RNA–Protein interactions for RNA: ENST00000582242.1

CDH8-207, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-207ENST00000582242 ATRNL1Q5VV63 1379 aa9.45□□□□□ -0.9
CDH8-207ENST00000582242 COL18A1P39060 1754 aa9.45□□□□□ -0.9
CDH8-207ENST00000582242 PMS2P1A4D2B8 440 aa9.44□□□□□ -0.9
CDH8-207ENST00000582242 TEX33O43247 280 aa9.44□□□□□ -0.9
CDH8-207ENST00000582242 ALOX15P16050 662 aaPredicted RBP9.44□□□□□ -0.9
CDH8-207ENST00000582242 ZKSCAN1P17029 563 aaPredicted RBP9.44□□□□□ -0.9
CDH8-207ENST00000582242 FPR1P21462 350 aa9.44□□□□□ -0.9
CDH8-207ENST00000582242 SMARCA1P28370 1054 aa9.44□□□□□ -0.9
CDH8-207ENST00000582242 G3BP1Q13283 466 aaKnown RBP eCLIP9.44□□□□□ -0.9
CDH8-207ENST00000582242 GAS2L3Q86XJ1 694 aa9.44□□□□□ -0.9
CDH8-207ENST00000582242 UNC5CLQ8IV45 518 aa9.44□□□□□ -0.9
CDH8-207ENST00000582242 PHKBQ93100 1093 aa9.44□□□□□ -0.9
CDH8-207ENST00000582242 TBCBQ99426 244 aa9.44□□□□□ -0.9
CDH8-207ENST00000582242 LSG1Q9H089 658 aaKnown RBP9.44□□□□□ -0.9
CDH8-207ENST00000582242 MOCS1Q9NZB8 636 aa9.44□□□□□ -0.9
CDH8-207ENST00000582242 ACTL7AQ9Y615 435 aa9.44□□□□□ -0.9
CDH8-207ENST00000582242 ARFGEF2Q9Y6D5 1785 aa9.43□□□□□ -0.9
CDH8-207ENST00000582242 A0A1W2PPL8 197 aa9.43□□□□□ -0.9
CDH8-207ENST00000582242 WNT10BO00744 389 aa9.43□□□□□ -0.9
CDH8-207ENST00000582242 KCNQ3O43525 872 aa9.43□□□□□ -0.9
CDH8-207ENST00000582242 LETM1O95202 739 aaPredicted RBP9.43□□□□□ -0.9
CDH8-207ENST00000582242 TSPAN15O95858 294 aa9.43□□□□□ -0.9
CDH8-207ENST00000582242 C1QTNF9P0C862 333 aa9.43□□□□□ -0.9
CDH8-207ENST00000582242 PRDX5P30044 214 aa9.43□□□□□ -0.9
CDH8-207ENST00000582242 CASRP41180 1078 aa9.43□□□□□ -0.9
CDH8-207ENST00000582242 FLT3LGP49771 235 aa9.43□□□□□ -0.9
CDH8-207ENST00000582242 AFF3P51826 1226 aaKnown RBP9.43□□□□□ -0.9
CDH8-207ENST00000582242 LINC00310P59036 64 aa9.43□□□□□ -0.9
CDH8-207ENST00000582242 PKP1Q13835 747 aa9.43□□□□□ -0.9
CDH8-207ENST00000582242 ZNF568Q3ZCX4 644 aa9.43□□□□□ -0.9
CDH8-207ENST00000582242 FLYWCH1Q4VC44 716 aa9.43□□□□□ -0.9
CDH8-207ENST00000582242 PLXDC1Q8IUK5 500 aa9.43□□□□□ -0.9
CDH8-207ENST00000582242 CMTM4Q8IZR5 234 aa9.43□□□□□ -0.9
CDH8-207ENST00000582242 SH2D3CQ8N5H7 860 aa9.43□□□□□ -0.9
CDH8-207ENST00000582242 DCBLD1Q8N8Z6 715 aa9.43□□□□□ -0.9
CDH8-207ENST00000582242 LINC01356Q8N9X3 169 aa9.43□□□□□ -0.9
CDH8-207ENST00000582242 FBXO18Q8NFZ0 1043 aa9.43□□□□□ -0.9
CDH8-207ENST00000582242 MDM1Q8TC05 714 aa9.43□□□□□ -0.9
CDH8-207ENST00000582242 RABGGTAQ92696 567 aa9.43□□□□□ -0.9
CDH8-207ENST00000582242 GPHA2Q96T91 129 aa9.43□□□□□ -0.9
CDH8-207ENST00000582242 SNX14Q9Y5W7 946 aa9.43□□□□□ -0.9
CDH8-207ENST00000582242 TNS3Q68CZ2 1445 aa9.42□□□□□ -0.9
CDH8-207ENST00000582242 NPHP3Q7Z494 1330 aa9.42□□□□□ -0.9
CDH8-207ENST00000582242 RASA4BC9J798 803 aa9.42□□□□□ -0.9
CDH8-207ENST00000582242 MYO1FO00160 1098 aa9.42□□□□□ -0.9
CDH8-207ENST00000582242 RASA4O43374 803 aa9.42□□□□□ -0.9
CDH8-207ENST00000582242 PSMA5P28066 241 aa9.42□□□□□ -0.9
CDH8-207ENST00000582242 PIK3CBP42338 1070 aa9.42□□□□□ -0.9
CDH8-207ENST00000582242 ACAP1Q15027 740 aa9.42□□□□□ -0.9
CDH8-207ENST00000582242 ANKRD1Q15327 319 aa9.42□□□□□ -0.9
CDH8-207ENST00000582242 RNF151Q2KHN1 245 aa9.42□□□□□ -0.9
CDH8-207ENST00000582242 FAM47AQ5JRC9 791 aa9.42□□□□□ -0.9
CDH8-207ENST00000582242 VPS53Q5VIR6 699 aa9.42□□□□□ -0.9
CDH8-207ENST00000582242 XRRA1Q6P2D8 792 aa9.42□□□□□ -0.9
CDH8-207ENST00000582242 TSHZ1Q6ZSZ6 1077 aa9.42□□□□□ -0.9
CDH8-207ENST00000582242 AACSQ86V21 672 aa9.42□□□□□ -0.9
CDH8-207ENST00000582242 ZSCAN30Q86W11 494 aa9.42□□□□□ -0.9
CDH8-207ENST00000582242 TICAM2Q86XR7 235 aa9.42□□□□□ -0.9
CDH8-207ENST00000582242 FAM90A1Q86YD7 464 aa9.42□□□□□ -0.9
CDH8-207ENST00000582242 OR5M3Q8NGP4 307 aa9.42□□□□□ -0.9
CDH8-207ENST00000582242 BRIX1Q8TDN6 353 aaKnown RBP9.42□□□□□ -0.9
CDH8-207ENST00000582242 CFHR4Q92496 578 aa9.42□□□□□ -0.9
CDH8-207ENST00000582242 RPL10LQ96L21 214 aaKnown RBP9.42□□□□□ -0.9
CDH8-207ENST00000582242 SGCZQ96LD1 299 aa9.42□□□□□ -0.9
CDH8-207ENST00000582242 CCDC138Q96M89 665 aa9.42□□□□□ -0.9
CDH8-207ENST00000582242 TTC14Q96N46 770 aa9.42□□□□□ -0.9
CDH8-207ENST00000582242 SARS2Q9NP81 518 aaKnown RBP9.42□□□□□ -0.9
CDH8-207ENST00000582242 PLCB1Q9NQ66 1216 aa9.42□□□□□ -0.9
CDH8-207ENST00000582242 SIDT1Q9NXL6 827 aaKnown RBP9.42□□□□□ -0.9
CDH8-207ENST00000582242 SMC3Q9UQE7 1217 aa9.42□□□□□ -0.9
CDH8-207ENST00000582242 DMTF1Q9Y222 760 aa9.42□□□□□ -0.9
CDH8-207ENST00000582242 NR2E1Q9Y466 385 aa9.42□□□□□ -0.9
CDH8-207ENST00000582242 SLC4A7Q9Y6M7 1214 aa9.42□□□□□ -0.9
CDH8-207ENST00000582242 KDM6AO15550 1401 aaPredicted RBP9.41□□□□□ -0.9
CDH8-207ENST00000582242 CCDC171Q6TFL3 1326 aa9.41□□□□□ -0.9
CDH8-207ENST00000582242 MROH6A6NGR9 719 aa9.41□□□□□ -0.9
CDH8-207ENST00000582242 RHPN2P1A8MT19 583 aa9.41□□□□□ -0.9
CDH8-207ENST00000582242 F2RL2O00254 374 aa9.41□□□□□ -0.9
CDH8-207ENST00000582242 FOXN3O00409 490 aaPredicted RBP9.41□□□□□ -0.9
CDH8-207ENST00000582242 MSNP26038 577 aaKnown RBP9.41□□□□□ -0.9
CDH8-207ENST00000582242 ALDH1A3P47895 512 aa9.41□□□□□ -0.9
CDH8-207ENST00000582242 PRIM2P49643 509 aa9.41□□□□□ -0.9
CDH8-207ENST00000582242 GZMKP49863 264 aa9.41□□□□□ -0.9
CDH8-207ENST00000582242 CASP5P51878 434 aa9.41□□□□□ -0.9
CDH8-207ENST00000582242 ATP2B3Q16720 1220 aa9.41□□□□□ -0.9
CDH8-207ENST00000582242 ZNF790Q6PG37 636 aa9.41□□□□□ -0.9
CDH8-207ENST00000582242 ADGRE4PQ86SQ3 457 aa9.41□□□□□ -0.9
CDH8-207ENST00000582242 KBTBD2Q8IY47 623 aa9.41□□□□□ -0.9
CDH8-207ENST00000582242 TTC5Q8N0Z6 440 aa9.41□□□□□ -0.9
CDH8-207ENST00000582242 FAM184AQ8NB25 1140 aa9.41□□□□□ -0.9
CDH8-207ENST00000582242 TP53I13Q8NBR0 393 aaPredicted RBP9.41□□□□□ -0.9
CDH8-207ENST00000582242 GPT2Q8TD30 523 aa9.41□□□□□ -0.9
CDH8-207ENST00000582242 STON2Q8WXE9 905 aa9.41□□□□□ -0.9
CDH8-207ENST00000582242 UPF3BQ9BZI7 483 aaKnown RBP9.41□□□□□ -0.9
CDH8-207ENST00000582242 KCNH6Q9H252 994 aa9.41□□□□□ -0.9
CDH8-207ENST00000582242 MRPL46Q9H2W6 279 aaKnown RBP9.41□□□□□ -0.9
CDH8-207ENST00000582242 CNNM1Q9NRU3 951 aa9.41□□□□□ -0.9
CDH8-207ENST00000582242 FNIP2Q9P278 1114 aa9.41□□□□□ -0.9
CDH8-207ENST00000582242 CYP46A1Q9Y6A2 500 aa9.41□□□□□ -0.9
CDH8-207ENST00000582242 ISM1B1AKI9 464 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms