RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 PDPRQ8NCN5 879 aa5.46□□□□□ -1.54
VMP1-205ENST00000587470 TMIEQ8NEW7 156 aa5.46□□□□□ -1.54
VMP1-205ENST00000587470 SLC30A5Q8TAD4 765 aa5.46□□□□□ -1.54
VMP1-205ENST00000587470 SNX19Q92543 992 aa5.46□□□□□ -1.54
VMP1-205ENST00000587470 FBXL20Q96IG2 436 aa5.46□□□□□ -1.54
VMP1-205ENST00000587470 PUS7Q96PZ0 661 aaKnown RBP5.46□□□□□ -1.54
VMP1-205ENST00000587470 VRK1Q99986 396 aaPredicted RBP5.46□□□□□ -1.54
VMP1-205ENST00000587470 SERPINB13Q9UIV8 391 aa5.46□□□□□ -1.54
VMP1-205ENST00000587470 SPEF1Q9Y4P9 236 aa5.46□□□□□ -1.54
VMP1-205ENST00000587470 DUOX2Q9NRD8 1548 aa5.46□□□□□ -1.54
VMP1-205ENST00000587470 KAT6AQ92794 2004 aa5.46□□□□□ -1.54
VMP1-205ENST00000587470 ADGBQ8N7X0 1667 aa5.46□□□□□ -1.54
VMP1-205ENST00000587470 ARHGEF17Q96PE2 2063 aaPredicted RBP5.46□□□□□ -1.54
VMP1-205ENST00000587470 TNKSO95271 1327 aa5.46□□□□□ -1.54
VMP1-205ENST00000587470 WASHC2CQ9Y4E1 1318 aa5.46□□□□□ -1.54
VMP1-205ENST00000587470 MSH6P52701 1360 aa5.45□□□□□ -1.54
VMP1-205ENST00000587470 CROCC2H7BZ55 1655 aa5.45□□□□□ -1.54
VMP1-205ENST00000587470 F2RL2O00254 374 aa5.45□□□□□ -1.54
VMP1-205ENST00000587470 TOR1BO14657 336 aa5.45□□□□□ -1.54
VMP1-205ENST00000587470 C1QL1O75973 258 aa5.45□□□□□ -1.54
VMP1-205ENST00000587470 MATN4O95460 622 aa5.45□□□□□ -1.54
VMP1-205ENST00000587470 MALP21145 153 aa5.45□□□□□ -1.54
VMP1-205ENST00000587470 DSC2Q02487 901 aa5.45□□□□□ -1.54
VMP1-205ENST00000587470 SNAPC2Q13487 334 aa5.45□□□□□ -1.54
VMP1-205ENST00000587470 ODF1Q14990 250 aa5.45□□□□□ -1.54
VMP1-205ENST00000587470 PTPRRQ15256 657 aa5.45□□□□□ -1.54
VMP1-205ENST00000587470 PREPLQ4J6C6 727 aaPredicted RBP5.45□□□□□ -1.54
VMP1-205ENST00000587470 TMPRSS9Q7Z410 1059 aa5.45□□□□□ -1.54
VMP1-205ENST00000587470 ADGRG5Q8IZF4 528 aa5.45□□□□□ -1.54
VMP1-205ENST00000587470 NSUN7Q8NE18 718 aaKnown RBP5.45□□□□□ -1.54
VMP1-205ENST00000587470 ZNF384Q8TF68 577 aa5.45□□□□□ -1.54
VMP1-205ENST00000587470 LPIN2Q92539 896 aa5.45□□□□□ -1.54
VMP1-205ENST00000587470 LRIG1Q96JA1 1093 aa5.45□□□□□ -1.54
VMP1-205ENST00000587470 PGBD1Q96JS3 809 aa5.45□□□□□ -1.54
VMP1-205ENST00000587470 KLK15Q9H2R5 256 aa5.45□□□□□ -1.54
VMP1-205ENST00000587470 GNL3LQ9NVN8 582 aaKnown RBP5.45□□□□□ -1.54
VMP1-205ENST00000587470 ANKRD50Q9ULJ7 1429 aa5.45□□□□□ -1.54
VMP1-205ENST00000587470 COL16A1Q07092 1604 aaPredicted RBP5.45□□□□□ -1.54
VMP1-205ENST00000587470 SMARCA1P28370 1054 aa5.44□□□□□ -1.54
VMP1-205ENST00000587470 GRIA3P42263 894 aa5.44□□□□□ -1.54
VMP1-205ENST00000587470 EVA1CP58658 441 aa5.44□□□□□ -1.54
VMP1-205ENST00000587470 NAIPQ13075 1403 aa5.44□□□□□ -1.54
VMP1-205ENST00000587470 CCDC93Q567U6 631 aa5.44□□□□□ -1.54
VMP1-205ENST00000587470 AKNAD1Q5T1N1 836 aa5.44□□□□□ -1.54
VMP1-205ENST00000587470 TSHZ1Q6ZSZ6 1077 aa5.44□□□□□ -1.54
VMP1-205ENST00000587470 MIER2Q8N344 545 aa5.44□□□□□ -1.54
VMP1-205ENST00000587470 TOR1AIP2Q8NFQ8 470 aa5.44□□□□□ -1.54
VMP1-205ENST00000587470 POC1BQ8TC44 478 aa5.44□□□□□ -1.54
VMP1-205ENST00000587470 TFAP2BQ92481 460 aa5.44□□□□□ -1.54
VMP1-205ENST00000587470 SCAMP4Q969E2 229 aa5.44□□□□□ -1.54
VMP1-205ENST00000587470 UROC1Q96N76 676 aa5.44□□□□□ -1.54
VMP1-205ENST00000587470 ERBINQ96RT1 1412 aa5.44□□□□□ -1.54
VMP1-205ENST00000587470 TRIB1Q96RU8 372 aa5.44□□□□□ -1.54
VMP1-205ENST00000587470 TIMP4Q99727 224 aa5.44□□□□□ -1.54
VMP1-205ENST00000587470 SMOQ99835 787 aa5.44□□□□□ -1.54
VMP1-205ENST00000587470 BRD9Q9H8M2 597 aa5.44□□□□□ -1.54
VMP1-205ENST00000587470 RLIMQ9NVW2 624 aa5.44□□□□□ -1.54
VMP1-205ENST00000587470 POLHQ9Y253 713 aa5.44□□□□□ -1.54
VMP1-205ENST00000587470 EID1Q9Y6B2 187 aa5.44□□□□□ -1.54
VMP1-205ENST00000587470 MROH1Q8NDA8 1641 aa5.44□□□□□ -1.54
VMP1-205ENST00000587470 PZPP20742 1482 aa5.44□□□□□ -1.54
VMP1-205ENST00000587470 SHPRHQ149N8 1683 aa5.43□□□□□ -1.54
VMP1-205ENST00000587470 ZC3H13Q5T200 1668 aaKnown RBP5.43□□□□□ -1.54
VMP1-205ENST00000587470 NWD1Q149M9 1564 aa5.43□□□□□ -1.54
VMP1-205ENST00000587470 LRRC3CA6NJW4 275 aa5.43□□□□□ -1.54
VMP1-205ENST00000587470 NT5C1B-RDH14C9J2C7 533 aa5.43□□□□□ -1.54
VMP1-205ENST00000587470 POLRMTO00411 1230 aaKnown RBP5.43□□□□□ -1.54
VMP1-205ENST00000587470 ARIH2O95376 493 aa5.43□□□□□ -1.54
VMP1-205ENST00000587470 GNAI3P08754 354 aa5.43□□□□□ -1.54
VMP1-205ENST00000587470 MAPK10P53779 464 aa5.43□□□□□ -1.54
VMP1-205ENST00000587470 NXPH1P58417 271 aa5.43□□□□□ -1.54
VMP1-205ENST00000587470 C1QTNF8P60827 252 aa5.43□□□□□ -1.54
VMP1-205ENST00000587470 GNAI1P63096 354 aa5.43□□□□□ -1.54
VMP1-205ENST00000587470 ZKSCAN2Q63HK3 967 aa5.43□□□□□ -1.54
VMP1-205ENST00000587470 TAPT1Q6NXT6 567 aa5.43□□□□□ -1.54
VMP1-205ENST00000587470 SLC4A10Q6U841 1118 aa5.43□□□□□ -1.54
VMP1-205ENST00000587470 PEG10Q86TG7 708 aaKnown RBP5.43□□□□□ -1.54
VMP1-205ENST00000587470 C3orf20Q8ND61 904 aa5.43□□□□□ -1.54
VMP1-205ENST00000587470 ASB6Q9NWX5 421 aa5.43□□□□□ -1.54
VMP1-205ENST00000587470 CFAP97Q9P2B7 532 aa5.43□□□□□ -1.54
VMP1-205ENST00000587470 ARPP21Q9UBL0 812 aaPredicted RBP5.43□□□□□ -1.54
VMP1-205ENST00000587470 TRPC5Q9UL62 973 aaPredicted RBP5.43□□□□□ -1.54
VMP1-205ENST00000587470 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.43□□□□□ -1.54
VMP1-205ENST00000587470 ENTPD2Q9Y5L3 495 aa5.43□□□□□ -1.54
VMP1-205ENST00000587470 SPATA31A3Q5VYP0 1347 aa5.43□□□□□ -1.54
VMP1-205ENST00000587470 HFM1A2PYH4 1435 aa5.42□□□□□ -1.54
VMP1-205ENST00000587470 NHSL1Q5SYE7 1610 aa5.42□□□□□ -1.54
VMP1-205ENST00000587470 E9PLN8 166 aa5.42□□□□□ -1.54
VMP1-205ENST00000587470 CHEK2O96017 543 aa5.42□□□□□ -1.54
VMP1-205ENST00000587470 HMGB1P09429 215 aaKnown RBP5.42□□□□□ -1.54
VMP1-205ENST00000587470 FTH1P19P0C7X4 201 aa5.42□□□□□ -1.54
VMP1-205ENST00000587470 WT1P19544 449 aaPredicted RBP5.42□□□□□ -1.54
VMP1-205ENST00000587470 FXR1P51114 621 aaKnown RBP eCLIP5.42□□□□□ -1.54
VMP1-205ENST00000587470 MC2RQ01718 297 aa5.42□□□□□ -1.54
VMP1-205ENST00000587470 ITIH3Q06033 890 aa5.42□□□□□ -1.54
VMP1-205ENST00000587470 THEMIS2Q5TEJ8 643 aa5.42□□□□□ -1.54
VMP1-205ENST00000587470 B3GALNT2Q8NCR0 500 aa5.42□□□□□ -1.54
VMP1-205ENST00000587470 MYCBPAPQ8TBZ2 947 aa5.42□□□□□ -1.54
VMP1-205ENST00000587470 VKORC1Q9BQB6 163 aa5.42□□□□□ -1.54
VMP1-205ENST00000587470 IL17RBQ9NRM6 502 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms