RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 MAB21L3Q8N8X9 362 aa14.9□□□□□ -0.02
CLPTM1-208ENST00000588274 FAM200AQ8TCP9 573 aa14.9□□□□□ -0.02
CLPTM1-208ENST00000588274 LEO1Q8WVC0 666 aaPredicted RBP14.9□□□□□ -0.02
CLPTM1-208ENST00000588274 SLC22A12Q96S37 553 aa14.9□□□□□ -0.02
CLPTM1-208ENST00000588274 PYM1Q9BRP8 204 aaKnown RBP14.9□□□□□ -0.02
CLPTM1-208ENST00000588274 STRA6Q9BX79 667 aa14.9□□□□□ -0.02
CLPTM1-208ENST00000588274 DUSP15Q9H1R2 295 aaPredicted RBP14.9□□□□□ -0.02
CLPTM1-208ENST00000588274 ST6GALNAC4Q9H4F1 302 aa14.9□□□□□ -0.02
CLPTM1-208ENST00000588274 ABI2Q9NYB9 513 aaPredicted RBP14.9□□□□□ -0.02
CLPTM1-208ENST00000588274 ANGPTL2Q9UKU9 493 aa14.9□□□□□ -0.02
CLPTM1-208ENST00000588274 DSEQ9UL01 958 aa14.9□□□□□ -0.02
CLPTM1-208ENST00000588274 WASF3Q9UPY6 502 aa14.9□□□□□ -0.02
CLPTM1-208ENST00000588274 PCDHGA5Q9Y5G8 931 aa14.9□□□□□ -0.02
CLPTM1-208ENST00000588274 TCHHQ07283 1943 aa14.9□□□□□ -0.02
CLPTM1-208ENST00000588274 SLC26A4O43511 780 aa14.89□□□□□ -0.03
CLPTM1-208ENST00000588274 PLCG1P19174 1290 aa14.89□□□□□ -0.03
CLPTM1-208ENST00000588274 USP4Q13107 963 aa14.89□□□□□ -0.03
CLPTM1-208ENST00000588274 MCM6Q14566 821 aa14.89□□□□□ -0.03
CLPTM1-208ENST00000588274 ZNF268Q14587 947 aaPredicted RBP14.89□□□□□ -0.03
CLPTM1-208ENST00000588274 ZNF77Q15935 545 aa14.89□□□□□ -0.03
CLPTM1-208ENST00000588274 SDHAF4Q5VUM1 108 aa14.89□□□□□ -0.03
CLPTM1-208ENST00000588274 MYCT1Q8N699 235 aa14.89□□□□□ -0.03
CLPTM1-208ENST00000588274 ZSWIM2Q8NEG5 633 aa14.89□□□□□ -0.03
CLPTM1-208ENST00000588274 RAD54LQ92698 747 aa14.89□□□□□ -0.03
CLPTM1-208ENST00000588274 FAM212AQ96EL1 285 aa14.89□□□□□ -0.03
CLPTM1-208ENST00000588274 FAM84AQ96KN4 292 aa14.89□□□□□ -0.03
CLPTM1-208ENST00000588274 AK8Q96MA6 479 aa14.89□□□□□ -0.03
CLPTM1-208ENST00000588274 HHIPQ96QV1 700 aa14.89□□□□□ -0.03
CLPTM1-208ENST00000588274 LSM14BQ9BX40 385 aaKnown RBP14.89□□□□□ -0.03
CLPTM1-208ENST00000588274 KIF9Q9HAQ2 790 aa14.89□□□□□ -0.03
CLPTM1-208ENST00000588274 TDP1Q9NUW8 608 aa14.89□□□□□ -0.03
CLPTM1-208ENST00000588274 THG1LQ9NWX6 298 aaKnown RBP14.89□□□□□ -0.03
CLPTM1-208ENST00000588274 DPP3Q9NY33 737 aa14.89□□□□□ -0.03
CLPTM1-208ENST00000588274 ZMYM5Q9UJ78 669 aa14.89□□□□□ -0.03
CLPTM1-208ENST00000588274 IGF2RP11717 2491 aa14.88□□□□□ -0.03
CLPTM1-208ENST00000588274 AKAP13Q12802 2813 aa14.88□□□□□ -0.03
CLPTM1-208ENST00000588274 ANTXRLA6NF34 631 aa14.88□□□□□ -0.03
CLPTM1-208ENST00000588274 SOBPA7XYQ1 873 aa14.88□□□□□ -0.03
CLPTM1-208ENST00000588274 KPNA7A9QM74 516 aa14.88□□□□□ -0.03
CLPTM1-208ENST00000588274 NOL4O94818 638 aa14.88□□□□□ -0.03
CLPTM1-208ENST00000588274 CD2BP2O95400 341 aaKnown RBP14.88□□□□□ -0.03
CLPTM1-208ENST00000588274 DDX6P26196 483 aaKnown RBP eCLIP14.88□□□□□ -0.03
CLPTM1-208ENST00000588274 GJA4P35212 333 aa14.88□□□□□ -0.03
CLPTM1-208ENST00000588274 POU5F1Q01860 360 aaKnown RBP14.88□□□□□ -0.03
CLPTM1-208ENST00000588274 GRSF1Q12849 480 aaKnown RBP eCLIP14.88□□□□□ -0.03
CLPTM1-208ENST00000588274 KARSQ15046 597 aaKnown RBP14.88□□□□□ -0.03
CLPTM1-208ENST00000588274 GAB4Q2WGN9 574 aa14.88□□□□□ -0.03
CLPTM1-208ENST00000588274 IL31Q6EBC2 164 aa14.88□□□□□ -0.03
CLPTM1-208ENST00000588274 MON1AQ86VX9 555 aa14.88□□□□□ -0.03
CLPTM1-208ENST00000588274 CAMKK1Q8N5S9 505 aa14.88□□□□□ -0.03
CLPTM1-208ENST00000588274 TRMT2BQ96GJ1 504 aaKnown RBP14.88□□□□□ -0.03
CLPTM1-208ENST00000588274 MYRFLQ96LU7 910 aa14.88□□□□□ -0.03
CLPTM1-208ENST00000588274 GCNAQ96QF7 691 aa14.88□□□□□ -0.03
CLPTM1-208ENST00000588274 TMEM121BQ9BXQ6 578 aaPredicted RBP14.88□□□□□ -0.03
CLPTM1-208ENST00000588274 L1RE1Q9UN81 338 aa14.88□□□□□ -0.03
CLPTM1-208ENST00000588274 HELZP42694 1942 aaKnown RBP14.88□□□□□ -0.03
CLPTM1-208ENST00000588274 ANAPC1Q9H1A4 1944 aa14.88□□□□□ -0.03
CLPTM1-208ENST00000588274 DCLK1O15075 740 aa14.87□□□□□ -0.03
CLPTM1-208ENST00000588274 HCRTO43612 131 aa14.87□□□□□ -0.03
CLPTM1-208ENST00000588274 FAM13AO94988 1023 aa14.87□□□□□ -0.03
CLPTM1-208ENST00000588274 KCNK5O95279 499 aa14.87□□□□□ -0.03
CLPTM1-208ENST00000588274 AVPR1AP37288 418 aa14.87□□□□□ -0.03
CLPTM1-208ENST00000588274 GALK1P51570 392 aa14.87□□□□□ -0.03
CLPTM1-208ENST00000588274 KCNA1Q09470 495 aa14.87□□□□□ -0.03
CLPTM1-208ENST00000588274 ADALQ6DHV7 355 aa14.87□□□□□ -0.03
CLPTM1-208ENST00000588274 SYT13Q7L8C5 426 aa14.87□□□□□ -0.03
CLPTM1-208ENST00000588274 PDCL2Q8N4E4 241 aa14.87□□□□□ -0.03
CLPTM1-208ENST00000588274 C1orf127Q8N9H9 656 aa14.87□□□□□ -0.03
CLPTM1-208ENST00000588274 C12orf50Q8NA57 414 aaPredicted RBP14.87□□□□□ -0.03
CLPTM1-208ENST00000588274 CDK5RAP3Q96JB5 506 aa14.87□□□□□ -0.03
CLPTM1-208ENST00000588274 EBF1Q9UH73 591 aa14.87□□□□□ -0.03
CLPTM1-208ENST00000588274 AGO2Q9UKV8 859 aaKnown RBP14.87□□□□□ -0.03
CLPTM1-208ENST00000588274 PCDHB5Q9Y5E4 795 aa14.87□□□□□ -0.03
CLPTM1-208ENST00000588274 ATG2BQ96BY7 2078 aa14.87□□□□□ -0.03
CLPTM1-208ENST00000588274 PTPRDP23468 1912 aa14.86□□□□□ -0.03
CLPTM1-208ENST00000588274 ATG13O75143 517 aa14.86□□□□□ -0.03
CLPTM1-208ENST00000588274 CCDC192P0DO97 292 aa14.86□□□□□ -0.03
CLPTM1-208ENST00000588274 DRD1P21728 446 aa14.86□□□□□ -0.03
CLPTM1-208ENST00000588274 ZXDBP98169 803 aa14.86□□□□□ -0.03
CLPTM1-208ENST00000588274 DHX8Q14562 1220 aaKnown RBP14.86□□□□□ -0.03
CLPTM1-208ENST00000588274 MTF1Q14872 753 aa14.86□□□□□ -0.03
CLPTM1-208ENST00000588274 PDGFRLQ15198 375 aa14.86□□□□□ -0.03
CLPTM1-208ENST00000588274 PTPAQ15257 358 aa14.86□□□□□ -0.03
CLPTM1-208ENST00000588274 DDR2Q16832 855 aa14.86□□□□□ -0.03
CLPTM1-208ENST00000588274 EML3Q32P44 896 aa14.86□□□□□ -0.03
CLPTM1-208ENST00000588274 C8orf34Q49A92 452 aa14.86□□□□□ -0.03
CLPTM1-208ENST00000588274 MCTP1Q6DN14 999 aa14.86□□□□□ -0.03
CLPTM1-208ENST00000588274 OSTM1Q86WC4 334 aa14.86□□□□□ -0.03
CLPTM1-208ENST00000588274 RPLP0P6Q8NHW5 317 aa14.86□□□□□ -0.03
CLPTM1-208ENST00000588274 P2RY13Q9BPV8 354 aa14.86□□□□□ -0.03
CLPTM1-208ENST00000588274 PI4K2AQ9BTU6 479 aa14.86□□□□□ -0.03
CLPTM1-208ENST00000588274 ECT2Q9H8V3 914 aa14.86□□□□□ -0.03
CLPTM1-208ENST00000588274 ABCB6Q9NP58 842 aa14.86□□□□□ -0.03
CLPTM1-208ENST00000588274 VPS45Q9NRW7 570 aa14.86□□□□□ -0.03
CLPTM1-208ENST00000588274 PPP4R2Q9NY27 417 aa14.86□□□□□ -0.03
CLPTM1-208ENST00000588274 GCNT4Q9P109 453 aa14.86□□□□□ -0.03
CLPTM1-208ENST00000588274 RALYQ9UKM9 306 aaKnown RBP14.86□□□□□ -0.03
CLPTM1-208ENST00000588274 SLC8A2Q9UPR5 921 aa14.86□□□□□ -0.03
CLPTM1-208ENST00000588274 FREM2Q5SZK8 3169 aa14.86□□□□□ -0.03
CLPTM1-208ENST00000588274 ZFYVE26Q68DK2 2539 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms