RNA–Protein interactions for RNA: ENST00000585932.5

PTBP1-207, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-207ENST00000585932 GRM2Q14416 872 aa22.34■■□□□ 1.17
PTBP1-207ENST00000585932 FAM171BQ6P995 826 aa22.34■■□□□ 1.17
PTBP1-207ENST00000585932 VITQ6UXI7 678 aa22.34■■□□□ 1.17
PTBP1-207ENST00000585932 GPIHBP1Q8IV16 184 aa22.34■■□□□ 1.17
PTBP1-207ENST00000585932 ZSCAN18Q8TBC5 510 aaPredicted RBP22.34■■□□□ 1.17
PTBP1-207ENST00000585932 SPATA18Q8TC71 538 aa22.34■■□□□ 1.17
PTBP1-207ENST00000585932 ERCC4Q92889 916 aaPredicted RBP22.34■■□□□ 1.17
PTBP1-207ENST00000585932 SMARCD2Q92925 531 aa22.34■■□□□ 1.17
PTBP1-207ENST00000585932 LRRC3BQ96PB8 259 aa22.34■■□□□ 1.17
PTBP1-207ENST00000585932 C4BPAP04003 597 aaKnown RBP22.33■■□□□ 1.17
PTBP1-207ENST00000585932 WARSP23381 471 aaKnown RBP22.33■■□□□ 1.17
PTBP1-207ENST00000585932 GABRR2P28476 465 aa22.33■■□□□ 1.17
PTBP1-207ENST00000585932 LHX1P48742 406 aa22.33■■□□□ 1.17
PTBP1-207ENST00000585932 MYL7Q01449 175 aa22.33■■□□□ 1.17
PTBP1-207ENST00000585932 SMARCB1Q12824 385 aa22.33■■□□□ 1.17
PTBP1-207ENST00000585932 ZCWPW2Q504Y3 356 aa22.33■■□□□ 1.17
PTBP1-207ENST00000585932 DPH6Q7L8W6 267 aa22.33■■□□□ 1.17
PTBP1-207ENST00000585932 FOXQ1Q9C009 403 aa22.33■■□□□ 1.17
PTBP1-207ENST00000585932 TRPV4Q9HBA0 871 aa22.33■■□□□ 1.17
PTBP1-207ENST00000585932 GALR2O43603 387 aaPredicted RBP22.32■■□□□ 1.16
PTBP1-207ENST00000585932 AKAP3O75969 853 aa22.32■■□□□ 1.16
PTBP1-207ENST00000585932 CYP4F8P98187 520 aa22.32■■□□□ 1.16
PTBP1-207ENST00000585932 NFE2Q16621 373 aaPredicted RBP22.32■■□□□ 1.16
PTBP1-207ENST00000585932 DDR2Q16832 855 aa22.32■■□□□ 1.16
PTBP1-207ENST00000585932 WDR72Q3MJ13 1102 aa22.32■■□□□ 1.16
PTBP1-207ENST00000585932 ITIH5Q86UX2 942 aa22.32■■□□□ 1.16
PTBP1-207ENST00000585932 GUF1Q8N442 669 aaKnown RBP22.32■■□□□ 1.16
PTBP1-207ENST00000585932 FAM200AQ8TCP9 573 aa22.32■■□□□ 1.16
PTBP1-207ENST00000585932 SYT15Q9BQS2 421 aa22.32■■□□□ 1.16
PTBP1-207ENST00000585932 ZFP14Q9HCL3 533 aa22.32■■□□□ 1.16
PTBP1-207ENST00000585932 OBSL1O75147 1896 aa22.31■■□□□ 1.16
PTBP1-207ENST00000585932 LRRN2O75325 713 aa22.31■■□□□ 1.16
PTBP1-207ENST00000585932 STAU1O95793 577 aaKnown RBP22.31■■□□□ 1.16
PTBP1-207ENST00000585932 PDGFRBP09619 1106 aa22.31■■□□□ 1.16
PTBP1-207ENST00000585932 GLULP15104 373 aa22.31■■□□□ 1.16
PTBP1-207ENST00000585932 STARD6P59095 220 aa22.31■■□□□ 1.16
PTBP1-207ENST00000585932 NFIL3Q16649 462 aa22.31■■□□□ 1.16
PTBP1-207ENST00000585932 SLC44A4Q53GD3 710 aa22.31■■□□□ 1.16
PTBP1-207ENST00000585932 CEP135Q66GS9 1140 aa22.31■■□□□ 1.16
PTBP1-207ENST00000585932 MYLPFQ96A32 169 aa22.31■■□□□ 1.16
PTBP1-207ENST00000585932 MMS19Q96T76 1030 aa22.31■■□□□ 1.16
PTBP1-207ENST00000585932 DDX23Q9BUQ8 820 aaKnown RBP22.31■■□□□ 1.16
PTBP1-207ENST00000585932 SDCBP2Q9H190 292 aa22.31■■□□□ 1.16
PTBP1-207ENST00000585932 ATXN3LQ9H3M9 355 aa22.31■■□□□ 1.16
PTBP1-207ENST00000585932 DPEP3Q9H4B8 488 aa22.31■■□□□ 1.16
PTBP1-207ENST00000585932 ABCB6Q9NP58 842 aa22.31■■□□□ 1.16
PTBP1-207ENST00000585932 DLGAP2Q9P1A6 1054 aa22.31■■□□□ 1.16
PTBP1-207ENST00000585932 MTF2Q9Y483 593 aaPredicted RBP22.31■■□□□ 1.16
PTBP1-207ENST00000585932 PTPRDP23468 1912 aa22.31■■□□□ 1.16
PTBP1-207ENST00000585932 TACC1O75410 805 aa22.3■■□□□ 1.16
PTBP1-207ENST00000585932 CD72P21854 359 aa22.3■■□□□ 1.16
PTBP1-207ENST00000585932 PCSK1P29120 753 aa22.3■■□□□ 1.16
PTBP1-207ENST00000585932 FAM160A1Q05DH4 1040 aa22.3■■□□□ 1.16
PTBP1-207ENST00000585932 CFAP221Q4G0U5 840 aa22.3■■□□□ 1.16
PTBP1-207ENST00000585932 PHLDB3Q6NSJ2 640 aa22.3■■□□□ 1.16
PTBP1-207ENST00000585932 ARID3BQ8IVW6 561 aaPredicted RBP22.3■■□□□ 1.16
PTBP1-207ENST00000585932 SPATA20Q8TB22 786 aa22.3■■□□□ 1.16
PTBP1-207ENST00000585932 TMC2Q8TDI7 906 aa22.3■■□□□ 1.16
PTBP1-207ENST00000585932 SLITRK6Q9H5Y7 841 aa22.3■■□□□ 1.16
PTBP1-207ENST00000585932 SMYD3Q9H7B4 428 aa22.3■■□□□ 1.16
PTBP1-207ENST00000585932 TMEM30AQ9NV96 361 aa22.3■■□□□ 1.16
PTBP1-207ENST00000585932 FAM86C1Q9NVL1 165 aa22.3■■□□□ 1.16
PTBP1-207ENST00000585932 NXF1Q9UBU9 619 aaKnown RBP22.3■■□□□ 1.16
PTBP1-207ENST00000585932 CDH9Q9ULB4 789 aa22.3■■□□□ 1.16
PTBP1-207ENST00000585932 R3HCC1Q9Y3T6 440 aaKnown RBP22.3■■□□□ 1.16
PTBP1-207ENST00000585932 USP34Q70CQ2 3546 aa22.3■■□□□ 1.16
PTBP1-207ENST00000585932 VPS13AQ96RL7 3174 aa22.3■■□□□ 1.16
PTBP1-207ENST00000585932 DENND4CQ5VZ89 1909 aa22.29■■□□□ 1.16
PTBP1-207ENST00000585932 NUP210Q8TEM1 1887 aaPredicted RBP22.29■■□□□ 1.16
PTBP1-207ENST00000585932 HEPACAM2A8MVW5 462 aa22.29■■□□□ 1.16
PTBP1-207ENST00000585932 H0Y858 1186 aa22.29■■□□□ 1.16
PTBP1-207ENST00000585932 ARNTLO00327 626 aa22.29■■□□□ 1.16
PTBP1-207ENST00000585932 CALUO43852 315 aaPredicted RBP22.29■■□□□ 1.16
PTBP1-207ENST00000585932 GADD45BO75293 160 aaPredicted RBP22.29■■□□□ 1.16
PTBP1-207ENST00000585932 TADA3O75528 432 aa22.29■■□□□ 1.16
PTBP1-207ENST00000585932 PRAMEF12O95522 483 aa22.29■■□□□ 1.16
PTBP1-207ENST00000585932 F11P03951 625 aa22.29■■□□□ 1.16
PTBP1-207ENST00000585932 NR2F2P24468 414 aa22.29■■□□□ 1.16
PTBP1-207ENST00000585932 RAP1GAPP47736 663 aa22.29■■□□□ 1.16
PTBP1-207ENST00000585932 PTPN5P54829 565 aa22.29■■□□□ 1.16
PTBP1-207ENST00000585932 CDH8P55286 799 aa22.29■■□□□ 1.16
PTBP1-207ENST00000585932 NLRP12P59046 1061 aa22.29■■□□□ 1.16
PTBP1-207ENST00000585932 BIRC3Q13489 604 aa22.29■■□□□ 1.16
PTBP1-207ENST00000585932 TRPC3Q13507 836 aa22.29■■□□□ 1.16
PTBP1-207ENST00000585932 VEPH1Q14D04 833 aa22.29■■□□□ 1.16
PTBP1-207ENST00000585932 MLF2Q15773 248 aaPredicted RBP22.29■■□□□ 1.16
PTBP1-207ENST00000585932 ZACNQ401N2 412 aa22.29■■□□□ 1.16
PTBP1-207ENST00000585932 GPR158Q5T848 1215 aa22.29■■□□□ 1.16
PTBP1-207ENST00000585932 CCDC105Q8IYK2 499 aa22.29■■□□□ 1.16
PTBP1-207ENST00000585932 EEF2KMTQ96G04 330 aa22.29■■□□□ 1.16
PTBP1-207ENST00000585932 SLC46A2Q9BY10 475 aa22.29■■□□□ 1.16
PTBP1-207ENST00000585932 SMG9Q9H0W8 520 aaKnown RBP22.29■■□□□ 1.16
PTBP1-207ENST00000585932 VRTNQ9H8Y1 702 aa22.29■■□□□ 1.16
PTBP1-207ENST00000585932 HEBP1Q9NRV9 189 aa22.29■■□□□ 1.16
PTBP1-207ENST00000585932 DCNP07585 359 aaKnown RBP22.28■■□□□ 1.16
PTBP1-207ENST00000585932 TRIM49P0CI25 452 aa22.28■■□□□ 1.16
PTBP1-207ENST00000585932 TRIM49CP0CI26 452 aa22.28■■□□□ 1.16
PTBP1-207ENST00000585932 ATICP31939 592 aa22.28■■□□□ 1.16
PTBP1-207ENST00000585932 GNL1P36915 607 aaPredicted RBP22.28■■□□□ 1.16
PTBP1-207ENST00000585932 NCOA4Q13772 614 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms