RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 RPS6KA5O75582 802 aa9.28□□□□□ -0.92
SMAD4-206ENST00000588860 MICAL2O94851 1124 aa9.28□□□□□ -0.92
SMAD4-206ENST00000588860 CD4P01730 458 aa9.28□□□□□ -0.92
SMAD4-206ENST00000588860 HMGCRP04035 888 aa9.28□□□□□ -0.92
SMAD4-206ENST00000588860 ASGR1P07306 291 aa9.28□□□□□ -0.92
SMAD4-206ENST00000588860 MYBL2P10244 700 aa9.28□□□□□ -0.92
SMAD4-206ENST00000588860 VDRP11473 427 aa9.28□□□□□ -0.92
SMAD4-206ENST00000588860 ATF7P17544 494 aaPredicted RBP9.28□□□□□ -0.92
SMAD4-206ENST00000588860 HOXD10P28358 340 aa9.28□□□□□ -0.92
SMAD4-206ENST00000588860 TNFRSF8P28908 595 aa9.28□□□□□ -0.92
SMAD4-206ENST00000588860 SSR1P43307 286 aaKnown RBP9.28□□□□□ -0.92
SMAD4-206ENST00000588860 INCA1Q0VD86 236 aa9.28□□□□□ -0.92
SMAD4-206ENST00000588860 DSG2Q14126 1118 aa9.28□□□□□ -0.92
SMAD4-206ENST00000588860 ZBTB6Q15916 424 aa9.28□□□□□ -0.92
SMAD4-206ENST00000588860 SGO2Q562F6 1265 aa9.28□□□□□ -0.92
SMAD4-206ENST00000588860 C9orf57Q5W0N0 161 aa9.28□□□□□ -0.92
SMAD4-206ENST00000588860 DPH6Q7L8W6 267 aa9.28□□□□□ -0.92
SMAD4-206ENST00000588860 SERINC5Q86VE9 423 aa9.28□□□□□ -0.92
SMAD4-206ENST00000588860 SESTD1Q86VW0 696 aa9.28□□□□□ -0.92
SMAD4-206ENST00000588860 PLPP6Q8IY26 295 aa9.28□□□□□ -0.92
SMAD4-206ENST00000588860 WDTC1Q8N5D0 677 aa9.28□□□□□ -0.92
SMAD4-206ENST00000588860 LRRC52Q8N7C0 313 aa9.28□□□□□ -0.92
SMAD4-206ENST00000588860 SMG8Q8ND04 991 aaKnown RBP9.28□□□□□ -0.92
SMAD4-206ENST00000588860 KLHDC9Q8NEP7 349 aa9.28□□□□□ -0.92
SMAD4-206ENST00000588860 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.28□□□□□ -0.92
SMAD4-206ENST00000588860 PTCD2Q8WV60 388 aaKnown RBP9.28□□□□□ -0.92
SMAD4-206ENST00000588860 WNT8BQ93098 351 aa9.28□□□□□ -0.92
SMAD4-206ENST00000588860 ZNF560Q96MR9 790 aa9.28□□□□□ -0.92
SMAD4-206ENST00000588860 TSPAN18Q96SJ8 248 aa9.28□□□□□ -0.92
SMAD4-206ENST00000588860 FUT8Q9BYC5 575 aa9.28□□□□□ -0.92
SMAD4-206ENST00000588860 SENP6Q9GZR1 1112 aaPredicted RBP9.28□□□□□ -0.92
SMAD4-206ENST00000588860 CRISPLD2Q9H0B8 497 aa9.28□□□□□ -0.92
SMAD4-206ENST00000588860 LHX5Q9H2C1 402 aa9.28□□□□□ -0.92
SMAD4-206ENST00000588860 FAM124BQ9H5Z6 455 aaPredicted RBP9.28□□□□□ -0.92
SMAD4-206ENST00000588860 SYNCQ9H7C4 482 aa9.28□□□□□ -0.92
SMAD4-206ENST00000588860 FAM53CQ9NYF3 392 aa9.28□□□□□ -0.92
SMAD4-206ENST00000588860 IP6K2Q9UHH9 426 aa9.28□□□□□ -0.92
SMAD4-206ENST00000588860 STRIP2Q9ULQ0 834 aa9.28□□□□□ -0.92
SMAD4-206ENST00000588860 BARX2Q9UMQ3 279 aaPredicted RBP9.28□□□□□ -0.92
SMAD4-206ENST00000588860 ST3GAL5Q9UNP4 418 aa9.28□□□□□ -0.92
SMAD4-206ENST00000588860 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.28□□□□□ -0.92
SMAD4-206ENST00000588860 USTQ9Y2C2 406 aa9.28□□□□□ -0.92
SMAD4-206ENST00000588860 SNX9Q9Y5X1 595 aa9.28□□□□□ -0.92
SMAD4-206ENST00000588860 ZNF638Q14966 1978 aaKnown RBP9.27□□□□□ -0.93
SMAD4-206ENST00000588860 SMIM28A0A1B0GU29 152 aa9.27□□□□□ -0.93
SMAD4-206ENST00000588860 CHRNA1P02708 482 aa9.27□□□□□ -0.93
SMAD4-206ENST00000588860 RPLP2P05387 115 aaKnown RBP9.27□□□□□ -0.93
SMAD4-206ENST00000588860 GLI1P08151 1106 aa9.27□□□□□ -0.93
SMAD4-206ENST00000588860 PYGMP11217 842 aa9.27□□□□□ -0.93
SMAD4-206ENST00000588860 KCNE1P15382 129 aa9.27□□□□□ -0.93
SMAD4-206ENST00000588860 CST5P28325 142 aaPredicted RBP9.27□□□□□ -0.93
SMAD4-206ENST00000588860 MAN1A1P33908 653 aa9.27□□□□□ -0.93
SMAD4-206ENST00000588860 GJC1P36383 396 aa9.27□□□□□ -0.93
SMAD4-206ENST00000588860 THPOP40225 353 aa9.27□□□□□ -0.93
SMAD4-206ENST00000588860 PLA2G4AP47712 749 aa9.27□□□□□ -0.93
SMAD4-206ENST00000588860 PSMC1P62191 440 aaKnown RBP9.27□□□□□ -0.93
SMAD4-206ENST00000588860 CBX1P83916 185 aa9.27□□□□□ -0.93
SMAD4-206ENST00000588860 TAP1Q03518 808 aa9.27□□□□□ -0.93
SMAD4-206ENST00000588860 MGAT3Q09327 533 aa9.27□□□□□ -0.93
SMAD4-206ENST00000588860 PAK2Q13177 524 aa9.27□□□□□ -0.93
SMAD4-206ENST00000588860 CASP8Q14790 479 aa9.27□□□□□ -0.93
SMAD4-206ENST00000588860 PPP2R5EQ16537 467 aa9.27□□□□□ -0.93
SMAD4-206ENST00000588860 PTGISQ16647 500 aa9.27□□□□□ -0.93
SMAD4-206ENST00000588860 GOLGA7BQ2TAP0 167 aa9.27□□□□□ -0.93
SMAD4-206ENST00000588860 PTPN20Q4JDL3 420 aa9.27□□□□□ -0.93
SMAD4-206ENST00000588860 DAB2IPQ5VWQ8 1189 aa9.27□□□□□ -0.93
SMAD4-206ENST00000588860 DCUN1D2Q6PH85 259 aa9.27□□□□□ -0.93
SMAD4-206ENST00000588860 PCSK9Q8NBP7 692 aaKnown RBP9.27□□□□□ -0.93
SMAD4-206ENST00000588860 CCDC26Q8TAB7 109 aa9.27□□□□□ -0.93
SMAD4-206ENST00000588860 RAET1EQ8TD07 263 aa9.27□□□□□ -0.93
SMAD4-206ENST00000588860 AENQ8WTP8 325 aaKnown RBP9.27□□□□□ -0.93
SMAD4-206ENST00000588860 CASKIN2Q8WXE0 1202 aa9.27□□□□□ -0.93
SMAD4-206ENST00000588860 IFT81Q8WYA0 676 aa9.27□□□□□ -0.93
SMAD4-206ENST00000588860 MCEEQ96PE7 176 aa9.27□□□□□ -0.93
SMAD4-206ENST00000588860 MRPL45Q9BRJ2 306 aaKnown RBP9.27□□□□□ -0.93
SMAD4-206ENST00000588860 PLVAPQ9BX97 442 aa9.27□□□□□ -0.93
SMAD4-206ENST00000588860 NT5C1AQ9BXI3 368 aa9.27□□□□□ -0.93
SMAD4-206ENST00000588860 EPB41L5Q9HCM4 733 aa9.27□□□□□ -0.93
SMAD4-206ENST00000588860 ERVK-5Q9HDB9 667 aa9.27□□□□□ -0.93
SMAD4-206ENST00000588860 GDF3Q9NR23 364 aa9.27□□□□□ -0.93
SMAD4-206ENST00000588860 DDX20Q9UHI6 824 aaKnown RBP9.27□□□□□ -0.93
SMAD4-206ENST00000588860 CYTH4Q9UIA0 394 aa9.27□□□□□ -0.93
SMAD4-206ENST00000588860 LCMT1Q9UIC8 334 aa9.27□□□□□ -0.93
SMAD4-206ENST00000588860 L1RE1Q9UN81 338 aa9.27□□□□□ -0.93
SMAD4-206ENST00000588860 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.27□□□□□ -0.93
SMAD4-206ENST00000588860 TCRBV5S1A1TA0A578 114 aa9.26□□□□□ -0.93
SMAD4-206ENST00000588860 ESYT3A0FGR9 886 aa9.26□□□□□ -0.93
SMAD4-206ENST00000588860 TMEM191CA6NGB0 347 aa9.26□□□□□ -0.93
SMAD4-206ENST00000588860 ZSCAN5CA6NGD5 496 aaPredicted RBP9.26□□□□□ -0.93
SMAD4-206ENST00000588860 O00370 1275 aa9.26□□□□□ -0.93
SMAD4-206ENST00000588860 PIRO00625 290 aa9.26□□□□□ -0.93
SMAD4-206ENST00000588860 MAP2K7O14733 419 aa9.26□□□□□ -0.93
SMAD4-206ENST00000588860 SART1O43290 800 aaKnown RBP9.26□□□□□ -0.93
SMAD4-206ENST00000588860 PSTPIP1O43586 416 aa9.26□□□□□ -0.93
SMAD4-206ENST00000588860 PHF2O75151 1096 aa9.26□□□□□ -0.93
SMAD4-206ENST00000588860 ERBB2P04626 1255 aa9.26□□□□□ -0.93
SMAD4-206ENST00000588860 CYP3A5P20815 502 aa9.26□□□□□ -0.93
SMAD4-206ENST00000588860 EPHB4P54760 987 aa9.26□□□□□ -0.93
SMAD4-206ENST00000588860 TAS2R40P59535 323 aa9.26□□□□□ -0.93
SMAD4-206ENST00000588860 RPL7AP62424 266 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms