RNA–Protein interactions for RNA: ENST00000587703.5

PTPN2-206, Transcript of protein tyrosine phosphatase, non-receptor type 2, human

TSL 3

Gene PTPN2, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN2-206	ENST00000587703	CYP4F2	P78329	520 aa		4.65	□□□□□ -1.67
PTPN2-206	ENST00000587703	TWIST1	Q15672	202 aa		4.65	□□□□□ -1.67
PTPN2-206	ENST00000587703	SHC4	Q6S5L8	630 aa		4.65	□□□□□ -1.67
PTPN2-206	ENST00000587703	NAPRT	Q6XQN6	538 aa		4.65	□□□□□ -1.67
PTPN2-206	ENST00000587703	TRIM72	Q6ZMU5	477 aa		4.65	□□□□□ -1.67
PTPN2-206	ENST00000587703	FAM118B	Q9BPY3	351 aa		4.65	□□□□□ -1.67
PTPN2-206	ENST00000587703	BRD9	Q9H8M2	597 aa		4.65	□□□□□ -1.67
PTPN2-206	ENST00000587703	SERHL	Q9NQF3	203 aa		4.65	□□□□□ -1.67
PTPN2-206	ENST00000587703	MAN1C1	Q9NR34	630 aa		4.65	□□□□□ -1.67
PTPN2-206	ENST00000587703	DUSP22	Q9NRW4	184 aa		4.65	□□□□□ -1.67
PTPN2-206	ENST00000587703	SIDT1	Q9NXL6	827 aa	Known RBP	4.65	□□□□□ -1.67
PTPN2-206	ENST00000587703	ZNF112	Q9UJU3	913 aa		4.65	□□□□□ -1.67
PTPN2-206	ENST00000587703	SH2B3	Q9UQQ2	575 aa		4.65	□□□□□ -1.67
PTPN2-206	ENST00000587703	PPM1D	O15297	605 aa		4.64	□□□□□ -1.67
PTPN2-206	ENST00000587703	SLC16A3	O15427	465 aa	Known RBP	4.64	□□□□□ -1.67
PTPN2-206	ENST00000587703	USP1	O94782	785 aa		4.64	□□□□□ -1.67
PTPN2-206	ENST00000587703	CLSTN1	O94985	981 aa		4.64	□□□□□ -1.67
PTPN2-206	ENST00000587703	OAZ2	O95190	189 aa		4.64	□□□□□ -1.67
PTPN2-206	ENST00000587703	PDHA1	P08559	390 aa		4.64	□□□□□ -1.67
PTPN2-206	ENST00000587703	NPS	P0C0P6	89 aa		4.64	□□□□□ -1.67
PTPN2-206	ENST00000587703	TMEM191B	P0C7N4	346 aa		4.64	□□□□□ -1.67
PTPN2-206	ENST00000587703	CPE	P16870	476 aa		4.64	□□□□□ -1.67
PTPN2-206	ENST00000587703	CHRM3	P20309	590 aa		4.64	□□□□□ -1.67
PTPN2-206	ENST00000587703	PSMC1	P62191	440 aa	Known RBP	4.64	□□□□□ -1.67
PTPN2-206	ENST00000587703	CERKL	Q49MI3	558 aa	Predicted RBP	4.64	□□□□□ -1.67
PTPN2-206	ENST00000587703	VPS53	Q5VIR6	699 aa		4.64	□□□□□ -1.67
PTPN2-206	ENST00000587703	PPP4R3A	Q6IN85	833 aa		4.64	□□□□□ -1.67
PTPN2-206	ENST00000587703	IRF2BP2	Q7Z5L9	587 aa		4.64	□□□□□ -1.67
PTPN2-206	ENST00000587703	DTX2	Q86UW9	622 aa		4.64	□□□□□ -1.67
PTPN2-206	ENST00000587703	AFAP1L2	Q8N4X5	818 aa		4.64	□□□□□ -1.67
PTPN2-206	ENST00000587703	CYP2W1	Q8TAV3	490 aa		4.64	□□□□□ -1.67
PTPN2-206	ENST00000587703	CLPTM1L	Q96KA5	538 aa		4.64	□□□□□ -1.67
PTPN2-206	ENST00000587703	NELL2	Q99435	816 aa		4.64	□□□□□ -1.67
PTPN2-206	ENST00000587703	GNL3L	Q9NVN8	582 aa	Known RBP	4.64	□□□□□ -1.67
PTPN2-206	ENST00000587703	CFAP97	Q9P2B7	532 aa		4.64	□□□□□ -1.67
PTPN2-206	ENST00000587703	RAD54B	Q9Y620	910 aa		4.64	□□□□□ -1.67
PTPN2-206	ENST00000587703	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		4.63	□□□□□ -1.67
PTPN2-206	ENST00000587703		H7C1Q1	480 aa		4.63	□□□□□ -1.67
PTPN2-206	ENST00000587703	ENPP3	O14638	875 aa		4.63	□□□□□ -1.67
PTPN2-206	ENST00000587703	GJB1	P08034	283 aa		4.63	□□□□□ -1.67
PTPN2-206	ENST00000587703	IL6R	P08887	468 aa	Predicted RBP	4.63	□□□□□ -1.67
PTPN2-206	ENST00000587703	ENG	P17813	658 aa		4.63	□□□□□ -1.67
PTPN2-206	ENST00000587703	CYP2C19	P33261	490 aa		4.63	□□□□□ -1.67
PTPN2-206	ENST00000587703	CLCN2	P51788	898 aa		4.63	□□□□□ -1.67
PTPN2-206	ENST00000587703	ZNF135	P52742	658 aa	Predicted RBP	4.63	□□□□□ -1.67
PTPN2-206	ENST00000587703	HABP2	Q14520	560 aa	Predicted RBP	4.63	□□□□□ -1.67
PTPN2-206	ENST00000587703	CT47A1	Q5JQC4	288 aa	Predicted RBP	4.63	□□□□□ -1.67
PTPN2-206	ENST00000587703	TMED8	Q6PL24	325 aa	Predicted RBP	4.63	□□□□□ -1.67
PTPN2-206	ENST00000587703	LRRC71	Q8N4P6	559 aa		4.63	□□□□□ -1.67
PTPN2-206	ENST00000587703	DAZAP1	Q96EP5	407 aa	Known RBP	4.63	□□□□□ -1.67
PTPN2-206	ENST00000587703	RITA1	Q96K30	269 aa		4.63	□□□□□ -1.67
PTPN2-206	ENST00000587703	FSD1L	Q9BXM9	530 aa		4.63	□□□□□ -1.67
PTPN2-206	ENST00000587703	KLHL13	Q9P2N7	655 aa		4.63	□□□□□ -1.67
PTPN2-206	ENST00000587703	ADAMTS5	Q9UNA0	930 aa		4.63	□□□□□ -1.67
PTPN2-206	ENST00000587703	TMA7	Q9Y2S6	64 aa	Known RBP	4.63	□□□□□ -1.67
PTPN2-206	ENST00000587703	SBNO2	Q9Y2G9	1366 aa		4.63	□□□□□ -1.67
PTPN2-206	ENST00000587703	LOC102724159	A0A0B4J2E5	919 aa		4.62	□□□□□ -1.67
PTPN2-206	ENST00000587703	TLDC2	A0PJX2	215 aa		4.62	□□□□□ -1.67
PTPN2-206	ENST00000587703	PLEKHD1	A6NEE1	506 aa		4.62	□□□□□ -1.67
PTPN2-206	ENST00000587703	RPLP2	P05387	115 aa	Known RBP	4.62	□□□□□ -1.67
PTPN2-206	ENST00000587703	LIPA	P38571	399 aa		4.62	□□□□□ -1.67
PTPN2-206	ENST00000587703	GCLC	P48506	637 aa	Predicted RBP	4.62	□□□□□ -1.67
PTPN2-206	ENST00000587703	GYS2	P54840	703 aa		4.62	□□□□□ -1.67
PTPN2-206	ENST00000587703	ERVK-21	P61565	698 aa		4.62	□□□□□ -1.67
PTPN2-206	ENST00000587703	HTRA4	P83105	476 aa	Predicted RBP	4.62	□□□□□ -1.67
PTPN2-206	ENST00000587703	PWP2	Q15269	919 aa	Known RBP	4.62	□□□□□ -1.67
PTPN2-206	ENST00000587703	CLUL1	Q15846	466 aa		4.62	□□□□□ -1.67
PTPN2-206	ENST00000587703	TREML2	Q5T2D2	321 aa		4.62	□□□□□ -1.67
PTPN2-206	ENST00000587703	SFRP4	Q6FHJ7	346 aa	Predicted RBP	4.62	□□□□□ -1.67
PTPN2-206	ENST00000587703	DLK2	Q6UY11	383 aa		4.62	□□□□□ -1.67
PTPN2-206	ENST00000587703	MAVS	Q7Z434	540 aa		4.62	□□□□□ -1.67
PTPN2-206	ENST00000587703	TICAM2	Q86XR7	235 aa		4.62	□□□□□ -1.67
PTPN2-206	ENST00000587703	SPATS2	Q86XZ4	545 aa	Known RBP	4.62	□□□□□ -1.67
PTPN2-206	ENST00000587703	C16orf52	Q8NHV5	167 aa		4.62	□□□□□ -1.67
PTPN2-206	ENST00000587703	CHAC2	Q8WUX2	184 aa		4.62	□□□□□ -1.67
PTPN2-206	ENST00000587703	COQ8B	Q96D53	544 aa		4.62	□□□□□ -1.67
PTPN2-206	ENST00000587703	VCPIP1	Q96JH7	1222 aa		4.62	□□□□□ -1.67
PTPN2-206	ENST00000587703	ZC3H10	Q96K80	434 aa	Known RBP	4.62	□□□□□ -1.67
PTPN2-206	ENST00000587703	MACROD1	Q9BQ69	325 aa		4.62	□□□□□ -1.67
PTPN2-206	ENST00000587703	GPR35	Q9HC97	309 aa		4.62	□□□□□ -1.67
PTPN2-206	ENST00000587703	TRIM75P	A6NK02	468 aa		4.61	□□□□□ -1.67
PTPN2-206	ENST00000587703	NDUFS2	O75306	463 aa		4.61	□□□□□ -1.67
PTPN2-206	ENST00000587703	VPS4B	O75351	444 aa		4.61	□□□□□ -1.67
PTPN2-206	ENST00000587703	CHRM5	P08912	532 aa	Predicted RBP	4.61	□□□□□ -1.67
PTPN2-206	ENST00000587703	ATP5F1	P24539	256 aa	Predicted RBP	4.61	□□□□□ -1.67
PTPN2-206	ENST00000587703	IL1R2	P27930	398 aa		4.61	□□□□□ -1.67
PTPN2-206	ENST00000587703	THBS3	P49746	956 aa		4.61	□□□□□ -1.67
PTPN2-206	ENST00000587703	TCF15	Q12870	199 aa		4.61	□□□□□ -1.67
PTPN2-206	ENST00000587703	ICE2	Q659A1	982 aa		4.61	□□□□□ -1.67
PTPN2-206	ENST00000587703	ACRBP	Q8NEB7	543 aa		4.61	□□□□□ -1.67
PTPN2-206	ENST00000587703	RP9	Q8TA86	221 aa	Known RBP	4.61	□□□□□ -1.67
PTPN2-206	ENST00000587703	CUL5	Q93034	780 aa		4.61	□□□□□ -1.67
PTPN2-206	ENST00000587703	RIPOR2	Q9Y4F9	1068 aa		4.61	□□□□□ -1.67
PTPN2-206	ENST00000587703	POC1B-GALNT4	F8VUJ3	575 aa		4.6	□□□□□ -1.67
PTPN2-206	ENST00000587703	UBE2Q2L	H0YL09	131 aa		4.6	□□□□□ -1.67
PTPN2-206	ENST00000587703		K7ESF4	209 aa		4.6	□□□□□ -1.67
PTPN2-206	ENST00000587703	F2RL2	O00254	374 aa		4.6	□□□□□ -1.67
PTPN2-206	ENST00000587703	GPR39	O43194	453 aa		4.6	□□□□□ -1.67
PTPN2-206	ENST00000587703	RARB	P10826	455 aa		4.6	□□□□□ -1.67
PTPN2-206	ENST00000587703	PDE1A	P54750	535 aa		4.6	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms