00000589349 ANKEF1Q9NU02 776 aa9.09□□□□□ -0.95
DNMT1-219ENST00000589349 GPATCH2Q9NW75 528 aa9.09□□□□□ -0.95
DNMT1-219ENST00000589349 PPT2Q9UMR5 302 aa9.09□□□□□ -0.95
DNMT1-219ENST00000589349 EFR3BQ9Y2G0 817 aa9.09□□□□□ -0.95
DNMT1-219ENST00000589349 PCDHB2Q9Y5E7 798 aa9.09□□□□□ -0.95
DNMT1-219ENST00000589349 SIP14410 1827 aa9.09□□□□□ -0.95
DNMT1-219ENST00000589349 COL4A4P53420 1690 aaPredicted RBP9.09□□□□□ -0.95
DNMT1-219ENST00000589349 LOXHD1Q8IVV2 1947 aa9.09□□□□□ -0.95
DNMT1-219ENST00000589349 TTC3P53804 2025 aa9.09□□□□□ -0.95
DNMT1-219ENST00000589349 EYSQ5T1H1 3165 aa9.08□□□□□ -0.96
DNMT1-219ENST00000589349 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.08□□□□□ -0.96
DNMT1-219ENST00000589349 IGKV6-21A0A0C4DH24 114 aa9.08□□□□□ -0.96
DNMT1-219ENST00000589349 CLEC3AO75596 197 aa9.08□□□□□ -0.96
DNMT1-219ENST00000589349 CXCL14O95715 111 aa9.08□□□□□ -0.96
DNMT1-219ENST00000589349 POMCP01189 267 aa9.08□□□□□ -0.96
DNMT1-219ENST00000589349 GJB2P29033 226 aa9.08□□□□□ -0.96
DNMT1-219ENST00000589349 POLR2BP30876 1174 aaKnown RBP9.08□□□□□ -0.96
DNMT1-219ENST00000589349 PPM1AP35813 382 aa9.08□□□□□ -0.96
DNMT1-219ENST00000589349 BCAR1P56945 870 aa9.08□□□□□ -0.96
DNMT1-219ENST00000589349 UBE3AQ05086 875 aa9.08□□□□□ -0.96
DNMT1-219ENST00000589349 NOMO2Q5JPE7 1267 aa9.08□□□□□ -0.96
DNMT1-219ENST00000589349 CLLU1OSQ5K130 101 aa9.08□□□□□ -0.96
DNMT1-219ENST00000589349 HAUS3Q68CZ6 603 aa9.08□□□□□ -0.96
DNMT1-219ENST00000589349 CBLL1Q75N03 491 aa9.08□□□□□ -0.96
DNMT1-219ENST00000589349 CATSPER3Q86XQ3 398 aa9.08□□□□□ -0.96
DNMT1-219ENST00000589349 ZBTB8OSQ8IWT0 167 aa9.08□□□□□ -0.96
DNMT1-219ENST00000589349 RBBP8NLQ8NC74 664 aaPredicted RBP9.08□□□□□ -0.96
DNMT1-219ENST00000589349 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms