RNA–Protein interactions for RNA: ENST00000589174.1

MRPL54-202, Transcript of mitochondrial ribosomal protein L54, humanhuman

TSL 3

Gene MRPL54, Length 491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54-202ENST00000589174 POLR2BP30876 1174 aaKnown RBP11.88□□□□□ -0.51
MRPL54-202ENST00000589174 HOXA6P31267 233 aa11.88□□□□□ -0.51
MRPL54-202ENST00000589174 HOXD13P35453 343 aa11.88□□□□□ -0.51
MRPL54-202ENST00000589174 MCM2P49736 904 aa11.88□□□□□ -0.51
MRPL54-202ENST00000589174 NRLP54845 237 aa11.88□□□□□ -0.51
MRPL54-202ENST00000589174 RESTQ13127 1097 aa11.88□□□□□ -0.51
MRPL54-202ENST00000589174 CUL4AQ13619 759 aa11.88□□□□□ -0.51
MRPL54-202ENST00000589174 SF3A2Q15428 464 aaKnown RBP11.88□□□□□ -0.51
MRPL54-202ENST00000589174 DDR2Q16832 855 aa11.88□□□□□ -0.51
MRPL54-202ENST00000589174 GAB4Q2WGN9 574 aa11.88□□□□□ -0.51
MRPL54-202ENST00000589174 LARP1BQ659C4 914 aaKnown RBP11.88□□□□□ -0.51
MRPL54-202ENST00000589174 LMBRD2Q68DH5 695 aaPredicted RBP11.88□□□□□ -0.51
MRPL54-202ENST00000589174 ARMCX5Q6P1M9 558 aa11.88□□□□□ -0.51
MRPL54-202ENST00000589174 LIMS2Q7Z4I7 341 aa11.88□□□□□ -0.51
MRPL54-202ENST00000589174 WDR5BQ86VZ2 330 aa11.88□□□□□ -0.51
MRPL54-202ENST00000589174 BRSK2Q8IWQ3 736 aa11.88□□□□□ -0.51
MRPL54-202ENST00000589174 HPS3Q969F9 1004 aa11.88□□□□□ -0.51
MRPL54-202ENST00000589174 MSANTD3Q96H12 275 aa11.88□□□□□ -0.51
MRPL54-202ENST00000589174 CYP2S1Q96SQ9 504 aa11.88□□□□□ -0.51
MRPL54-202ENST00000589174 RTKNQ9BST9 563 aa11.88□□□□□ -0.51
MRPL54-202ENST00000589174 GMEB2Q9UKD1 530 aa11.88□□□□□ -0.51
MRPL54-202ENST00000589174 CDV3Q9UKY7 258 aaKnown RBP11.88□□□□□ -0.51
MRPL54-202ENST00000589174 LAMA1P25391 3075 aa11.88□□□□□ -0.51
MRPL54-202ENST00000589174 TNRC6BQ9UPQ9 1833 aaKnown RBP11.88□□□□□ -0.51
MRPL54-202ENST00000589174 PRR5-ARHGAP8B1AHC4 643 aa11.87□□□□□ -0.51
MRPL54-202ENST00000589174 TRDMT1O14717 391 aaKnown RBP11.87□□□□□ -0.51
MRPL54-202ENST00000589174 EIF5BO60841 1220 aaKnown RBP11.87□□□□□ -0.51
MRPL54-202ENST00000589174 ATP2C2O75185 946 aa11.87□□□□□ -0.51
MRPL54-202ENST00000589174 ITGB3P05106 788 aa11.87□□□□□ -0.51
MRPL54-202ENST00000589174 CDC25CP30307 473 aa11.87□□□□□ -0.51
MRPL54-202ENST00000589174 RAP1GAPP47736 663 aa11.87□□□□□ -0.51
MRPL54-202ENST00000589174 TUFMP49411 452 aaKnown RBP11.87□□□□□ -0.51
MRPL54-202ENST00000589174 ARHGAP8P85298 464 aa11.87□□□□□ -0.51
MRPL54-202ENST00000589174 MESP2Q0VG99 397 aa11.87□□□□□ -0.51
MRPL54-202ENST00000589174 RUNX3Q13761 415 aa11.87□□□□□ -0.51
MRPL54-202ENST00000589174 LRRC32Q14392 662 aa11.87□□□□□ -0.51
MRPL54-202ENST00000589174 CSRP2Q16527 193 aa11.87□□□□□ -0.51
MRPL54-202ENST00000589174 ITPRIPL2Q3MIP1 535 aa11.87□□□□□ -0.51
MRPL54-202ENST00000589174 DGKKQ5KSL6 1271 aa11.87□□□□□ -0.51
MRPL54-202ENST00000589174 ITIH5Q86UX2 942 aa11.87□□□□□ -0.51
MRPL54-202ENST00000589174 KBTBD6Q86V97 674 aa11.87□□□□□ -0.51
MRPL54-202ENST00000589174 SFTPA1Q8IWL2 248 aa11.87□□□□□ -0.51
MRPL54-202ENST00000589174 GPR161Q8N6U8 529 aaKnown RBP11.87□□□□□ -0.51
MRPL54-202ENST00000589174 OR5B17Q8NGF7 314 aa11.87□□□□□ -0.51
MRPL54-202ENST00000589174 SPPL2BQ8TCT7 592 aa11.87□□□□□ -0.51
MRPL54-202ENST00000589174 KBTBD7Q8WVZ9 684 aa11.87□□□□□ -0.51
MRPL54-202ENST00000589174 POMGNT1Q8WZA1 660 aa11.87□□□□□ -0.51
MRPL54-202ENST00000589174 FAM213AQ9BRX8 229 aa11.87□□□□□ -0.51
MRPL54-202ENST00000589174 PDE11AQ9HCR9 933 aa11.87□□□□□ -0.51
MRPL54-202ENST00000589174 TMEM30AQ9NV96 361 aa11.87□□□□□ -0.51
MRPL54-202ENST00000589174 GCNT4Q9P109 453 aa11.87□□□□□ -0.51
MRPL54-202ENST00000589174 SMC3Q9UQE7 1217 aa11.87□□□□□ -0.51
MRPL54-202ENST00000589174 CNOT1A5YKK6 2376 aaKnown RBP11.87□□□□□ -0.51
MRPL54-202ENST00000589174 ACACBO00763 2458 aa11.87□□□□□ -0.51
MRPL54-202ENST00000589174 EPG5Q9HCE0 2579 aa11.86□□□□□ -0.51
MRPL54-202ENST00000589174 C2orf78A6NCI8 922 aa11.86□□□□□ -0.51
MRPL54-202ENST00000589174 DPYSL4O14531 572 aa11.86□□□□□ -0.51
MRPL54-202ENST00000589174 GABRDO14764 452 aa11.86□□□□□ -0.51
MRPL54-202ENST00000589174 RNF40O75150 1001 aa11.86□□□□□ -0.51
MRPL54-202ENST00000589174 TBCAO75347 108 aaKnown RBP11.86□□□□□ -0.51
MRPL54-202ENST00000589174 NOL4O94818 638 aa11.86□□□□□ -0.51
MRPL54-202ENST00000589174 KRT18P05783 430 aaKnown RBP11.86□□□□□ -0.51
MRPL54-202ENST00000589174 LMO2P25791 158 aa11.86□□□□□ -0.51
MRPL54-202ENST00000589174 POU5F1Q01860 360 aaKnown RBP11.86□□□□□ -0.51
MRPL54-202ENST00000589174 USP4Q13107 963 aa11.86□□□□□ -0.51
MRPL54-202ENST00000589174 ZNF77Q15935 545 aa11.86□□□□□ -0.51
MRPL54-202ENST00000589174 SOWAHAQ2M3V2 549 aa11.86□□□□□ -0.51
MRPL54-202ENST00000589174 INTS6LQ5JSJ4 861 aaKnown RBP11.86□□□□□ -0.51
MRPL54-202ENST00000589174 L1TD1Q5T7N2 865 aaKnown RBP11.86□□□□□ -0.51
MRPL54-202ENST00000589174 FAM200AQ8TCP9 573 aa11.86□□□□□ -0.51
MRPL54-202ENST00000589174 LEO1Q8WVC0 666 aaPredicted RBP11.86□□□□□ -0.51
MRPL54-202ENST00000589174 GZF1Q9H116 711 aaPredicted RBP11.86□□□□□ -0.51
MRPL54-202ENST00000589174 PCIF1Q9H4Z3 704 aa11.86□□□□□ -0.51
MRPL54-202ENST00000589174 DDX43Q9NXZ2 648 aaKnown RBP11.86□□□□□ -0.51
MRPL54-202ENST00000589174 GTF3C4Q9UKN8 822 aa11.86□□□□□ -0.51
MRPL54-202ENST00000589174 DSEQ9UL01 958 aa11.86□□□□□ -0.51
MRPL54-202ENST00000589174 AGAP1Q9UPQ3 857 aa11.86□□□□□ -0.51
MRPL54-202ENST00000589174 SRPRBQ9Y5M8 271 aaKnown RBP11.86□□□□□ -0.51
MRPL54-202ENST00000589174 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.86□□□□□ -0.51
MRPL54-202ENST00000589174 THADAQ6YHU6 1953 aa11.85□□□□□ -0.51
MRPL54-202ENST00000589174 DCLK1O15075 740 aa11.85□□□□□ -0.51
MRPL54-202ENST00000589174 AXIN1O15169 862 aa11.85□□□□□ -0.51
MRPL54-202ENST00000589174 LRP3O75074 770 aa11.85□□□□□ -0.51
MRPL54-202ENST00000589174 PRPF40AO75400 957 aaKnown RBP11.85□□□□□ -0.51
MRPL54-202ENST00000589174 PRPF6O94906 941 aaKnown RBP11.85□□□□□ -0.51
MRPL54-202ENST00000589174 HNRNPLP14866 589 aaKnown RBP eCLIP11.85□□□□□ -0.51
MRPL54-202ENST00000589174 SCP2P22307 547 aa11.85□□□□□ -0.51
MRPL54-202ENST00000589174 GJA4P35212 333 aa11.85□□□□□ -0.51
MRPL54-202ENST00000589174 GALK1P51570 392 aa11.85□□□□□ -0.51
MRPL54-202ENST00000589174 CACNA2D1P54289 1103 aa11.85□□□□□ -0.51
MRPL54-202ENST00000589174 USP46P62068 366 aa11.85□□□□□ -0.51
MRPL54-202ENST00000589174 TFAMQ00059 246 aaKnown RBP11.85□□□□□ -0.51
MRPL54-202ENST00000589174 PLCB2Q00722 1185 aa11.85□□□□□ -0.51
MRPL54-202ENST00000589174 SV2CQ496J9 727 aa11.85□□□□□ -0.51
MRPL54-202ENST00000589174 ARHGAP15Q53QZ3 475 aa11.85□□□□□ -0.51
MRPL54-202ENST00000589174 PPM1JQ5JR12 505 aa11.85□□□□□ -0.51
MRPL54-202ENST00000589174 PLA2G2CQ5R387 149 aa11.85□□□□□ -0.51
MRPL54-202ENST00000589174 SLFN12LQ6IEE8 588 aa11.85□□□□□ -0.51
MRPL54-202ENST00000589174 TCEAL6Q6IPX3 200 aa11.85□□□□□ -0.51
MRPL54-202ENST00000589174 FAM171BQ6P995 826 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms