RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 CACTINQ8WUQ7 758 aaKnown RBP8.44□□□□□ -1.06
VMP1-204ENST00000587259 C18orf25Q96B23 403 aaPredicted RBP8.44□□□□□ -1.06
VMP1-204ENST00000587259 CLDN23Q96B33 292 aa8.44□□□□□ -1.06
VMP1-204ENST00000587259 HVCN1Q96D96 273 aa8.44□□□□□ -1.06
VMP1-204ENST00000587259 CNOT6LQ96LI5 555 aaKnown RBP8.44□□□□□ -1.06
VMP1-204ENST00000587259 ZMAT2Q96NC0 199 aaKnown RBP8.44□□□□□ -1.06
VMP1-204ENST00000587259 PPP1R10Q96QC0 940 aaKnown RBP8.44□□□□□ -1.06
VMP1-204ENST00000587259 PANX2Q96RD6 677 aa8.44□□□□□ -1.06
VMP1-204ENST00000587259 MED15Q96RN5 788 aa8.44□□□□□ -1.06
VMP1-204ENST00000587259 TUBGCP2Q9BSJ2 902 aa8.44□□□□□ -1.06
VMP1-204ENST00000587259 EPC1Q9H2F5 836 aa8.44□□□□□ -1.06
VMP1-204ENST00000587259 KCNF1Q9H3M0 494 aa8.44□□□□□ -1.06
VMP1-204ENST00000587259 ZHX3Q9H4I2 956 aa8.44□□□□□ -1.06
VMP1-204ENST00000587259 MRPL44Q9H9J2 332 aaKnown RBP8.44□□□□□ -1.06
VMP1-204ENST00000587259 PRMT8Q9NR22 394 aaPredicted RBP8.44□□□□□ -1.06
VMP1-204ENST00000587259 RBM12Q9NTZ6 932 aaKnown RBP8.44□□□□□ -1.06
VMP1-204ENST00000587259 ZSCAN32Q9NX65 697 aa8.44□□□□□ -1.06
VMP1-204ENST00000587259 FBXO4Q9UKT5 387 aa8.44□□□□□ -1.06
VMP1-204ENST00000587259 MAPK8IP1Q9UQF2 711 aa8.44□□□□□ -1.06
VMP1-204ENST00000587259 TRAF3IP3Q9Y228 551 aa8.44□□□□□ -1.06
VMP1-204ENST00000587259 PCDHGA2Q9Y5H1 932 aa8.44□□□□□ -1.06
VMP1-204ENST00000587259 ZFP37Q9Y6Q3 630 aaPredicted RBP8.44□□□□□ -1.06
VMP1-204ENST00000587259 KMT2BQ9UMN6 2715 aaPredicted RBP8.44□□□□□ -1.06
VMP1-204ENST00000587259 ZFHX4Q86UP3 3567 aa8.43□□□□□ -1.06
VMP1-204ENST00000587259 SMIM28A0A1B0GU29 152 aa8.43□□□□□ -1.06
VMP1-204ENST00000587259 TRIM49BA6NDI0 452 aa8.43□□□□□ -1.06
VMP1-204ENST00000587259 GOLGA8CPA6NN73 597 aa8.43□□□□□ -1.06
VMP1-204ENST00000587259 AKR1B15C9JRZ8 316 aaPredicted RBP8.43□□□□□ -1.06
VMP1-204ENST00000587259 PRRG1O14668 218 aa8.43□□□□□ -1.06
VMP1-204ENST00000587259 CETN3O15182 167 aa8.43□□□□□ -1.06
VMP1-204ENST00000587259 SPTLC1O15269 473 aa8.43□□□□□ -1.06
VMP1-204ENST00000587259 SLC16A3O15427 465 aaKnown RBP8.43□□□□□ -1.06
VMP1-204ENST00000587259 ZSCAN12O43309 604 aa8.43□□□□□ -1.06
VMP1-204ENST00000587259 MOSPD3O75425 235 aa8.43□□□□□ -1.06
VMP1-204ENST00000587259 ECI2O75521 394 aa8.43□□□□□ -1.06
VMP1-204ENST00000587259 HARSP12081 509 aaKnown RBP8.43□□□□□ -1.06
VMP1-204ENST00000587259 TDGF1P13385 188 aa8.43□□□□□ -1.06
VMP1-204ENST00000587259 GDI1P31150 447 aa8.43□□□□□ -1.06
VMP1-204ENST00000587259 PBX1P40424 430 aa8.43□□□□□ -1.06
VMP1-204ENST00000587259 PFKPQ01813 784 aa8.43□□□□□ -1.06
VMP1-204ENST00000587259 SATB1Q01826 763 aa8.43□□□□□ -1.06
VMP1-204ENST00000587259 UBXN1Q04323 297 aa8.43□□□□□ -1.06
VMP1-204ENST00000587259 TBX2Q13207 712 aaPredicted RBP8.43□□□□□ -1.06
VMP1-204ENST00000587259 MYBPC2Q14324 1141 aa8.43□□□□□ -1.06
VMP1-204ENST00000587259 GAS6Q14393 721 aa8.43□□□□□ -1.06
VMP1-204ENST00000587259 CCDC6Q16204 474 aa8.43□□□□□ -1.06
VMP1-204ENST00000587259 MAPK6Q16659 721 aa8.43□□□□□ -1.06
VMP1-204ENST00000587259 FAM187BQ17R55 369 aa8.43□□□□□ -1.06
VMP1-204ENST00000587259 KNOP1Q1ED39 458 aaKnown RBP8.43□□□□□ -1.06
VMP1-204ENST00000587259 PROX2Q3B8N5 592 aa8.43□□□□□ -1.06
VMP1-204ENST00000587259 ZCWPW2Q504Y3 356 aa8.43□□□□□ -1.06
VMP1-204ENST00000587259 ARSHQ5FYA8 562 aa8.43□□□□□ -1.06
VMP1-204ENST00000587259 FIGNQ5HY92 759 aa8.43□□□□□ -1.06
VMP1-204ENST00000587259 PRSS36Q5K4E3 855 aa8.43□□□□□ -1.06
VMP1-204ENST00000587259 DNTTIP2Q5QJE6 756 aaKnown RBP8.43□□□□□ -1.06
VMP1-204ENST00000587259 ATF7IP2Q5U623 682 aa8.43□□□□□ -1.06
VMP1-204ENST00000587259 ANKRD40Q6AI12 368 aa8.43□□□□□ -1.06
VMP1-204ENST00000587259 VITQ6UXI7 678 aa8.43□□□□□ -1.06
VMP1-204ENST00000587259 PRR23BQ6ZRT6 265 aa8.43□□□□□ -1.06
VMP1-204ENST00000587259 C1orf186Q6ZWK4 172 aa8.43□□□□□ -1.06
VMP1-204ENST00000587259 SFR1Q86XK3 245 aa8.43□□□□□ -1.06
VMP1-204ENST00000587259 GPR65Q8IYL9 337 aa8.43□□□□□ -1.06
VMP1-204ENST00000587259 MCPH1Q8NEM0 835 aa8.43□□□□□ -1.06
VMP1-204ENST00000587259 ZNF397Q8NF99 534 aaPredicted RBP8.43□□□□□ -1.06
VMP1-204ENST00000587259 DEPTORQ8TB45 409 aa8.43□□□□□ -1.06
VMP1-204ENST00000587259 NELL1Q92832 810 aa8.43□□□□□ -1.06
VMP1-204ENST00000587259 KIFAP3Q92845 792 aa8.43□□□□□ -1.06
VMP1-204ENST00000587259 RSPRY1Q96DX4 576 aa8.43□□□□□ -1.06
VMP1-204ENST00000587259 NAP1L5Q96NT1 182 aaPredicted RBP8.43□□□□□ -1.06
VMP1-204ENST00000587259 DUSP9Q99956 384 aaKnown RBP8.43□□□□□ -1.06
VMP1-204ENST00000587259 TMEM206Q9H813 350 aa8.43□□□□□ -1.06
VMP1-204ENST00000587259 BRD9Q9H8M2 597 aa8.43□□□□□ -1.06
VMP1-204ENST00000587259 CYP4F11Q9HBI6 524 aa8.43□□□□□ -1.06
VMP1-204ENST00000587259 METTL14Q9HCE5 456 aaKnown RBP8.43□□□□□ -1.06
VMP1-204ENST00000587259 RRAGDQ9NQL2 400 aaPredicted RBP8.43□□□□□ -1.06
VMP1-204ENST00000587259 CEP72Q9P209 647 aa8.43□□□□□ -1.06
VMP1-204ENST00000587259 CDV3Q9UKY7 258 aaKnown RBP8.43□□□□□ -1.06
VMP1-204ENST00000587259 TRIP11Q15643 1979 aa8.42□□□□□ -1.06
VMP1-204ENST00000587259 F5P12259 2224 aa8.42□□□□□ -1.06
VMP1-204ENST00000587259 MAP1BP46821 2468 aaKnown RBP8.42□□□□□ -1.06
VMP1-204ENST00000587259 CHD8Q9HCK8 2581 aa8.42□□□□□ -1.06
VMP1-204ENST00000587259 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.42□□□□□ -1.06
VMP1-204ENST00000587259 CHURC1-FNTBB4DL54 471 aa8.42□□□□□ -1.06
VMP1-204ENST00000587259 PES1O00541 588 aaKnown RBP8.42□□□□□ -1.06
VMP1-204ENST00000587259 ACKR2O00590 384 aa8.42□□□□□ -1.06
VMP1-204ENST00000587259 PODXLO00592 558 aa8.42□□□□□ -1.06
VMP1-204ENST00000587259 MFAP3LO75121 409 aa8.42□□□□□ -1.06
VMP1-204ENST00000587259 GCNT3O95395 438 aa8.42□□□□□ -1.06
VMP1-204ENST00000587259 C1RP00736 705 aa8.42□□□□□ -1.06
VMP1-204ENST00000587259 LRG1P02750 347 aa8.42□□□□□ -1.06
VMP1-204ENST00000587259 OR4Q2P0C623 313 aa8.42□□□□□ -1.06
VMP1-204ENST00000587259 MYL4P12829 197 aa8.42□□□□□ -1.06
VMP1-204ENST00000587259 PTPN2P17706 415 aa8.42□□□□□ -1.06
VMP1-204ENST00000587259 FNTBP49356 437 aa8.42□□□□□ -1.06
VMP1-204ENST00000587259 CCZ1BP86790 482 aa8.42□□□□□ -1.06
VMP1-204ENST00000587259 CCZ1P86791 482 aaPredicted RBP8.42□□□□□ -1.06
VMP1-204ENST00000587259 ADCY1Q08828 1119 aa8.42□□□□□ -1.06
VMP1-204ENST00000587259 TWF1Q12792 350 aa8.42□□□□□ -1.06
VMP1-204ENST00000587259 ELAVL2Q12926 359 aaKnown RBP8.42□□□□□ -1.06
VMP1-204ENST00000587259 TEAD2Q15562 447 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms