RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 MRPL9Q9BYD2 267 aaKnown RBP11.14□□□□□ -0.63
CHMP1B-202ENST00000588284 PARVAQ9NVD7 372 aa11.14□□□□□ -0.63
CHMP1B-202ENST00000588284 RNF14Q9UBS8 474 aa11.14□□□□□ -0.63
CHMP1B-202ENST00000588284 AMFRQ9UKV5 643 aa11.14□□□□□ -0.63
CHMP1B-202ENST00000588284 L1RE1Q9UN81 338 aa11.14□□□□□ -0.63
CHMP1B-202ENST00000588284 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.14□□□□□ -0.63
CHMP1B-202ENST00000588284 STXBP5LQ9Y2K9 1186 aa11.14□□□□□ -0.63
CHMP1B-202ENST00000588284 ABHD14A-ACY1A0A1B0GW23 586 aa11.13□□□□□ -0.63
CHMP1B-202ENST00000588284 CASTOR2A6NHX0 329 aa11.13□□□□□ -0.63
CHMP1B-202ENST00000588284 TMEM189-UBE2V1I3L0A0 370 aa11.13□□□□□ -0.63
CHMP1B-202ENST00000588284 O00370 1275 aa11.13□□□□□ -0.63
CHMP1B-202ENST00000588284 GABRDO14764 452 aa11.13□□□□□ -0.63
CHMP1B-202ENST00000588284 KIAA0355O15063 1070 aa11.13□□□□□ -0.63
CHMP1B-202ENST00000588284 MICAL2O94851 1124 aa11.13□□□□□ -0.63
CHMP1B-202ENST00000588284 SLU7O95391 586 aaKnown RBP11.13□□□□□ -0.63
CHMP1B-202ENST00000588284 PFKMP08237 780 aa11.13□□□□□ -0.63
CHMP1B-202ENST00000588284 PDGFRBP09619 1106 aa11.13□□□□□ -0.63
CHMP1B-202ENST00000588284 ODC1P11926 461 aa11.13□□□□□ -0.63
CHMP1B-202ENST00000588284 RAG1P15918 1043 aa11.13□□□□□ -0.63
CHMP1B-202ENST00000588284 PCSK1P29120 753 aa11.13□□□□□ -0.63
CHMP1B-202ENST00000588284 AFF1P51825 1210 aaKnown RBP11.13□□□□□ -0.63
CHMP1B-202ENST00000588284 SLC8A3P57103 927 aa11.13□□□□□ -0.63
CHMP1B-202ENST00000588284 DSC1Q08554 894 aa11.13□□□□□ -0.63
CHMP1B-202ENST00000588284 ZNF268Q14587 947 aaPredicted RBP11.13□□□□□ -0.63
CHMP1B-202ENST00000588284 RPS6KA1Q15418 735 aa11.13□□□□□ -0.63
CHMP1B-202ENST00000588284 WHAMMP3Q1A5X7 153 aa11.13□□□□□ -0.63
CHMP1B-202ENST00000588284 MEI1Q5TIA1 1274 aa11.13□□□□□ -0.63
CHMP1B-202ENST00000588284 DENND1BQ6P3S1 775 aa11.13□□□□□ -0.63
CHMP1B-202ENST00000588284 MON1BQ7L1V2 547 aa11.13□□□□□ -0.63
CHMP1B-202ENST00000588284 PEX26Q7Z412 305 aa11.13□□□□□ -0.63
CHMP1B-202ENST00000588284 DAAM2Q86T65 1068 aa11.13□□□□□ -0.63
CHMP1B-202ENST00000588284 ACOT1Q86TX2 421 aa11.13□□□□□ -0.63
CHMP1B-202ENST00000588284 PASD1Q8IV76 773 aa11.13□□□□□ -0.63
CHMP1B-202ENST00000588284 THEM5Q8N1Q8 247 aa11.13□□□□□ -0.63
CHMP1B-202ENST00000588284 PDCL2Q8N4E4 241 aa11.13□□□□□ -0.63
CHMP1B-202ENST00000588284 TMEM199Q8N511 208 aa11.13□□□□□ -0.63
CHMP1B-202ENST00000588284 CEP112Q8N8E3 955 aa11.13□□□□□ -0.63
CHMP1B-202ENST00000588284 STK32AQ8WU08 396 aa11.13□□□□□ -0.63
CHMP1B-202ENST00000588284 KBTBD7Q8WVZ9 684 aa11.13□□□□□ -0.63
CHMP1B-202ENST00000588284 ARHGEF26Q96DR7 871 aa11.13□□□□□ -0.63
CHMP1B-202ENST00000588284 ZSWIM1Q9BR11 485 aa11.13□□□□□ -0.63
CHMP1B-202ENST00000588284 NUP85Q9BW27 656 aa11.13□□□□□ -0.63
CHMP1B-202ENST00000588284 WNT8AQ9H1J5 351 aa11.13□□□□□ -0.63
CHMP1B-202ENST00000588284 HYOU1Q9Y4L1 999 aa11.13□□□□□ -0.63
CHMP1B-202ENST00000588284 CAPN6Q9Y6Q1 641 aa11.13□□□□□ -0.63
CHMP1B-202ENST00000588284 PDCD11Q14690 1871 aaKnown RBP11.12□□□□□ -0.63
CHMP1B-202ENST00000588284 GRID2IPA4D2P6 1211 aa11.12□□□□□ -0.63
CHMP1B-202ENST00000588284 CARNS1A5YM72 827 aa11.12□□□□□ -0.63
CHMP1B-202ENST00000588284 M0QZQ0 153 aa11.12□□□□□ -0.63
CHMP1B-202ENST00000588284 MYO1FO00160 1098 aa11.12□□□□□ -0.63
CHMP1B-202ENST00000588284 ATP1A1P05023 1023 aaKnown RBP11.12□□□□□ -0.63
CHMP1B-202ENST00000588284 CYP11A1P05108 521 aa11.12□□□□□ -0.63
CHMP1B-202ENST00000588284 CFHP08603 1231 aa11.12□□□□□ -0.63
CHMP1B-202ENST00000588284 PTPN1P18031 435 aaKnown RBP11.12□□□□□ -0.63
CHMP1B-202ENST00000588284 TYMPP19971 482 aa11.12□□□□□ -0.63
CHMP1B-202ENST00000588284 GPD2P43304 727 aa11.12□□□□□ -0.63
CHMP1B-202ENST00000588284 LRRC26Q2I0M4 334 aa11.12□□□□□ -0.63
CHMP1B-202ENST00000588284 TIGD5Q53EQ6 642 aa11.12□□□□□ -0.63
CHMP1B-202ENST00000588284 CLLU1OSQ5K130 101 aa11.12□□□□□ -0.63
CHMP1B-202ENST00000588284 WSCD1Q658N2 575 aa11.12□□□□□ -0.63
CHMP1B-202ENST00000588284 PLEKHA7Q6IQ23 1121 aa11.12□□□□□ -0.63
CHMP1B-202ENST00000588284 C11orf63Q6NUN7 778 aa11.12□□□□□ -0.63
CHMP1B-202ENST00000588284 MMS22LQ6ZRQ5 1243 aa11.12□□□□□ -0.63
CHMP1B-202ENST00000588284 DEFB128Q7Z7B8 93 aa11.12□□□□□ -0.63
CHMP1B-202ENST00000588284 DNAAF5Q86Y56 855 aa11.12□□□□□ -0.63
CHMP1B-202ENST00000588284 COLGALT2Q8IYK4 626 aa11.12□□□□□ -0.63
CHMP1B-202ENST00000588284 WDTC1Q8N5D0 677 aa11.12□□□□□ -0.63
CHMP1B-202ENST00000588284 LRRC57Q8N9N7 239 aa11.12□□□□□ -0.63
CHMP1B-202ENST00000588284 ANKRD52Q8NB46 1076 aa11.12□□□□□ -0.63
CHMP1B-202ENST00000588284 MNS1Q8NEH6 495 aa11.12□□□□□ -0.63
CHMP1B-202ENST00000588284 ZNF564Q8TBZ8 553 aaPredicted RBP11.12□□□□□ -0.63
CHMP1B-202ENST00000588284 IPO4Q8TEX9 1081 aaKnown RBP11.12□□□□□ -0.63
CHMP1B-202ENST00000588284 C18orf8Q96DM3 657 aa11.12□□□□□ -0.63
CHMP1B-202ENST00000588284 PBKQ96KB5 322 aa11.12□□□□□ -0.63
CHMP1B-202ENST00000588284 SUSD3Q96L08 255 aa11.12□□□□□ -0.63
CHMP1B-202ENST00000588284 CASD1Q96PB1 797 aa11.12□□□□□ -0.63
CHMP1B-202ENST00000588284 HNRNPABQ99729 332 aaKnown RBP11.12□□□□□ -0.63
CHMP1B-202ENST00000588284 C11orf70Q9BRQ4 267 aa11.12□□□□□ -0.63
CHMP1B-202ENST00000588284 TMEM175Q9BSA9 504 aa11.12□□□□□ -0.63
CHMP1B-202ENST00000588284 SELENOOQ9BVL4 669 aa11.12□□□□□ -0.63
CHMP1B-202ENST00000588284 SYNCQ9H7C4 482 aa11.12□□□□□ -0.63
CHMP1B-202ENST00000588284 ABCB6Q9NP58 842 aa11.12□□□□□ -0.63
CHMP1B-202ENST00000588284 CYLDQ9NQC7 956 aa11.12□□□□□ -0.63
CHMP1B-202ENST00000588284 TBC1D13Q9NVG8 400 aa11.12□□□□□ -0.63
CHMP1B-202ENST00000588284 DDX43Q9NXZ2 648 aaKnown RBP11.12□□□□□ -0.63
CHMP1B-202ENST00000588284 TSPAN16Q9UKR8 245 aa11.12□□□□□ -0.63
CHMP1B-202ENST00000588284 CDH9Q9ULB4 789 aa11.12□□□□□ -0.63
CHMP1B-202ENST00000588284 SNX12Q9UMY4 172 aa11.12□□□□□ -0.63
CHMP1B-202ENST00000588284 MRFAP1Q9Y605 127 aa11.12□□□□□ -0.63
CHMP1B-202ENST00000588284 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.11□□□□□ -0.63
CHMP1B-202ENST00000588284 MIF4GDA9UHW6 222 aaKnown RBP11.11□□□□□ -0.63
CHMP1B-202ENST00000588284 M0QYV0 167 aa11.11□□□□□ -0.63
CHMP1B-202ENST00000588284 CES2O00748 559 aa11.11□□□□□ -0.63
CHMP1B-202ENST00000588284 ENC1O14682 589 aa11.11□□□□□ -0.63
CHMP1B-202ENST00000588284 BUB1BO60566 1050 aaPredicted RBP11.11□□□□□ -0.63
CHMP1B-202ENST00000588284 TADA2AO75478 443 aa11.11□□□□□ -0.63
CHMP1B-202ENST00000588284 DDHD2O94830 711 aa11.11□□□□□ -0.63
CHMP1B-202ENST00000588284 FGFR1P11362 822 aa11.11□□□□□ -0.63
CHMP1B-202ENST00000588284 RRM1P23921 792 aa11.11□□□□□ -0.63
CHMP1B-202ENST00000588284 LMO2P25791 158 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms