RNA–Protein interactions for RNA: ENST00000584054.5

EIF4A1-231, Transcript of eukaryotic translation initiation factor 4A1, human

TSL 2

Gene EIF4A1, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF4A1-231	ENST00000584054	NDUFV1	P49821	464 aa		10.63	□□□□□ -0.71
EIF4A1-231	ENST00000584054	MRE11	P49959	708 aa		10.63	□□□□□ -0.71
EIF4A1-231	ENST00000584054	FXR1	P51114	621 aa	Known RBP eCLIP	10.63	□□□□□ -0.71
EIF4A1-231	ENST00000584054	POLR2F	P61218	127 aa	Known RBP	10.63	□□□□□ -0.71
EIF4A1-231	ENST00000584054	ZBED6	P86452	979 aa		10.63	□□□□□ -0.71
EIF4A1-231	ENST00000584054	LRMP	Q12912	555 aa		10.63	□□□□□ -0.71
EIF4A1-231	ENST00000584054	PSMD5	Q16401	504 aa		10.63	□□□□□ -0.71
EIF4A1-231	ENST00000584054	PTPN21	Q16825	1174 aa		10.63	□□□□□ -0.71
EIF4A1-231	ENST00000584054	CFAP221	Q4G0U5	840 aa		10.63	□□□□□ -0.71
EIF4A1-231	ENST00000584054	PRSS55	Q6UWB4	352 aa	Predicted RBP	10.63	□□□□□ -0.71
EIF4A1-231	ENST00000584054	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	10.63	□□□□□ -0.71
EIF4A1-231	ENST00000584054	DRC7	Q8IY82	874 aa		10.63	□□□□□ -0.71
EIF4A1-231	ENST00000584054	THEM5	Q8N1Q8	247 aa		10.63	□□□□□ -0.71
EIF4A1-231	ENST00000584054	NEK11	Q8NG66	645 aa		10.63	□□□□□ -0.71
EIF4A1-231	ENST00000584054	C2orf15	Q8WU43	125 aa	Known RBP	10.63	□□□□□ -0.71
EIF4A1-231	ENST00000584054	DDX1	Q92499	740 aa	Known RBP	10.63	□□□□□ -0.71
EIF4A1-231	ENST00000584054	TMEM176A	Q96HP8	235 aa		10.63	□□□□□ -0.71
EIF4A1-231	ENST00000584054	FUBP3	Q96I24	572 aa	Known RBP eCLIP	10.63	□□□□□ -0.71
EIF4A1-231	ENST00000584054	TNIP3	Q96KP6	325 aa		10.63	□□□□□ -0.71
EIF4A1-231	ENST00000584054	TMEM209	Q96SK2	561 aa		10.63	□□□□□ -0.71
EIF4A1-231	ENST00000584054	MMS19	Q96T76	1030 aa		10.63	□□□□□ -0.71
EIF4A1-231	ENST00000584054	CDCA3	Q99618	268 aa	Predicted RBP	10.63	□□□□□ -0.71
EIF4A1-231	ENST00000584054	HNRNPAB	Q99729	332 aa	Known RBP	10.63	□□□□□ -0.71
EIF4A1-231	ENST00000584054	TCF25	Q9BQ70	676 aa		10.63	□□□□□ -0.71
EIF4A1-231	ENST00000584054	NT5C1A	Q9BXI3	368 aa		10.63	□□□□□ -0.71
EIF4A1-231	ENST00000584054	RHOBTB2	Q9BYZ6	727 aa		10.63	□□□□□ -0.71
EIF4A1-231	ENST00000584054	TRIM5	Q9C035	493 aa		10.63	□□□□□ -0.71
EIF4A1-231	ENST00000584054	CSNK1G1	Q9HCP0	422 aa		10.63	□□□□□ -0.71
EIF4A1-231	ENST00000584054	ABCB6	Q9NP58	842 aa		10.63	□□□□□ -0.71
EIF4A1-231	ENST00000584054	TMLHE	Q9NVH6	421 aa		10.63	□□□□□ -0.71
EIF4A1-231	ENST00000584054	MTUS1	Q9ULD2	1270 aa		10.63	□□□□□ -0.71
EIF4A1-231	ENST00000584054	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	10.63	□□□□□ -0.71	4e-11	■■□□□ 12.3
EIF4A1-231	ENST00000584054	MTCH2	Q9Y6C9	303 aa		10.63	□□□□□ -0.71
EIF4A1-231	ENST00000584054	COL4A4	P53420	1690 aa	Predicted RBP	10.63	□□□□□ -0.71
EIF4A1-231	ENST00000584054	WDR27	A2RRH5	827 aa		10.62	□□□□□ -0.71
EIF4A1-231	ENST00000584054	HCRT	O43612	131 aa		10.62	□□□□□ -0.71
EIF4A1-231	ENST00000584054	CLASP2	O75122	1294 aa	Known RBP	10.62	□□□□□ -0.71
EIF4A1-231	ENST00000584054	ADCY5	O95622	1261 aa		10.62	□□□□□ -0.71
EIF4A1-231	ENST00000584054	ATF2	P15336	505 aa		10.62	□□□□□ -0.71
EIF4A1-231	ENST00000584054	SOX5	P35711	763 aa		10.62	□□□□□ -0.71
EIF4A1-231	ENST00000584054	MAGEA11	P43364	429 aa		10.62	□□□□□ -0.71
EIF4A1-231	ENST00000584054	CLCN4	P51793	760 aa		10.62	□□□□□ -0.71
EIF4A1-231	ENST00000584054	ROR1	Q01973	937 aa		10.62	□□□□□ -0.71
EIF4A1-231	ENST00000584054	TRIM14	Q14142	442 aa		10.62	□□□□□ -0.71
EIF4A1-231	ENST00000584054	CNGA2	Q16280	664 aa		10.62	□□□□□ -0.71
EIF4A1-231	ENST00000584054	NFE2	Q16621	373 aa	Predicted RBP	10.62	□□□□□ -0.71
EIF4A1-231	ENST00000584054	PTPRO	Q16827	1216 aa		10.62	□□□□□ -0.71
EIF4A1-231	ENST00000584054	DUSP6	Q16828	381 aa		10.62	□□□□□ -0.71
EIF4A1-231	ENST00000584054	CTC1	Q2NKJ3	1217 aa		10.62	□□□□□ -0.71
EIF4A1-231	ENST00000584054	CTXN3	Q4LDR2	81 aa		10.62	□□□□□ -0.71
EIF4A1-231	ENST00000584054	E4F1	Q66K89	784 aa	Predicted RBP	10.62	□□□□□ -0.71
EIF4A1-231	ENST00000584054	HGSNAT	Q68CP4	663 aa		10.62	□□□□□ -0.71
EIF4A1-231	ENST00000584054	LCLAT1	Q6UWP7	414 aa		10.62	□□□□□ -0.71
EIF4A1-231	ENST00000584054	TMC7	Q7Z402	723 aa		10.62	□□□□□ -0.71
EIF4A1-231	ENST00000584054	TCEAL8	Q8IYN2	117 aa		10.62	□□□□□ -0.71
EIF4A1-231	ENST00000584054	FUK	Q8N0W3	1084 aa		10.62	□□□□□ -0.71
EIF4A1-231	ENST00000584054	B3GALNT2	Q8NCR0	500 aa		10.62	□□□□□ -0.71
EIF4A1-231	ENST00000584054	OR6B3	Q8NGW1	331 aa		10.62	□□□□□ -0.71
EIF4A1-231	ENST00000584054	GDPD5	Q8WTR4	605 aa		10.62	□□□□□ -0.71
EIF4A1-231	ENST00000584054	AUTS2	Q8WXX7	1259 aa		10.62	□□□□□ -0.71
EIF4A1-231	ENST00000584054	TFAP2B	Q92481	460 aa		10.62	□□□□□ -0.71
EIF4A1-231	ENST00000584054	PDLIM2	Q96JY6	352 aa		10.62	□□□□□ -0.71
EIF4A1-231	ENST00000584054	CEP295NL	Q96MC4	621 aa		10.62	□□□□□ -0.71
EIF4A1-231	ENST00000584054	DNAJC7	Q99615	494 aa		10.62	□□□□□ -0.71
EIF4A1-231	ENST00000584054	SYT15	Q9BQS2	421 aa		10.62	□□□□□ -0.71
EIF4A1-231	ENST00000584054	UBXN6	Q9BZV1	441 aa		10.62	□□□□□ -0.71
EIF4A1-231	ENST00000584054	NUCKS1	Q9H1E3	243 aa	Known RBP	10.62	□□□□□ -0.71
EIF4A1-231	ENST00000584054	SNX25	Q9H3E2	840 aa		10.62	□□□□□ -0.71
EIF4A1-231	ENST00000584054	DPEP3	Q9H4B8	488 aa		10.62	□□□□□ -0.71
EIF4A1-231	ENST00000584054	CERS4	Q9HA82	394 aa		10.62	□□□□□ -0.71
EIF4A1-231	ENST00000584054	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	10.62	□□□□□ -0.71	2e-20	■■■■■ 307.7
EIF4A1-231	ENST00000584054	AFF4	Q9UHB7	1163 aa	Known RBP	10.62	□□□□□ -0.71
EIF4A1-231	ENST00000584054	NOCT	Q9UK39	431 aa	Known RBP	10.62	□□□□□ -0.71
EIF4A1-231	ENST00000584054	PCDHGC3	Q9UN70	934 aa		10.62	□□□□□ -0.71
EIF4A1-231	ENST00000584054	CDY1	Q9Y6F8	540 aa		10.62	□□□□□ -0.71
EIF4A1-231	ENST00000584054	MTMR11	A4FU01	709 aa		10.61	□□□□□ -0.71
EIF4A1-231	ENST00000584054		A8MXQ7	604 aa		10.61	□□□□□ -0.71
EIF4A1-231	ENST00000584054		O00370	1275 aa		10.61	□□□□□ -0.71
EIF4A1-231	ENST00000584054	PES1	O00541	588 aa	Known RBP	10.61	□□□□□ -0.71
EIF4A1-231	ENST00000584054	ATP2C2	O75185	946 aa		10.61	□□□□□ -0.71
EIF4A1-231	ENST00000584054	VDR	P11473	427 aa		10.61	□□□□□ -0.71
EIF4A1-231	ENST00000584054	TRIM21	P19474	475 aa	Known RBP	10.61	□□□□□ -0.71
EIF4A1-231	ENST00000584054	CDH5	P33151	784 aa	Predicted RBP	10.61	□□□□□ -0.71
EIF4A1-231	ENST00000584054	OR1D2	P34982	312 aa		10.61	□□□□□ -0.71
EIF4A1-231	ENST00000584054	STAT1	P42224	750 aa		10.61	□□□□□ -0.71
EIF4A1-231	ENST00000584054	CDK17	Q00537	523 aa		10.61	□□□□□ -0.71
EIF4A1-231	ENST00000584054	BMS1	Q14692	1282 aa	Known RBP	10.61	□□□□□ -0.71
EIF4A1-231	ENST00000584054	MAPRE1	Q15691	268 aa	Known RBP	10.61	□□□□□ -0.71
EIF4A1-231	ENST00000584054	ZNF697	Q5TEC3	545 aa		10.61	□□□□□ -0.71
EIF4A1-231	ENST00000584054	KIAA1841	Q6NSI8	718 aa		10.61	□□□□□ -0.71
EIF4A1-231	ENST00000584054	TMEM270	Q6UE05	265 aa		10.61	□□□□□ -0.71
EIF4A1-231	ENST00000584054	SCARA5	Q6ZMJ2	495 aa		10.61	□□□□□ -0.71
EIF4A1-231	ENST00000584054	ADGRD2	Q7Z7M1	963 aa		10.61	□□□□□ -0.71
EIF4A1-231	ENST00000584054	PPFIBP1	Q86W92	1011 aa		10.61	□□□□□ -0.71
EIF4A1-231	ENST00000584054	CEP57	Q86XR8	500 aa		10.61	□□□□□ -0.71
EIF4A1-231	ENST00000584054	FMNL3	Q8IVF7	1028 aa		10.61	□□□□□ -0.71
EIF4A1-231	ENST00000584054	DCP1B	Q8IZD4	617 aa	Known RBP	10.61	□□□□□ -0.71
EIF4A1-231	ENST00000584054	TC2N	Q8N9U0	490 aa		10.61	□□□□□ -0.71
EIF4A1-231	ENST00000584054	RBBP8NL	Q8NC74	664 aa	Predicted RBP	10.61	□□□□□ -0.71
EIF4A1-231	ENST00000584054	SPPL2B	Q8TCT7	592 aa		10.61	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 52 ms