RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 DNAJB1P25685 340 aa19.47■□□□□ 0.71
RFFL-211ENST00000584541 ARPP19P56211 112 aa19.47■□□□□ 0.71
RFFL-211ENST00000584541 CCDC173Q0VFZ6 552 aa19.47■□□□□ 0.71
RFFL-211ENST00000584541 SMARCB1Q12824 385 aa19.47■□□□□ 0.71
RFFL-211ENST00000584541 ARID5BQ14865 1188 aa19.47■□□□□ 0.71
RFFL-211ENST00000584541 STILQ15468 1287 aa19.47■□□□□ 0.71
RFFL-211ENST00000584541 PTPROQ16827 1216 aa19.47■□□□□ 0.71
RFFL-211ENST00000584541 MDH1BQ5I0G3 518 aa19.47■□□□□ 0.71
RFFL-211ENST00000584541 SLC47A2Q86VL8 602 aa19.47■□□□□ 0.71
RFFL-211ENST00000584541 GDPD5Q8WTR4 605 aa19.47■□□□□ 0.71
RFFL-211ENST00000584541 GTF3C4Q9UKN8 822 aa19.47■□□□□ 0.71
RFFL-211ENST00000584541 IRAK3Q9Y616 596 aa19.47■□□□□ 0.71
RFFL-211ENST00000584541 BZW2Q9Y6E2 419 aaKnown RBP19.47■□□□□ 0.71
RFFL-211ENST00000584541 ATP8B3O60423 1300 aa19.47■□□□□ 0.71
RFFL-211ENST00000584541 FSCN2O14926 492 aa19.46■□□□□ 0.71
RFFL-211ENST00000584541 ATP2C2O75185 946 aa19.46■□□□□ 0.71
RFFL-211ENST00000584541 CYP11B1P15538 503 aa19.46■□□□□ 0.71
RFFL-211ENST00000584541 RPL17P18621 184 aaKnown RBP19.46■□□□□ 0.71
RFFL-211ENST00000584541 HNRNPH3P31942 346 aaKnown RBP19.46■□□□□ 0.71
RFFL-211ENST00000584541 OR1D2P34982 312 aa19.46■□□□□ 0.71
RFFL-211ENST00000584541 NDUFV1P49821 464 aa19.46■□□□□ 0.71
RFFL-211ENST00000584541 GOLGA8FQ08AF8 430 aa19.46■□□□□ 0.71
RFFL-211ENST00000584541 GOLGA8DPQ0D2H9 430 aa19.46■□□□□ 0.71
RFFL-211ENST00000584541 KLHL30Q0D2K2 578 aa19.46■□□□□ 0.71
RFFL-211ENST00000584541 NFE2Q16621 373 aaPredicted RBP19.46■□□□□ 0.71
RFFL-211ENST00000584541 SLC39A12Q504Y0 691 aa19.46■□□□□ 0.71
RFFL-211ENST00000584541 SLC8B1Q6J4K2 584 aa19.46■□□□□ 0.71
RFFL-211ENST00000584541 C4orf50Q6ZRC1 276 aa19.46■□□□□ 0.71
RFFL-211ENST00000584541 GPIHBP1Q8IV16 184 aa19.46■□□□□ 0.71
RFFL-211ENST00000584541 MRPL43Q8N983 215 aaKnown RBP19.46■□□□□ 0.71
RFFL-211ENST00000584541 TC2NQ8N9U0 490 aa19.46■□□□□ 0.71
RFFL-211ENST00000584541 MYCBPAPQ8TBZ2 947 aa19.46■□□□□ 0.71
RFFL-211ENST00000584541 PANX2Q96RD6 677 aa19.46■□□□□ 0.71
RFFL-211ENST00000584541 TMEM209Q96SK2 561 aa19.46■□□□□ 0.71
RFFL-211ENST00000584541 MED10Q9BTT4 135 aa19.46■□□□□ 0.71
RFFL-211ENST00000584541 PDCL3Q9H2J4 239 aa19.46■□□□□ 0.71
RFFL-211ENST00000584541 RXFP1Q9HBX9 757 aa19.46■□□□□ 0.71
RFFL-211ENST00000584541 CRTAC1Q9NQ79 661 aa19.46■□□□□ 0.71
RFFL-211ENST00000584541 ATG2AQ2TAZ0 1938 aa19.45■□□□□ 0.7
RFFL-211ENST00000584541 MYBPHLA2RUH7 354 aa19.45■□□□□ 0.7
RFFL-211ENST00000584541 LILRB3O75022 631 aa19.45■□□□□ 0.7
RFFL-211ENST00000584541 SERPING1P05155 500 aa19.45■□□□□ 0.7
RFFL-211ENST00000584541 PTMAP06454 111 aaKnown RBP19.45■□□□□ 0.7
RFFL-211ENST00000584541 ADH1AP07327 375 aa19.45■□□□□ 0.7
RFFL-211ENST00000584541 OR4Q2P0C623 313 aa19.45■□□□□ 0.7
RFFL-211ENST00000584541 BRD2P25440 801 aaKnown RBP19.45■□□□□ 0.7
RFFL-211ENST00000584541 PRKCIP41743 596 aa19.45■□□□□ 0.7
RFFL-211ENST00000584541 CYP27A1Q02318 531 aa19.45■□□□□ 0.7
RFFL-211ENST00000584541 GPR17Q13304 367 aa19.45■□□□□ 0.7
RFFL-211ENST00000584541 TDRD12Q587J7 1177 aaKnown RBP19.45■□□□□ 0.7
RFFL-211ENST00000584541 ARHGAP17Q68EM7 881 aa19.45■□□□□ 0.7
RFFL-211ENST00000584541 FAM171BQ6P995 826 aa19.45■□□□□ 0.7
RFFL-211ENST00000584541 IRF2BP2Q7Z5L9 587 aa19.45■□□□□ 0.7
RFFL-211ENST00000584541 ZNF677Q86XU0 584 aa19.45■□□□□ 0.7
RFFL-211ENST00000584541 SPATA2LQ8IUW3 424 aaPredicted RBP19.45■□□□□ 0.7
RFFL-211ENST00000584541 GLYCTKQ8IVS8 523 aa19.45■□□□□ 0.7
RFFL-211ENST00000584541 C12orf29Q8N999 325 aa19.45■□□□□ 0.7
RFFL-211ENST00000584541 CYFIP2Q96F07 1278 aa19.45■□□□□ 0.7
RFFL-211ENST00000584541 PDLIM2Q96JY6 352 aa19.45■□□□□ 0.7
RFFL-211ENST00000584541 CLSTN3Q9BQT9 956 aa19.45■□□□□ 0.7
RFFL-211ENST00000584541 FAM49BQ9NUQ9 324 aa19.45■□□□□ 0.7
RFFL-211ENST00000584541 PTPRDP23468 1912 aa19.45■□□□□ 0.7
RFFL-211ENST00000584541 C2orf71A6NGG8 1288 aa19.44■□□□□ 0.7
RFFL-211ENST00000584541 EPOPA6NHQ4 379 aa19.44■□□□□ 0.7
RFFL-211ENST00000584541 ROR1Q01973 937 aa19.44■□□□□ 0.7
RFFL-211ENST00000584541 CAMK1Q14012 370 aa19.44■□□□□ 0.7
RFFL-211ENST00000584541 CNGA2Q16280 664 aa19.44■□□□□ 0.7
RFFL-211ENST00000584541 ZNF697Q5TEC3 545 aa19.44■□□□□ 0.7
RFFL-211ENST00000584541 RSPO2Q6UXX9 243 aaPredicted RBP19.44■□□□□ 0.7
RFFL-211ENST00000584541 CCDC186Q7Z3E2 898 aa19.44■□□□□ 0.7
RFFL-211ENST00000584541 VPS36Q86VN1 386 aa19.44■□□□□ 0.7
RFFL-211ENST00000584541 EPS8L1Q8TE68 723 aa19.44■□□□□ 0.7
RFFL-211ENST00000584541 C2orf15Q8WU43 125 aaKnown RBP19.44■□□□□ 0.7
RFFL-211ENST00000584541 ZNF606Q8WXB4 792 aa19.44■□□□□ 0.7
RFFL-211ENST00000584541 MYLPFQ96A32 169 aa19.44■□□□□ 0.7
RFFL-211ENST00000584541 PCED1BQ96HM7 432 aa19.44■□□□□ 0.7
RFFL-211ENST00000584541 PKMYT1Q99640 499 aa19.44■□□□□ 0.7
RFFL-211ENST00000584541 ACP6Q9NPH0 428 aa19.44■□□□□ 0.7
RFFL-211ENST00000584541 HESX1Q9UBX0 185 aa19.44■□□□□ 0.7
RFFL-211ENST00000584541 PCDHB5Q9Y5E4 795 aa19.44■□□□□ 0.7
RFFL-211ENST00000584541 TEX28O15482 410 aa19.43■□□□□ 0.7
RFFL-211ENST00000584541 CALCAP01258 141 aa19.43■□□□□ 0.7
RFFL-211ENST00000584541 CNPP09543 421 aaKnown RBP19.43■□□□□ 0.7
RFFL-211ENST00000584541 SKILP12757 684 aa19.43■□□□□ 0.7
RFFL-211ENST00000584541 CCDC130P13994 396 aa19.43■□□□□ 0.7
RFFL-211ENST00000584541 KLRC2P26717 231 aa19.43■□□□□ 0.7
RFFL-211ENST00000584541 ADORA2BP29275 332 aa19.43■□□□□ 0.7
RFFL-211ENST00000584541 IRS1P35568 1242 aa19.43■□□□□ 0.7
RFFL-211ENST00000584541 CDR2Q01850 454 aa19.43■□□□□ 0.7
RFFL-211ENST00000584541 RAB33AQ14088 237 aa19.43■□□□□ 0.7
RFFL-211ENST00000584541 PPP1R26Q5T8A7 1209 aaPredicted RBP19.43■□□□□ 0.7
RFFL-211ENST00000584541 E4F1Q66K89 784 aaPredicted RBP19.43■□□□□ 0.7
RFFL-211ENST00000584541 TPGS2Q68CL5 300 aa19.43■□□□□ 0.7
RFFL-211ENST00000584541 NOP9Q86U38 636 aaKnown RBP19.43■□□□□ 0.7
RFFL-211ENST00000584541 LRRTM3Q86VH5 581 aa19.43■□□□□ 0.7
RFFL-211ENST00000584541 SPPL2BQ8TCT7 592 aa19.43■□□□□ 0.7
RFFL-211ENST00000584541 SLC2A14Q8TDB8 520 aa19.43■□□□□ 0.7
RFFL-211ENST00000584541 TFAP2BQ92481 460 aa19.43■□□□□ 0.7
RFFL-211ENST00000584541 PPP2R3CQ969Q6 453 aa19.43■□□□□ 0.7
RFFL-211ENST00000584541 MRPL38Q96DV4 380 aaKnown RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms