RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 ATG13O75143 517 aa16.15■□□□□ 0.18
VAPA-209ENST00000585042 FNTBP49356 437 aa16.15■□□□□ 0.18
VAPA-209ENST00000585042 CYP4F8P98187 520 aa16.15■□□□□ 0.18
VAPA-209ENST00000585042 ZNF268Q14587 947 aaPredicted RBP16.15■□□□□ 0.18
VAPA-209ENST00000585042 PON2Q15165 354 aa16.15■□□□□ 0.18
VAPA-209ENST00000585042 WDR44Q5JSH3 913 aa16.15■□□□□ 0.18
VAPA-209ENST00000585042 DPH6Q7L8W6 267 aa16.15■□□□□ 0.18
VAPA-209ENST00000585042 TMEM150AQ86TG1 271 aa16.15■□□□□ 0.18
VAPA-209ENST00000585042 MON1AQ86VX9 555 aa16.15■□□□□ 0.18
VAPA-209ENST00000585042 WDR5BQ86VZ2 330 aa16.15■□□□□ 0.18
VAPA-209ENST00000585042 BRSK2Q8IWQ3 736 aa16.15■□□□□ 0.18
VAPA-209ENST00000585042 MRPS31Q92665 395 aaKnown RBP16.15■□□□□ 0.18
VAPA-209ENST00000585042 EXOC4Q96A65 974 aa16.15■□□□□ 0.18
VAPA-209ENST00000585042 TRMT2BQ96GJ1 504 aaKnown RBP16.15■□□□□ 0.18
VAPA-209ENST00000585042 ZFYVE19Q96K21 471 aa16.15■□□□□ 0.18
VAPA-209ENST00000585042 MYRFLQ96LU7 910 aa16.15■□□□□ 0.18
VAPA-209ENST00000585042 BACH2Q9BYV9 841 aa16.15■□□□□ 0.18
VAPA-209ENST00000585042 TMEM206Q9H813 350 aa16.15■□□□□ 0.18
VAPA-209ENST00000585042 PARD6AQ9NPB6 346 aa16.15■□□□□ 0.18
VAPA-209ENST00000585042 RBM12Q9NTZ6 932 aaKnown RBP16.15■□□□□ 0.18
VAPA-209ENST00000585042 AGAP1Q9UPQ3 857 aa16.15■□□□□ 0.18
VAPA-209ENST00000585042 TCHHQ07283 1943 aa16.15■□□□□ 0.18
VAPA-209ENST00000585042 FRMD3A2A2Y4 597 aa16.14■□□□□ 0.17
VAPA-209ENST00000585042 TRDMT1O14717 391 aaKnown RBP16.14■□□□□ 0.17
VAPA-209ENST00000585042 EXTL3O43909 919 aa16.14■□□□□ 0.17
VAPA-209ENST00000585042 PRPF40AO75400 957 aaKnown RBP16.14■□□□□ 0.17
VAPA-209ENST00000585042 GCNT3O95395 438 aa16.14■□□□□ 0.17
VAPA-209ENST00000585042 LHX1P48742 406 aa16.14■□□□□ 0.17
VAPA-209ENST00000585042 RBP5P82980 135 aa16.14■□□□□ 0.17
VAPA-209ENST00000585042 TFAMQ00059 246 aaKnown RBP16.14■□□□□ 0.17
VAPA-209ENST00000585042 MYL7Q01449 175 aa16.14■□□□□ 0.17
VAPA-209ENST00000585042 TNK2Q07912 1038 aa16.14■□□□□ 0.17
VAPA-209ENST00000585042 KCNA1Q09470 495 aa16.14■□□□□ 0.17
VAPA-209ENST00000585042 GRSF1Q12849 480 aaKnown RBP eCLIP16.14■□□□□ 0.17
VAPA-209ENST00000585042 RUNX3Q13761 415 aa16.14■□□□□ 0.17
VAPA-209ENST00000585042 CSRP2Q16527 193 aa16.14■□□□□ 0.17
VAPA-209ENST00000585042 TMEM196Q5HYL7 178 aa16.14■□□□□ 0.17
VAPA-209ENST00000585042 PRR23BQ6ZRT6 265 aa16.14■□□□□ 0.17
VAPA-209ENST00000585042 SYCP3Q8IZU3 236 aa16.14■□□□□ 0.17
VAPA-209ENST00000585042 PDCL2Q8N4E4 241 aa16.14■□□□□ 0.17
VAPA-209ENST00000585042 CSGALNACT2Q8N6G5 542 aa16.14■□□□□ 0.17
VAPA-209ENST00000585042 MAB21L3Q8N8X9 362 aa16.14■□□□□ 0.17
VAPA-209ENST00000585042 C1orf127Q8N9H9 656 aa16.14■□□□□ 0.17
VAPA-209ENST00000585042 NETO1Q8TDF5 533 aa16.14■□□□□ 0.17
VAPA-209ENST00000585042 DENND4CQ5VZ89 1909 aa16.13■□□□□ 0.17
VAPA-209ENST00000585042 ITGB3P05106 788 aa16.13■□□□□ 0.17
VAPA-209ENST00000585042 POLR2BP30876 1174 aaKnown RBP16.13■□□□□ 0.17
VAPA-209ENST00000585042 SPEM2Q0P670 501 aa16.13■□□□□ 0.17
VAPA-209ENST00000585042 BFSP1Q12934 665 aa16.13■□□□□ 0.17
VAPA-209ENST00000585042 SLC39A14Q15043 492 aa16.13■□□□□ 0.17
VAPA-209ENST00000585042 PDGFRLQ15198 375 aa16.13■□□□□ 0.17
VAPA-209ENST00000585042 SURF1Q15526 300 aa16.13■□□□□ 0.17
VAPA-209ENST00000585042 CFAP221Q4G0U5 840 aa16.13■□□□□ 0.17
VAPA-209ENST00000585042 CC2D1AQ6P1N0 951 aaPredicted RBP16.13■□□□□ 0.17
VAPA-209ENST00000585042 Q6ZS52 159 aa16.13■□□□□ 0.17
VAPA-209ENST00000585042 TOP6BLQ8N6T0 577 aa16.13■□□□□ 0.17
VAPA-209ENST00000585042 TTC8Q8TAM2 541 aa16.13■□□□□ 0.17
VAPA-209ENST00000585042 CXorf38Q8TB03 319 aa16.13■□□□□ 0.17
VAPA-209ENST00000585042 USP13Q92995 863 aaPredicted RBP16.13■□□□□ 0.17
VAPA-209ENST00000585042 FUBP3Q96I24 572 aaKnown RBP eCLIP16.13■□□□□ 0.17
VAPA-209ENST00000585042 LOXL4Q96JB6 756 aa16.13■□□□□ 0.17
VAPA-209ENST00000585042 CEP295NLQ96MC4 621 aa16.13■□□□□ 0.17
VAPA-209ENST00000585042 LRRC27Q9C0I9 530 aa16.13■□□□□ 0.17
VAPA-209ENST00000585042 IKZF4Q9H2S9 585 aa16.13■□□□□ 0.17
VAPA-209ENST00000585042 TMLHEQ9NVH6 421 aa16.13■□□□□ 0.17
VAPA-209ENST00000585042 DDX43Q9NXZ2 648 aaKnown RBP16.13■□□□□ 0.17
VAPA-209ENST00000585042 RBAKQ9NYW8 714 aaPredicted RBP16.13■□□□□ 0.17
VAPA-209ENST00000585042 L1RE1Q9UN81 338 aa16.13■□□□□ 0.17
VAPA-209ENST00000585042 GABRDO14764 452 aa16.12■□□□□ 0.17
VAPA-209ENST00000585042 NOL4O94818 638 aa16.12■□□□□ 0.17
VAPA-209ENST00000585042 PCSK1P29120 753 aa16.12■□□□□ 0.17
VAPA-209ENST00000585042 DMWDQ09019 674 aa16.12■□□□□ 0.17
VAPA-209ENST00000585042 RESTQ13127 1097 aa16.12■□□□□ 0.17
VAPA-209ENST00000585042 FBXO43Q4G163 708 aa16.12■□□□□ 0.17
VAPA-209ENST00000585042 INTS6LQ5JSJ4 861 aaKnown RBP16.12■□□□□ 0.17
VAPA-209ENST00000585042 STXBP4Q6ZWJ1 553 aa16.12■□□□□ 0.17
VAPA-209ENST00000585042 CAMKK1Q8N5S9 505 aa16.12■□□□□ 0.17
VAPA-209ENST00000585042 INTS4Q96HW7 963 aaKnown RBP16.12■□□□□ 0.17
VAPA-209ENST00000585042 CLIC6Q96NY7 704 aa16.12■□□□□ 0.17
VAPA-209ENST00000585042 PKMYT1Q99640 499 aa16.12■□□□□ 0.17
VAPA-209ENST00000585042 PI4K2AQ9BTU6 479 aa16.12■□□□□ 0.17
VAPA-209ENST00000585042 ZSCAN16Q9H4T2 348 aaPredicted RBP16.12■□□□□ 0.17
VAPA-209ENST00000585042 SEMA4GQ9NTN9 838 aa16.12■□□□□ 0.17
VAPA-209ENST00000585042 PANK4Q9NVE7 773 aa16.12■□□□□ 0.17
VAPA-209ENST00000585042 TBC1D7Q9P0N9 293 aa16.12■□□□□ 0.17
VAPA-209ENST00000585042 R3HCC1Q9Y3T6 440 aaKnown RBP16.12■□□□□ 0.17
VAPA-209ENST00000585042 KIF26AQ9ULI4 1882 aaPredicted RBP16.12■□□□□ 0.17
VAPA-209ENST00000585042 SLC30A4O14863 429 aa16.11■□□□□ 0.17
VAPA-209ENST00000585042 IDEP14735 1019 aa16.11■□□□□ 0.17
VAPA-209ENST00000585042 SYT1P21579 422 aa16.11■□□□□ 0.17
VAPA-209ENST00000585042 DRD1P21728 446 aa16.11■□□□□ 0.17
VAPA-209ENST00000585042 STAT6P42226 847 aa16.11■□□□□ 0.17
VAPA-209ENST00000585042 MAGEA11P43364 429 aa16.11■□□□□ 0.17
VAPA-209ENST00000585042 MYO1EQ12965 1108 aa16.11■□□□□ 0.17
VAPA-209ENST00000585042 LPAL2Q16609 132 aa16.11■□□□□ 0.17
VAPA-209ENST00000585042 TXNDC8Q6A555 127 aa16.11■□□□□ 0.17
VAPA-209ENST00000585042 CEP68Q76N32 757 aa16.11■□□□□ 0.17
VAPA-209ENST00000585042 LIMS2Q7Z4I7 341 aa16.11■□□□□ 0.17
VAPA-209ENST00000585042 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.11■□□□□ 0.17
VAPA-209ENST00000585042 CCDC65Q8IXS2 484 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms