RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 PIAS1O75925 651 aa13.11□□□□□ -0.31
SMARCA4-208ENST00000585799 MICAL2O94851 1124 aa13.11□□□□□ -0.31
SMARCA4-208ENST00000585799 PGK1P00558 417 aa13.11□□□□□ -0.31
SMARCA4-208ENST00000585799 HSPA9P38646 679 aaKnown RBP13.11□□□□□ -0.31
SMARCA4-208ENST00000585799 ARPP19P56211 112 aa13.11□□□□□ -0.31
SMARCA4-208ENST00000585799 ARHGAP1Q07960 439 aa13.11□□□□□ -0.31
SMARCA4-208ENST00000585799 LRRC31Q6UY01 552 aa13.11□□□□□ -0.31
SMARCA4-208ENST00000585799 SCUBE3Q8IX30 993 aa13.11□□□□□ -0.31
SMARCA4-208ENST00000585799 BBOF1Q8ND07 529 aa13.11□□□□□ -0.31
SMARCA4-208ENST00000585799 PYROXD1Q8WU10 500 aa13.11□□□□□ -0.31
SMARCA4-208ENST00000585799 C18orf25Q96B23 403 aaPredicted RBP13.11□□□□□ -0.31
SMARCA4-208ENST00000585799 NMRK2Q9NPI5 230 aa13.11□□□□□ -0.31
SMARCA4-208ENST00000585799 DNPEPQ9ULA0 475 aa13.11□□□□□ -0.31
SMARCA4-208ENST00000585799 CREB3O43889 395 aa13.1□□□□□ -0.31
SMARCA4-208ENST00000585799 CNMDO75829 334 aa13.1□□□□□ -0.31
SMARCA4-208ENST00000585799 RECQL4O94761 1208 aa13.1□□□□□ -0.31
SMARCA4-208ENST00000585799 RBP3P10745 1247 aa13.1□□□□□ -0.31
SMARCA4-208ENST00000585799 ZNF844Q08AG5 666 aa13.1□□□□□ -0.31
SMARCA4-208ENST00000585799 C15orf59Q2T9L4 293 aaPredicted RBP13.1□□□□□ -0.31
SMARCA4-208ENST00000585799 HHATQ5VTY9 493 aa13.1□□□□□ -0.31
SMARCA4-208ENST00000585799 DPY19L2P1Q6NXN4 242 aa13.1□□□□□ -0.31
SMARCA4-208ENST00000585799 CXCL17Q6UXB2 119 aa13.1□□□□□ -0.31
SMARCA4-208ENST00000585799 HASPINQ8TF76 798 aa13.1□□□□□ -0.31
SMARCA4-208ENST00000585799 GTF3C2Q8WUA4 911 aaPredicted RBP13.1□□□□□ -0.31
SMARCA4-208ENST00000585799 RXFP2Q8WXD0 754 aa13.1□□□□□ -0.31
SMARCA4-208ENST00000585799 P3H4Q92791 437 aa13.1□□□□□ -0.31
SMARCA4-208ENST00000585799 NSRP1Q9H0G5 558 aaKnown RBP13.1□□□□□ -0.31
SMARCA4-208ENST00000585799 CES2O00748 559 aa13.1□□□□□ -0.31
SMARCA4-208ENST00000585799 SPAG7O75391 227 aa13.1□□□□□ -0.31
SMARCA4-208ENST00000585799 ATG7O95352 703 aa13.1□□□□□ -0.31
SMARCA4-208ENST00000585799 MCF2P10911 925 aa13.1□□□□□ -0.31
SMARCA4-208ENST00000585799 TCF4P15884 667 aa13.1□□□□□ -0.31
SMARCA4-208ENST00000585799 CA8P35219 290 aa13.1□□□□□ -0.31
SMARCA4-208ENST00000585799 BCAR1P56945 870 aa13.1□□□□□ -0.31
SMARCA4-208ENST00000585799 CCL14Q16627 93 aa13.1□□□□□ -0.31
SMARCA4-208ENST00000585799 C6orf118Q5T5N4 469 aa13.1□□□□□ -0.31
SMARCA4-208ENST00000585799 FAM71DQ8N9W8 422 aa13.1□□□□□ -0.31
SMARCA4-208ENST00000585799 ACTL9Q8TC94 416 aa13.1□□□□□ -0.31
SMARCA4-208ENST00000585799 CFAP36Q96G28 342 aa13.1□□□□□ -0.31
SMARCA4-208ENST00000585799 FERMT1Q9BQL6 677 aa13.1□□□□□ -0.31
SMARCA4-208ENST00000585799 NXF3Q9H4D5 531 aaKnown RBP13.1□□□□□ -0.31
SMARCA4-208ENST00000585799 AVENQ9NQS1 362 aaPredicted RBP13.1□□□□□ -0.31
SMARCA4-208ENST00000585799 KCNH4Q9UQ05 1017 aa13.1□□□□□ -0.31
SMARCA4-208ENST00000585799 RRN3P2A6NIE6 340 aa13.1□□□□□ -0.31
SMARCA4-208ENST00000585799 ATP5DP30049 168 aa13.1□□□□□ -0.31
SMARCA4-208ENST00000585799 OTUD4Q01804 1114 aaKnown RBP13.1□□□□□ -0.31
SMARCA4-208ENST00000585799 GHRHRQ02643 423 aa13.1□□□□□ -0.31
SMARCA4-208ENST00000585799 MBTD1Q05BQ5 628 aa13.1□□□□□ -0.31
SMARCA4-208ENST00000585799 ADCY2Q08462 1091 aa13.1□□□□□ -0.31
SMARCA4-208ENST00000585799 CACNA2D3Q8IZS8 1091 aa13.1□□□□□ -0.31
SMARCA4-208ENST00000585799 RAPGEF5Q92565 580 aa13.1□□□□□ -0.31
SMARCA4-208ENST00000585799 DCLK3Q9C098 648 aa13.1□□□□□ -0.31
SMARCA4-208ENST00000585799 PABPC3Q9H361 631 aaKnown RBP13.1□□□□□ -0.31
SMARCA4-208ENST00000585799 CDC42EP4Q9H3Q1 356 aaKnown RBP13.1□□□□□ -0.31
SMARCA4-208ENST00000585799 PDLIM7Q9NR12 457 aa13.1□□□□□ -0.31
SMARCA4-208ENST00000585799 HMGXB4Q9UGU5 601 aa13.1□□□□□ -0.31
SMARCA4-208ENST00000585799 MROH7Q68CQ1 1323 aa13.1□□□□□ -0.31
SMARCA4-208ENST00000585799 E5RJQ4 531 aa13.09□□□□□ -0.31
SMARCA4-208ENST00000585799 RPS6KA5O75582 802 aa13.09□□□□□ -0.31
SMARCA4-208ENST00000585799 C22orf31O95567 290 aa13.09□□□□□ -0.31
SMARCA4-208ENST00000585799 LSP1P33241 339 aa13.09□□□□□ -0.31
SMARCA4-208ENST00000585799 MDH1P40925 334 aaKnown RBP13.09□□□□□ -0.31
SMARCA4-208ENST00000585799 AARSP49588 968 aaKnown RBP eCLIP13.09□□□□□ -0.313e-6■□□□□ 9.5
SMARCA4-208ENST00000585799 CENPCQ03188 943 aa13.09□□□□□ -0.31
SMARCA4-208ENST00000585799 MCL1Q07820 350 aa13.09□□□□□ -0.31
SMARCA4-208ENST00000585799 TARBP2Q15633 366 aaKnown RBP13.09□□□□□ -0.31
SMARCA4-208ENST00000585799 PTPN20Q4JDL3 420 aa13.09□□□□□ -0.31
SMARCA4-208ENST00000585799 SPOCD1Q6ZMY3 1216 aa13.09□□□□□ -0.31
SMARCA4-208ENST00000585799 FAM47EQ6ZV65 393 aa13.09□□□□□ -0.31
SMARCA4-208ENST00000585799 RASGEF1CQ8N431 466 aa13.09□□□□□ -0.31
SMARCA4-208ENST00000585799 ANKS4BQ8N8V4 417 aa13.09□□□□□ -0.31
SMARCA4-208ENST00000585799 SPATA18Q8TC71 538 aa13.09□□□□□ -0.31
SMARCA4-208ENST00000585799 FAF2Q96CS3 445 aa13.09□□□□□ -0.31
SMARCA4-208ENST00000585799 MAML3Q96JK9 1138 aa13.09□□□□□ -0.31
SMARCA4-208ENST00000585799 SGIP1Q9BQI5 828 aa13.09□□□□□ -0.31
SMARCA4-208ENST00000585799 LPIN3Q9BQK8 851 aa13.09□□□□□ -0.31
SMARCA4-208ENST00000585799 GNL1P36915 607 aaPredicted RBP13.09□□□□□ -0.31
SMARCA4-208ENST00000585799 FNTAP49354 379 aa13.09□□□□□ -0.31
SMARCA4-208ENST00000585799 MFSD10Q14728 455 aa13.09□□□□□ -0.31
SMARCA4-208ENST00000585799 ELAC2Q9BQ52 826 aaKnown RBP13.09□□□□□ -0.31
SMARCA4-208ENST00000585799 GGT7Q9UJ14 662 aa13.09□□□□□ -0.31
SMARCA4-208ENST00000585799 NEU2Q9Y3R4 380 aa13.09□□□□□ -0.31
SMARCA4-208ENST00000585799 GOLGA8RI6L899 631 aa13.09□□□□□ -0.31
SMARCA4-208ENST00000585799 SMIM10L2AP0DMW4 78 aa13.09□□□□□ -0.31
SMARCA4-208ENST00000585799 SMIM10L2BP0DMW5 78 aa13.09□□□□□ -0.31
SMARCA4-208ENST00000585799 GNAT1P11488 350 aa13.09□□□□□ -0.31
SMARCA4-208ENST00000585799 BRAFP15056 766 aa13.09□□□□□ -0.31
SMARCA4-208ENST00000585799 IFI35P80217 286 aaPredicted RBP13.09□□□□□ -0.31
SMARCA4-208ENST00000585799 NETO2Q8NC67 525 aa13.09□□□□□ -0.31
SMARCA4-208ENST00000585799 APPL2Q8NEU8 664 aa13.09□□□□□ -0.31
SMARCA4-208ENST00000585799 PPP1R14CQ8TAE6 165 aa13.09□□□□□ -0.31
SMARCA4-208ENST00000585799 TRAIPQ9BWF2 469 aa13.09□□□□□ -0.31
SMARCA4-208ENST00000585799 EIF2AQ9BY44 585 aaKnown RBP13.09□□□□□ -0.31
SMARCA4-208ENST00000585799 RASA4BC9J798 803 aa13.08□□□□□ -0.32
SMARCA4-208ENST00000585799 TRIM66O15016 1216 aa13.08□□□□□ -0.32
SMARCA4-208ENST00000585799 EIF3HO15372 352 aaKnown RBP eCLIP13.08□□□□□ -0.32
SMARCA4-208ENST00000585799 RASA4O43374 803 aa13.08□□□□□ -0.32
SMARCA4-208ENST00000585799 HOXC6P09630 235 aa13.08□□□□□ -0.32
SMARCA4-208ENST00000585799 GKAP1Q5VSY0 366 aaPredicted RBP13.08□□□□□ -0.32
SMARCA4-208ENST00000585799 CENPUQ71F23 418 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms