RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 CRTAC1Q9NQ79 661 aa17.15■□□□□ 0.34
SS18-226ENST00000585241 KCND1Q9NSA2 647 aa17.15■□□□□ 0.34
SS18-226ENST00000585241 SPTLC3Q9NUV7 552 aa17.15■□□□□ 0.34
SS18-226ENST00000585241 REXO2Q9Y3B8 237 aaKnown RBP17.15■□□□□ 0.34
SS18-226ENST00000585241 PCDHA11Q9Y5I1 949 aa17.15■□□□□ 0.34
SS18-226ENST00000585241 LINC01553A4QN01 128 aa17.14■□□□□ 0.33
SS18-226ENST00000585241 OR6C75A6NL08 312 aa17.14■□□□□ 0.33
SS18-226ENST00000585241 CAPN15O75808 1086 aa17.14■□□□□ 0.33
SS18-226ENST00000585241 CFHP08603 1231 aa17.14■□□□□ 0.33
SS18-226ENST00000585241 UNGP13051 313 aaPredicted RBP17.14■□□□□ 0.33
SS18-226ENST00000585241 PTPN1P18031 435 aaKnown RBP17.14■□□□□ 0.33
SS18-226ENST00000585241 ACAT1P24752 427 aaKnown RBP17.14■□□□□ 0.33
SS18-226ENST00000585241 NOMO3P69849 1222 aa17.14■□□□□ 0.33
SS18-226ENST00000585241 CLEC16AQ2KHT3 1053 aa17.14■□□□□ 0.33
SS18-226ENST00000585241 USP41Q3LFD5 358 aa17.14■□□□□ 0.33
SS18-226ENST00000585241 PKDCCQ504Y2 493 aa17.14■□□□□ 0.33
SS18-226ENST00000585241 C10orf76Q5T2E6 689 aa17.14■□□□□ 0.33
SS18-226ENST00000585241 PPP1R26Q5T8A7 1209 aaPredicted RBP17.14■□□□□ 0.33
SS18-226ENST00000585241 FAM109BQ6ICB4 259 aaPredicted RBP17.14■□□□□ 0.33
SS18-226ENST00000585241 ZNF280DQ6N043 979 aa17.14■□□□□ 0.33
SS18-226ENST00000585241 ALKBH5Q6P6C2 394 aaKnown RBP17.14■□□□□ 0.33
SS18-226ENST00000585241 ANKS3Q6ZW76 656 aa17.14■□□□□ 0.33
SS18-226ENST00000585241 C12orf29Q8N999 325 aa17.14■□□□□ 0.33
SS18-226ENST00000585241 KIAA1524Q8TCG1 905 aa17.14■□□□□ 0.33
SS18-226ENST00000585241 PIK3R5Q8WYR1 880 aa17.14■□□□□ 0.33
SS18-226ENST00000585241 HNRNPABQ99729 332 aaKnown RBP17.14■□□□□ 0.33
SS18-226ENST00000585241 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.14■□□□□ 0.33
SS18-226ENST00000585241 PLVAPQ9BX97 442 aa17.14■□□□□ 0.33
SS18-226ENST00000585241 PUF60Q9UHX1 559 aaKnown RBP17.14■□□□□ 0.33
SS18-226ENST00000585241 C5orf67F2Z3F1 127 aa17.13■□□□□ 0.33
SS18-226ENST00000585241 H7C4K7 107 aa17.13■□□□□ 0.33
SS18-226ENST00000585241 ATP2C2O75185 946 aa17.13■□□□□ 0.33
SS18-226ENST00000585241 MICAL2O94851 1124 aa17.13■□□□□ 0.33
SS18-226ENST00000585241 BMPR1AP36894 532 aa17.13■□□□□ 0.33
SS18-226ENST00000585241 RABGGTBP53611 331 aa17.13■□□□□ 0.33
SS18-226ENST00000585241 PSMC1P62191 440 aaKnown RBP17.13■□□□□ 0.33
SS18-226ENST00000585241 KRT83P78385 493 aa17.13■□□□□ 0.33
SS18-226ENST00000585241 DSG1Q02413 1049 aa17.13■□□□□ 0.33
SS18-226ENST00000585241 CENPCQ03188 943 aa17.13■□□□□ 0.33
SS18-226ENST00000585241 PPP1R2P3Q6NXS1 205 aa17.13■□□□□ 0.33
SS18-226ENST00000585241 ZNF662Q6ZS27 426 aa17.13■□□□□ 0.33
SS18-226ENST00000585241 TAS1R1Q7RTX1 841 aa17.13■□□□□ 0.33
SS18-226ENST00000585241 ACRBPQ8NEB7 543 aa17.13■□□□□ 0.33
SS18-226ENST00000585241 MYCBPAPQ8TBZ2 947 aa17.13■□□□□ 0.33
SS18-226ENST00000585241 CYFIP2Q96F07 1278 aa17.13■□□□□ 0.33
SS18-226ENST00000585241 DESI2Q9BSY9 194 aa17.13■□□□□ 0.33
SS18-226ENST00000585241 ZNF518BQ9C0D4 1074 aa17.13■□□□□ 0.33
SS18-226ENST00000585241 ZCWPW1Q9H0M4 648 aa17.13■□□□□ 0.33
SS18-226ENST00000585241 ISCUQ9H1K1 167 aa17.13■□□□□ 0.33
SS18-226ENST00000585241 TSPAN16Q9UKR8 245 aa17.13■□□□□ 0.33
SS18-226ENST00000585241 LZTS1Q9Y250 596 aa17.13■□□□□ 0.33
SS18-226ENST00000585241 BACE2Q9Y5Z0 518 aa17.13■□□□□ 0.33
SS18-226ENST00000585241 NLRC5Q86WI3 1866 aa17.12■□□□□ 0.33
SS18-226ENST00000585241 MYBPHLA2RUH7 354 aa17.12■□□□□ 0.33
SS18-226ENST00000585241 GRXCR1A8MXD5 290 aa17.12■□□□□ 0.33
SS18-226ENST00000585241 FGF18O76093 207 aa17.12■□□□□ 0.33
SS18-226ENST00000585241 IPO7O95373 1038 aaKnown RBP17.12■□□□□ 0.33
SS18-226ENST00000585241 CCDC175P0C221 793 aa17.12■□□□□ 0.33
SS18-226ENST00000585241 TSPY1Q01534 308 aa17.12■□□□□ 0.33
SS18-226ENST00000585241 SPA17Q15506 151 aa17.12■□□□□ 0.33
SS18-226ENST00000585241 MAPRE1Q15691 268 aaKnown RBP17.12■□□□□ 0.33
SS18-226ENST00000585241 PAQR9Q6ZVX9 377 aa17.12■□□□□ 0.33
SS18-226ENST00000585241 FUKQ8N0W3 1084 aa17.12■□□□□ 0.33
SS18-226ENST00000585241 SAMD11Q96NU1 681 aa17.12■□□□□ 0.33
SS18-226ENST00000585241 PRO3102Q9H379 93 aa17.12■□□□□ 0.33
SS18-226ENST00000585241 FAM49BQ9NUQ9 324 aa17.12■□□□□ 0.33
SS18-226ENST00000585241 TAS2R14Q9NYV8 317 aa17.12■□□□□ 0.33
SS18-226ENST00000585241 MTRRQ9UBK8 725 aa17.12■□□□□ 0.33
SS18-226ENST00000585241 INTUQ9ULD6 942 aa17.12■□□□□ 0.33
SS18-226ENST00000585241 GBF1Q92538 1859 aa17.12■□□□□ 0.33
SS18-226ENST00000585241 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.11■□□□□ 0.33
SS18-226ENST00000585241 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.11■□□□□ 0.33
SS18-226ENST00000585241 RTN2O75298 545 aa17.11■□□□□ 0.33
SS18-226ENST00000585241 ARHGEF15O94989 841 aa17.11■□□□□ 0.33
SS18-226ENST00000585241 RB1P06400 928 aa17.11■□□□□ 0.33
SS18-226ENST00000585241 SETSIPP0DME0 302 aa17.11■□□□□ 0.33
SS18-226ENST00000585241 CCDC130P13994 396 aa17.11■□□□□ 0.33
SS18-226ENST00000585241 GPD2P43304 727 aa17.11■□□□□ 0.33
SS18-226ENST00000585241 GLUD2P49448 558 aa17.11■□□□□ 0.33
SS18-226ENST00000585241 VAV2P52735 878 aa17.11■□□□□ 0.33
SS18-226ENST00000585241 CYP27A1Q02318 531 aa17.11■□□□□ 0.33
SS18-226ENST00000585241 KRT17Q04695 432 aa17.11■□□□□ 0.33
SS18-226ENST00000585241 CCDC142Q17RM4 750 aa17.11■□□□□ 0.33
SS18-226ENST00000585241 GOLGA7BQ2TAP0 167 aa17.11■□□□□ 0.33
SS18-226ENST00000585241 CTXN3Q4LDR2 81 aa17.11■□□□□ 0.33
SS18-226ENST00000585241 MDH1BQ5I0G3 518 aa17.11■□□□□ 0.33
SS18-226ENST00000585241 CCDC122Q5T0U0 273 aa17.11■□□□□ 0.33
SS18-226ENST00000585241 SLC8B1Q6J4K2 584 aa17.11■□□□□ 0.33
SS18-226ENST00000585241 ACAD10Q6JQN1 1059 aa17.11■□□□□ 0.33
SS18-226ENST00000585241 DENND1BQ6P3S1 775 aa17.11■□□□□ 0.33
SS18-226ENST00000585241 LRRTM3Q86VH5 581 aa17.11■□□□□ 0.33
SS18-226ENST00000585241 ZSCAN30Q86W11 494 aa17.11■□□□□ 0.33
SS18-226ENST00000585241 TTC30AQ86WT1 665 aa17.11■□□□□ 0.33
SS18-226ENST00000585241 CEP57Q86XR8 500 aa17.11■□□□□ 0.33
SS18-226ENST00000585241 PHF13Q86YI8 300 aaPredicted RBP17.11■□□□□ 0.33
SS18-226ENST00000585241 WDTC1Q8N5D0 677 aa17.11■□□□□ 0.33
SS18-226ENST00000585241 ANKRD52Q8NB46 1076 aa17.11■□□□□ 0.33
SS18-226ENST00000585241 KLHL23Q8NBE8 558 aa17.11■□□□□ 0.33
SS18-226ENST00000585241 TMEM35BQ8NCS4 154 aa17.11■□□□□ 0.33
SS18-226ENST00000585241 SLC2A14Q8TDB8 520 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms