RNA–Protein interactions for RNA: ENST00000586495.1

TRIM47-203, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-203ENST00000586495 AGPAT3Q9NRZ7 376 aa18.22■□□□□ 0.51
TRIM47-203ENST00000586495 TMLHEQ9NVH6 421 aa18.22■□□□□ 0.51
TRIM47-203ENST00000586495 CGNQ9P2M7 1197 aaKnown RBP18.22■□□□□ 0.51
TRIM47-203ENST00000586495 NCANO14594 1321 aa18.22■□□□□ 0.51
TRIM47-203ENST00000586495 COL4A3Q01955 1670 aa18.22■□□□□ 0.51
TRIM47-203ENST00000586495 GABRDO14764 452 aa18.21■□□□□ 0.51
TRIM47-203ENST00000586495 AFMP43652 599 aa18.21■□□□□ 0.51
TRIM47-203ENST00000586495 CSTF1Q05048 431 aaKnown RBP18.21■□□□□ 0.51
TRIM47-203ENST00000586495 DNM1Q05193 864 aaKnown RBP18.21■□□□□ 0.51
TRIM47-203ENST00000586495 EHHADHQ08426 723 aa18.21■□□□□ 0.51
TRIM47-203ENST00000586495 FZD5Q13467 585 aa18.21■□□□□ 0.51
TRIM47-203ENST00000586495 SNRNP35Q16560 246 aaKnown RBP18.21■□□□□ 0.51
TRIM47-203ENST00000586495 GPIHBP1Q8IV16 184 aa18.21■□□□□ 0.51
TRIM47-203ENST00000586495 NELFCDQ8IXH7 590 aa18.21■□□□□ 0.51
TRIM47-203ENST00000586495 RDH13Q8NBN7 331 aa18.21■□□□□ 0.51
TRIM47-203ENST00000586495 OR5B17Q8NGF7 314 aa18.21■□□□□ 0.51
TRIM47-203ENST00000586495 BPIFB1Q8TDL5 484 aa18.21■□□□□ 0.51
TRIM47-203ENST00000586495 RSPRY1Q96DX4 576 aa18.21■□□□□ 0.51
TRIM47-203ENST00000586495 HPDLQ96IR7 371 aa18.21■□□□□ 0.51
TRIM47-203ENST00000586495 BLZF1Q9H2G9 400 aa18.21■□□□□ 0.51
TRIM47-203ENST00000586495 THG1LQ9NWX6 298 aaKnown RBP18.21■□□□□ 0.51
TRIM47-203ENST00000586495 RCOR1Q9UKL0 485 aa18.21■□□□□ 0.51
TRIM47-203ENST00000586495 GTF3C4Q9UKN8 822 aa18.21■□□□□ 0.51
TRIM47-203ENST00000586495 USP34Q70CQ2 3546 aa18.21■□□□□ 0.51
TRIM47-203ENST00000586495 F5P12259 2224 aa18.21■□□□□ 0.5
TRIM47-203ENST00000586495 SOBPA7XYQ1 873 aa18.2■□□□□ 0.5
TRIM47-203ENST00000586495 ARNTLO00327 626 aa18.2■□□□□ 0.5
TRIM47-203ENST00000586495 CLIC2O15247 247 aa18.2■□□□□ 0.5
TRIM47-203ENST00000586495 TGFB1I1O43294 461 aa18.2■□□□□ 0.5
TRIM47-203ENST00000586495 KINO60870 393 aaKnown RBP18.2■□□□□ 0.5
TRIM47-203ENST00000586495 TNNI1P19237 187 aa18.2■□□□□ 0.5
TRIM47-203ENST00000586495 ACAT1P24752 427 aaKnown RBP18.2■□□□□ 0.5
TRIM47-203ENST00000586495 CCNE1P24864 410 aa18.2■□□□□ 0.5
TRIM47-203ENST00000586495 DDX6P26196 483 aaKnown RBP eCLIP18.2■□□□□ 0.5
TRIM47-203ENST00000586495 KPNA1P52294 538 aaPredicted RBP18.2■□□□□ 0.5
TRIM47-203ENST00000586495 PLCB2Q00722 1185 aa18.2■□□□□ 0.5
TRIM47-203ENST00000586495 PKP1Q13835 747 aa18.2■□□□□ 0.5
TRIM47-203ENST00000586495 SOWAHAQ2M3V2 549 aa18.2■□□□□ 0.5
TRIM47-203ENST00000586495 SPATA2LQ8IUW3 424 aaPredicted RBP18.2■□□□□ 0.5
TRIM47-203ENST00000586495 CELF5Q8N6W0 485 aaKnown RBP18.2■□□□□ 0.5
TRIM47-203ENST00000586495 XXYLT1Q8NBI6 393 aa18.2■□□□□ 0.5
TRIM47-203ENST00000586495 SCFD1Q8WVM8 642 aa18.2■□□□□ 0.5
TRIM47-203ENST00000586495 FUBP3Q96I24 572 aaKnown RBP eCLIP18.2■□□□□ 0.5
TRIM47-203ENST00000586495 FAM84AQ96KN4 292 aa18.2■□□□□ 0.5
TRIM47-203ENST00000586495 LMAN1LQ9HAT1 526 aa18.2■□□□□ 0.5
TRIM47-203ENST00000586495 SLC39A2Q9NP94 309 aa18.2■□□□□ 0.5
TRIM47-203ENST00000586495 UXTQ9UBK9 157 aaPredicted RBP18.2■□□□□ 0.5
TRIM47-203ENST00000586495 MAGED2Q9UNF1 606 aaPredicted RBP18.2■□□□□ 0.5
TRIM47-203ENST00000586495 FAM186AA6NE01 2351 aa18.19■□□□□ 0.5
TRIM47-203ENST00000586495 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.19■□□□□ 0.5
TRIM47-203ENST00000586495 F11P03951 625 aa18.19■□□□□ 0.5
TRIM47-203ENST00000586495 DLATP10515 647 aaKnown RBP18.19■□□□□ 0.5
TRIM47-203ENST00000586495 HMGA1P17096 107 aaKnown RBP18.19■□□□□ 0.5
TRIM47-203ENST00000586495 CASP1P29466 404 aa18.19■□□□□ 0.5
TRIM47-203ENST00000586495 AVPR1AP37288 418 aa18.19■□□□□ 0.5
TRIM47-203ENST00000586495 CYP2J2P51589 502 aa18.19■□□□□ 0.5
TRIM47-203ENST00000586495 PPP2R5DQ14738 602 aa18.19■□□□□ 0.5
TRIM47-203ENST00000586495 PSMD6Q15008 389 aa18.19■□□□□ 0.5
TRIM47-203ENST00000586495 MAPRE1Q15691 268 aaKnown RBP18.19■□□□□ 0.5
TRIM47-203ENST00000586495 CFAP221Q4G0U5 840 aa18.19■□□□□ 0.5
TRIM47-203ENST00000586495 RIF1Q5UIP0 2472 aaKnown RBP18.19■□□□□ 0.5
TRIM47-203ENST00000586495 SCARA3Q6AZY7 606 aa18.19■□□□□ 0.5
TRIM47-203ENST00000586495 C4orf50Q6ZRC1 276 aa18.19■□□□□ 0.5
TRIM47-203ENST00000586495 TRAPPC11Q7Z392 1133 aa18.19■□□□□ 0.5
TRIM47-203ENST00000586495 OSTM1Q86WC4 334 aa18.19■□□□□ 0.5
TRIM47-203ENST00000586495 CMTM8Q8IZV2 173 aa18.19■□□□□ 0.5
TRIM47-203ENST00000586495 ATRIPQ8WXE1 791 aa18.19■□□□□ 0.5
TRIM47-203ENST00000586495 MRPS31Q92665 395 aaKnown RBP18.19■□□□□ 0.5
TRIM47-203ENST00000586495 PKMYT1Q99640 499 aa18.19■□□□□ 0.5
TRIM47-203ENST00000586495 CGRRF1Q99675 332 aa18.19■□□□□ 0.5
TRIM47-203ENST00000586495 SLC46A2Q9BY10 475 aa18.19■□□□□ 0.5
TRIM47-203ENST00000586495 CHRDQ9H2X0 955 aa18.19■□□□□ 0.5
TRIM47-203ENST00000586495 CDH9Q9ULB4 789 aa18.19■□□□□ 0.5
TRIM47-203ENST00000586495 PCDHGA2Q9Y5H1 932 aa18.19■□□□□ 0.5
TRIM47-203ENST00000586495 PTPRJQ12913 1337 aa18.19■□□□□ 0.5
TRIM47-203ENST00000586495 TICRRQ7Z2Z1 1910 aa18.18■□□□□ 0.5
TRIM47-203ENST00000586495 PRAMEF12O95522 483 aa18.18■□□□□ 0.5
TRIM47-203ENST00000586495 SLFN14P0C7P3 912 aa18.18■□□□□ 0.5
TRIM47-203ENST00000586495 CYP2F1P24903 491 aa18.18■□□□□ 0.5
TRIM47-203ENST00000586495 GPR15P49685 360 aa18.18■□□□□ 0.5
TRIM47-203ENST00000586495 NLRP12P59046 1061 aa18.18■□□□□ 0.5
TRIM47-203ENST00000586495 CYP24A1Q07973 514 aa18.18■□□□□ 0.5
TRIM47-203ENST00000586495 CUL4BQ13620 913 aa18.18■□□□□ 0.5
TRIM47-203ENST00000586495 DDR2Q16832 855 aa18.18■□□□□ 0.5
TRIM47-203ENST00000586495 KNOP1Q1ED39 458 aaKnown RBP18.18■□□□□ 0.5
TRIM47-203ENST00000586495 BMT2Q1RMZ1 405 aa18.18■□□□□ 0.5
TRIM47-203ENST00000586495 MAMSTRQ6ZN01 415 aa18.18■□□□□ 0.5
TRIM47-203ENST00000586495 LIMS2Q7Z4I7 341 aa18.18■□□□□ 0.5
TRIM47-203ENST00000586495 RALGPS2Q86X27 583 aaPredicted RBP18.18■□□□□ 0.5
TRIM47-203ENST00000586495 C12orf56Q8IXR9 622 aa18.18■□□□□ 0.5
TRIM47-203ENST00000586495 ZNF687Q8N1G0 1237 aa18.18■□□□□ 0.5
TRIM47-203ENST00000586495 LRRC3BQ96PB8 259 aa18.18■□□□□ 0.5
TRIM47-203ENST00000586495 MMS19Q96T76 1030 aa18.18■□□□□ 0.5
TRIM47-203ENST00000586495 SYT15Q9BQS2 421 aa18.18■□□□□ 0.5
TRIM47-203ENST00000586495 FAM126AQ9BYI3 521 aaPredicted RBP18.18■□□□□ 0.5
TRIM47-203ENST00000586495 KIF9Q9HAQ2 790 aa18.18■□□□□ 0.5
TRIM47-203ENST00000586495 ZSCAN32Q9NX65 697 aa18.18■□□□□ 0.5
TRIM47-203ENST00000586495 SERTAD1Q9UHV2 236 aa18.18■□□□□ 0.5
TRIM47-203ENST00000586495 NUP210Q8TEM1 1887 aaPredicted RBP18.18■□□□□ 0.5
TRIM47-203ENST00000586495 MYBPHLA2RUH7 354 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms