RNA–Protein interactions for RNA: ENST00000587578.1

SOCS3-202, Transcript of suppressor of cytokine signaling 3, humanhuman

TSL 4

Gene SOCS3, Length 361 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3-202ENST00000587578 PUM1Q14671 1186 aaKnown RBP eCLIP19.68■□□□□ 0.74
SOCS3-202ENST00000587578 UBXN2BQ14CS0 331 aa19.68■□□□□ 0.74
SOCS3-202ENST00000587578 SV2CQ496J9 727 aa19.68■□□□□ 0.74
SOCS3-202ENST00000587578 SLC44A4Q53GD3 710 aa19.68■□□□□ 0.74
SOCS3-202ENST00000587578 LMBRD2Q68DH5 695 aaPredicted RBP19.68■□□□□ 0.74
SOCS3-202ENST00000587578 PDXDC1Q6P996 788 aa19.68■□□□□ 0.74
SOCS3-202ENST00000587578 NPAS3Q8IXF0 933 aa19.68■□□□□ 0.74
SOCS3-202ENST00000587578 ING5Q8WYH8 240 aa19.68■□□□□ 0.74
SOCS3-202ENST00000587578 BPIFA3Q9BQP9 254 aa19.68■□□□□ 0.74
SOCS3-202ENST00000587578 NAT10Q9H0A0 1025 aaKnown RBP19.68■□□□□ 0.74
SOCS3-202ENST00000587578 VRTNQ9H8Y1 702 aa19.68■□□□□ 0.74
SOCS3-202ENST00000587578 SPATA6Q9NWH7 488 aaPredicted RBP19.68■□□□□ 0.74
SOCS3-202ENST00000587578 DLL3Q9NYJ7 618 aa19.68■□□□□ 0.74
SOCS3-202ENST00000587578 AGAP1Q9UPQ3 857 aa19.68■□□□□ 0.74
SOCS3-202ENST00000587578 EPG5Q9HCE0 2579 aa19.68■□□□□ 0.74
SOCS3-202ENST00000587578 CACNA1BQ00975 2339 aa19.67■□□□□ 0.74
SOCS3-202ENST00000587578 PPEF2O14830 753 aa19.67■□□□□ 0.74
SOCS3-202ENST00000587578 PMM2O15305 246 aa19.67■□□□□ 0.74
SOCS3-202ENST00000587578 HOXA9P31269 272 aa19.67■□□□□ 0.74
SOCS3-202ENST00000587578 ATICP31939 592 aa19.67■□□□□ 0.74
SOCS3-202ENST00000587578 TPD52L1Q16890 204 aaPredicted RBP19.67■□□□□ 0.74
SOCS3-202ENST00000587578 ZSCAN23Q3MJ62 389 aa19.67■□□□□ 0.74
SOCS3-202ENST00000587578 CCDC40Q4G0X9 1142 aa19.67■□□□□ 0.74
SOCS3-202ENST00000587578 TDRD10Q5VZ19 366 aaKnown RBP19.67■□□□□ 0.74
SOCS3-202ENST00000587578 POTEHQ6S545 545 aa19.67■□□□□ 0.74
SOCS3-202ENST00000587578 RSPO2Q6UXX9 243 aaPredicted RBP19.67■□□□□ 0.74
SOCS3-202ENST00000587578 C11orf57Q6ZUT1 292 aaPredicted RBP19.67■□□□□ 0.74
SOCS3-202ENST00000587578 MTSS1LQ765P7 747 aa19.67■□□□□ 0.74
SOCS3-202ENST00000587578 SV2AQ7L0J3 742 aa19.67■□□□□ 0.74
SOCS3-202ENST00000587578 FAM114A1Q8IWE2 563 aa19.67■□□□□ 0.74
SOCS3-202ENST00000587578 TRIM59Q8IWR1 403 aa19.67■□□□□ 0.74
SOCS3-202ENST00000587578 SLC35C1Q96A29 364 aa19.67■□□□□ 0.74
SOCS3-202ENST00000587578 TMEM8AQ9HCN3 771 aa19.67■□□□□ 0.74
SOCS3-202ENST00000587578 LTB4R2Q9NPC1 389 aa19.67■□□□□ 0.74
SOCS3-202ENST00000587578 GDAP2Q9NXN4 497 aa19.67■□□□□ 0.74
SOCS3-202ENST00000587578 DNMT3BQ9UBC3 853 aaKnown RBP19.67■□□□□ 0.74
SOCS3-202ENST00000587578 PCDHB8Q9UN66 801 aa19.67■□□□□ 0.74
SOCS3-202ENST00000587578 R3HCC1Q9Y3T6 440 aaKnown RBP19.67■□□□□ 0.74
SOCS3-202ENST00000587578 SYCE3A1L190 88 aa19.66■□□□□ 0.74
SOCS3-202ENST00000587578 KPNA7A9QM74 516 aa19.66■□□□□ 0.74
SOCS3-202ENST00000587578 LAMTOR5O43504 91 aa19.66■□□□□ 0.74
SOCS3-202ENST00000587578 XYLBO75191 536 aa19.66■□□□□ 0.74
SOCS3-202ENST00000587578 CAVIN2O95810 425 aa19.66■□□□□ 0.74
SOCS3-202ENST00000587578 CST3P01034 146 aaPredicted RBP19.66■□□□□ 0.74
SOCS3-202ENST00000587578 PRKCSHP14314 528 aaPredicted RBP19.66■□□□□ 0.74
SOCS3-202ENST00000587578 OR1D2P34982 312 aa19.66■□□□□ 0.74
SOCS3-202ENST00000587578 BRCC3P46736 316 aa19.66■□□□□ 0.74
SOCS3-202ENST00000587578 PRKCQQ04759 706 aa19.66■□□□□ 0.74
SOCS3-202ENST00000587578 PPP3CAQ08209 521 aa19.66■□□□□ 0.74
SOCS3-202ENST00000587578 MYO1EQ12965 1108 aa19.66■□□□□ 0.74
SOCS3-202ENST00000587578 ZNF528Q3MIS6 628 aa19.66■□□□□ 0.74
SOCS3-202ENST00000587578 KRT39Q6A163 491 aa19.66■□□□□ 0.74
SOCS3-202ENST00000587578 IRF2BP1Q8IU81 584 aa19.66■□□□□ 0.74
SOCS3-202ENST00000587578 TMEM130Q8N3G9 435 aa19.66■□□□□ 0.74
SOCS3-202ENST00000587578 BCO2Q9BYV7 579 aa19.66■□□□□ 0.74
SOCS3-202ENST00000587578 DNAJC25Q9H1X3 360 aa19.66■□□□□ 0.74
SOCS3-202ENST00000587578 FAM170BA6NMN3 283 aa19.65■□□□□ 0.74
SOCS3-202ENST00000587578 SPTLC1O15269 473 aa19.65■□□□□ 0.74
SOCS3-202ENST00000587578 CYP11A1P05108 521 aa19.65■□□□□ 0.74
SOCS3-202ENST00000587578 KRT19P08727 400 aa19.65■□□□□ 0.74
SOCS3-202ENST00000587578 TRIM49P0CI25 452 aa19.65■□□□□ 0.74
SOCS3-202ENST00000587578 TRIM49CP0CI26 452 aa19.65■□□□□ 0.74
SOCS3-202ENST00000587578 TYMPP19971 482 aa19.65■□□□□ 0.74
SOCS3-202ENST00000587578 MYL5Q02045 173 aa19.65■□□□□ 0.74
SOCS3-202ENST00000587578 CSTF1Q05048 431 aaKnown RBP19.65■□□□□ 0.74
SOCS3-202ENST00000587578 RAB33AQ14088 237 aa19.65■□□□□ 0.74
SOCS3-202ENST00000587578 MRPL58Q14197 206 aaKnown RBP19.65■□□□□ 0.74
SOCS3-202ENST00000587578 RSPO4Q2I0M5 234 aaPredicted RBP19.65■□□□□ 0.74
SOCS3-202ENST00000587578 PABPC1LQ4VXU2 614 aaKnown RBP19.65■□□□□ 0.74
SOCS3-202ENST00000587578 ANKS3Q6ZW76 656 aa19.65■□□□□ 0.74
SOCS3-202ENST00000587578 DPH6Q7L8W6 267 aa19.65■□□□□ 0.74
SOCS3-202ENST00000587578 APPL2Q8NEU8 664 aa19.65■□□□□ 0.74
SOCS3-202ENST00000587578 SPATA18Q8TC71 538 aa19.65■□□□□ 0.74
SOCS3-202ENST00000587578 TAF4BQ92750 862 aa19.65■□□□□ 0.74
SOCS3-202ENST00000587578 OXCT2Q9BYC2 517 aaPredicted RBP19.65■□□□□ 0.74
SOCS3-202ENST00000587578 PLA2G2FQ9BZM2 168 aa19.65■□□□□ 0.74
SOCS3-202ENST00000587578 FBXO4Q9UKT5 387 aa19.65■□□□□ 0.74
SOCS3-202ENST00000587578 DSEQ9UL01 958 aa19.65■□□□□ 0.74
SOCS3-202ENST00000587578 COQ4Q9Y3A0 265 aa19.65■□□□□ 0.74
SOCS3-202ENST00000587578 SHISA7A6NL88 538 aa19.64■□□□□ 0.73
SOCS3-202ENST00000587578 TULP1O00294 542 aaPredicted RBP19.64■□□□□ 0.73
SOCS3-202ENST00000587578 P4HA2O15460 535 aa19.64■□□□□ 0.73
SOCS3-202ENST00000587578 PHACTR2O75167 634 aa19.64■□□□□ 0.73
SOCS3-202ENST00000587578 VNN1O95497 513 aa19.64■□□□□ 0.73
SOCS3-202ENST00000587578 POU2F2P09086 479 aa19.64■□□□□ 0.73
SOCS3-202ENST00000587578 FAM163BP0C2L3 166 aa19.64■□□□□ 0.73
SOCS3-202ENST00000587578 TARSP26639 723 aaKnown RBP19.64■□□□□ 0.73
SOCS3-202ENST00000587578 GCLMP48507 274 aa19.64■□□□□ 0.73
SOCS3-202ENST00000587578 BIRC3Q13489 604 aa19.64■□□□□ 0.73
SOCS3-202ENST00000587578 TRPC3Q13507 836 aa19.64■□□□□ 0.73
SOCS3-202ENST00000587578 NCOA4Q13772 614 aa19.64■□□□□ 0.73
SOCS3-202ENST00000587578 SLC5A9Q2M3M2 681 aa19.64■□□□□ 0.73
SOCS3-202ENST00000587578 SGSM1Q2NKQ1 1148 aa19.64■□□□□ 0.73
SOCS3-202ENST00000587578 ANO6Q4KMQ2 910 aa19.64■□□□□ 0.73
SOCS3-202ENST00000587578 DSTYKQ6XUX3 929 aa19.64■□□□□ 0.73
SOCS3-202ENST00000587578 TPRG1Q6ZUI0 275 aa19.64■□□□□ 0.73
SOCS3-202ENST00000587578 HPDLQ96IR7 371 aa19.64■□□□□ 0.73
SOCS3-202ENST00000587578 FAXDC2Q96IV6 333 aa19.64■□□□□ 0.73
SOCS3-202ENST00000587578 FAM84AQ96KN4 292 aa19.64■□□□□ 0.73
SOCS3-202ENST00000587578 SENP8Q96LD8 212 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms