RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 TDP1Q9NUW8 608 aa19.61■□□□□ 0.73
TOP3A-220ENST00000585031 UBQLN1Q9UMX0 589 aaKnown RBP19.61■□□□□ 0.73
TOP3A-220ENST00000585031 CEP192Q8TEP8 1941 aa19.61■□□□□ 0.73
TOP3A-220ENST00000585031 SPAARA0A1B0GVQ0 90 aa19.6■□□□□ 0.73
TOP3A-220ENST00000585031 FAM189A1O60320 539 aa19.6■□□□□ 0.73
TOP3A-220ENST00000585031 MAPTP10636 758 aaKnown RBP19.6■□□□□ 0.73
TOP3A-220ENST00000585031 HNRNPLP14866 589 aaKnown RBP eCLIP19.6■□□□□ 0.73
TOP3A-220ENST00000585031 GPR15P49685 360 aa19.6■□□□□ 0.73
TOP3A-220ENST00000585031 FXR2P51116 673 aaKnown RBP eCLIP19.6■□□□□ 0.73
TOP3A-220ENST00000585031 RAD51AP2Q09MP3 1159 aa19.6■□□□□ 0.73
TOP3A-220ENST00000585031 ENOX2Q16206 610 aaKnown RBP19.6■□□□□ 0.73
TOP3A-220ENST00000585031 FBXO43Q4G163 708 aa19.6■□□□□ 0.73
TOP3A-220ENST00000585031 ARMCX5Q6P1M9 558 aa19.6■□□□□ 0.73
TOP3A-220ENST00000585031 PIP4P1Q86T03 277 aa19.6■□□□□ 0.73
TOP3A-220ENST00000585031 ECT2Q9H8V3 914 aa19.6■□□□□ 0.73
TOP3A-220ENST00000585031 LRWD1Q9UFC0 647 aa19.6■□□□□ 0.73
TOP3A-220ENST00000585031 EVLQ9UI08 416 aaPredicted RBP19.6■□□□□ 0.73
TOP3A-220ENST00000585031 CLDN3O15551 220 aa19.59■□□□□ 0.73
TOP3A-220ENST00000585031 TADA3O75528 432 aa19.59■□□□□ 0.73
TOP3A-220ENST00000585031 CLTAP09496 248 aa19.59■□□□□ 0.73
TOP3A-220ENST00000585031 HAPLN1P10915 354 aaPredicted RBP19.59■□□□□ 0.73
TOP3A-220ENST00000585031 CDC25AP30304 524 aa19.59■□□□□ 0.73
TOP3A-220ENST00000585031 TUFMP49411 452 aaKnown RBP19.59■□□□□ 0.73
TOP3A-220ENST00000585031 HAUS3Q68CZ6 603 aa19.59■□□□□ 0.73
TOP3A-220ENST00000585031 PDZD3Q86UT5 571 aa19.59■□□□□ 0.73
TOP3A-220ENST00000585031 C11orf74Q86VG3 221 aa19.59■□□□□ 0.73
TOP3A-220ENST00000585031 FRMD1Q8N878 549 aa19.59■□□□□ 0.73
TOP3A-220ENST00000585031 SLC22A12Q96S37 553 aa19.59■□□□□ 0.73
TOP3A-220ENST00000585031 SLC32A1Q9H598 525 aa19.59■□□□□ 0.73
TOP3A-220ENST00000585031 TMEM74BQ9NUR3 256 aa19.59■□□□□ 0.73
TOP3A-220ENST00000585031 MYOFQ9NZM1 2061 aa19.59■□□□□ 0.73
TOP3A-220ENST00000585031 MYO18AQ92614 2054 aaKnown RBP19.58■□□□□ 0.73
TOP3A-220ENST00000585031 UPK3BL1B0FP48 263 aa19.58■□□□□ 0.72
TOP3A-220ENST00000585031 UPK3BL2E5RIL1 263 aa19.58■□□□□ 0.72
TOP3A-220ENST00000585031 CYP11A1P05108 521 aa19.58■□□□□ 0.72
TOP3A-220ENST00000585031 ADRB2P07550 413 aa19.58■□□□□ 0.72
TOP3A-220ENST00000585031 AVPR1AP37288 418 aa19.58■□□□□ 0.72
TOP3A-220ENST00000585031 FAM193AP78312 1265 aa19.58■□□□□ 0.72
TOP3A-220ENST00000585031 AMPD2Q01433 879 aa19.58■□□□□ 0.72
TOP3A-220ENST00000585031 PSMD2Q13200 908 aa19.58■□□□□ 0.72
TOP3A-220ENST00000585031 IL17AQ16552 155 aa19.58■□□□□ 0.72
TOP3A-220ENST00000585031 USP39Q53GS9 565 aaKnown RBP19.58■□□□□ 0.72
TOP3A-220ENST00000585031 SDHAF4Q5VUM1 108 aa19.58■□□□□ 0.72
TOP3A-220ENST00000585031 SPATA1Q5VX52 437 aa19.58■□□□□ 0.72
TOP3A-220ENST00000585031 ZPBP2Q6X784 338 aa19.58■□□□□ 0.72
TOP3A-220ENST00000585031 CYP2U1Q7Z449 544 aa19.58■□□□□ 0.72
TOP3A-220ENST00000585031 RASSF3Q86WH2 238 aa19.58■□□□□ 0.72
TOP3A-220ENST00000585031 IGSF22Q8N9C0 903 aa19.58■□□□□ 0.72
TOP3A-220ENST00000585031 SNX29Q8TEQ0 813 aa19.58■□□□□ 0.72
TOP3A-220ENST00000585031 PIGKQ92643 395 aa19.58■□□□□ 0.72
TOP3A-220ENST00000585031 CD101Q93033 1021 aa19.58■□□□□ 0.72
TOP3A-220ENST00000585031 DRC1Q96MC2 740 aa19.58■□□□□ 0.72
TOP3A-220ENST00000585031 CYP2S1Q96SQ9 504 aa19.58■□□□□ 0.72
TOP3A-220ENST00000585031 MMTAG2Q9BU76 263 aaKnown RBP19.58■□□□□ 0.72
TOP3A-220ENST00000585031 TMLHEQ9NVH6 421 aa19.58■□□□□ 0.72
TOP3A-220ENST00000585031 PLXNB3Q9ULL4 1909 aa19.58■□□□□ 0.72
TOP3A-220ENST00000585031 K7EQS6 105 aa19.57■□□□□ 0.72
TOP3A-220ENST00000585031 PIRO00625 290 aa19.57■□□□□ 0.72
TOP3A-220ENST00000585031 ODC1P11926 461 aa19.57■□□□□ 0.72
TOP3A-220ENST00000585031 DHPSP49366 369 aaPredicted RBP19.57■□□□□ 0.72
TOP3A-220ENST00000585031 BFSP1Q12934 665 aa19.57■□□□□ 0.72
TOP3A-220ENST00000585031 VEPH1Q14D04 833 aa19.57■□□□□ 0.72
TOP3A-220ENST00000585031 C9orf57Q5W0N0 161 aa19.57■□□□□ 0.72
TOP3A-220ENST00000585031 JADE1Q6IE81 842 aa19.57■□□□□ 0.72
TOP3A-220ENST00000585031 ANO7Q6IWH7 933 aa19.57■□□□□ 0.72
TOP3A-220ENST00000585031 C19orf48Q6RUI8 117 aa19.57■□□□□ 0.72
TOP3A-220ENST00000585031 MON1AQ86VX9 555 aa19.57■□□□□ 0.72
TOP3A-220ENST00000585031 SFTPA1Q8IWL2 248 aa19.57■□□□□ 0.72
TOP3A-220ENST00000585031 TSTD1Q8NFU3 115 aa19.57■□□□□ 0.72
TOP3A-220ENST00000585031 USP33Q8TEY7 942 aa19.57■□□□□ 0.72
TOP3A-220ENST00000585031 SPIRE2Q8WWL2 714 aa19.57■□□□□ 0.72
TOP3A-220ENST00000585031 GCNAQ96QF7 691 aa19.57■□□□□ 0.72
TOP3A-220ENST00000585031 LINC00597Q9H2U6 94 aa19.57■□□□□ 0.72
TOP3A-220ENST00000585031 FSCN3Q9NQT6 498 aa19.57■□□□□ 0.72
TOP3A-220ENST00000585031 DNM3Q9UQ16 869 aa19.57■□□□□ 0.72
TOP3A-220ENST00000585031 WNT6Q9Y6F9 365 aa19.57■□□□□ 0.72
TOP3A-220ENST00000585031 HELZP42694 1942 aaKnown RBP19.57■□□□□ 0.72
TOP3A-220ENST00000585031 PLXND1Q9Y4D7 1925 aa19.57■□□□□ 0.72
TOP3A-220ENST00000585031 H0Y626 953 aa19.56■□□□□ 0.72
TOP3A-220ENST00000585031 TRIM16O95361 564 aa19.56■□□□□ 0.72
TOP3A-220ENST00000585031 CHRM1P11229 460 aaPredicted RBP19.56■□□□□ 0.72
TOP3A-220ENST00000585031 MAPK8P45983 427 aa19.56■□□□□ 0.72
TOP3A-220ENST00000585031 SIM1P81133 766 aaPredicted RBP19.56■□□□□ 0.72
TOP3A-220ENST00000585031 PPP2R3AQ06190 1150 aa19.56■□□□□ 0.72
TOP3A-220ENST00000585031 LMAN2Q12907 356 aa19.56■□□□□ 0.72
TOP3A-220ENST00000585031 STRN3Q13033 797 aa19.56■□□□□ 0.72
TOP3A-220ENST00000585031 SEMA3BQ13214 749 aa19.56■□□□□ 0.72
TOP3A-220ENST00000585031 PDGFRLQ15198 375 aa19.56■□□□□ 0.72
TOP3A-220ENST00000585031 ZNF77Q15935 545 aa19.56■□□□□ 0.72
TOP3A-220ENST00000585031 EML3Q32P44 896 aa19.56■□□□□ 0.72
TOP3A-220ENST00000585031 TTC38Q5R3I4 469 aa19.56■□□□□ 0.72
TOP3A-220ENST00000585031 TMEM92Q6UXU6 159 aa19.56■□□□□ 0.72
TOP3A-220ENST00000585031 MDGA1Q8NFP4 955 aa19.56■□□□□ 0.72
TOP3A-220ENST00000585031 OLIG1Q8TAK6 271 aa19.56■□□□□ 0.72
TOP3A-220ENST00000585031 RLN3Q8WXF3 142 aa19.56■□□□□ 0.72
TOP3A-220ENST00000585031 FNBP1Q96RU3 617 aa19.56■□□□□ 0.72
TOP3A-220ENST00000585031 C17orf75Q9HAS0 396 aa19.56■□□□□ 0.72
TOP3A-220ENST00000585031 ZMYM5Q9UJ78 669 aa19.56■□□□□ 0.72
TOP3A-220ENST00000585031 ASXL3Q9C0F0 2248 aa19.55■□□□□ 0.72
TOP3A-220ENST00000585031 ANO9A1A5B4 782 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms