RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.7□□□□□ -0.06
CDK5RAP3-219ENST00000580670 CEP83Q9Y592 693 aa14.7□□□□□ -0.06
CDK5RAP3-219ENST00000580670 DUSP10Q9Y6W6 482 aa14.7□□□□□ -0.06
CDK5RAP3-219ENST00000580670 ATP8B3O60423 1300 aa14.7□□□□□ -0.06
CDK5RAP3-219ENST00000580670 NT5C1B-RDH14C9J2C7 533 aa14.69□□□□□ -0.06
CDK5RAP3-219ENST00000580670 MICAL2O94851 1124 aa14.69□□□□□ -0.06
CDK5RAP3-219ENST00000580670 LSM8O95777 96 aaKnown RBP14.69□□□□□ -0.06
CDK5RAP3-219ENST00000580670 ABCB4P21439 1286 aa14.69□□□□□ -0.06
CDK5RAP3-219ENST00000580670 NSFP46459 744 aaKnown RBP14.69□□□□□ -0.06
CDK5RAP3-219ENST00000580670 ALDH7A1P49419 539 aaKnown RBP14.69□□□□□ -0.06
CDK5RAP3-219ENST00000580670 PSMC1P62191 440 aaKnown RBP14.69□□□□□ -0.06
CDK5RAP3-219ENST00000580670 NOMO3P69849 1222 aa14.69□□□□□ -0.06
CDK5RAP3-219ENST00000580670 STILQ15468 1287 aa14.69□□□□□ -0.06
CDK5RAP3-219ENST00000580670 PTPN14Q15678 1187 aa14.69□□□□□ -0.06
CDK5RAP3-219ENST00000580670 PPP1R26Q5T8A7 1209 aaPredicted RBP14.69□□□□□ -0.06
CDK5RAP3-219ENST00000580670 OVOS1Q6IE37 1185 aa14.69□□□□□ -0.06
CDK5RAP3-219ENST00000580670 DENND1BQ6P3S1 775 aa14.69□□□□□ -0.06
CDK5RAP3-219ENST00000580670 B3GALNT2Q8NCR0 500 aa14.69□□□□□ -0.06
CDK5RAP3-219ENST00000580670 TMEM35BQ8NCS4 154 aa14.69□□□□□ -0.06
CDK5RAP3-219ENST00000580670 LPIN3Q9BQK8 851 aa14.69□□□□□ -0.06
CDK5RAP3-219ENST00000580670 CXXC1Q9P0U4 656 aaPredicted RBP14.69□□□□□ -0.06
CDK5RAP3-219ENST00000580670 TSC2P49815 1807 aa14.68□□□□□ -0.06
CDK5RAP3-219ENST00000580670 MACROD2A1Z1Q3 448 aa14.68□□□□□ -0.06
CDK5RAP3-219ENST00000580670 ANKRD62A6NC57 917 aa14.68□□□□□ -0.06
CDK5RAP3-219ENST00000580670 M0QYV0 167 aa14.68□□□□□ -0.06
CDK5RAP3-219ENST00000580670 ATP2C2O75185 946 aa14.68□□□□□ -0.06
CDK5RAP3-219ENST00000580670 PTPN1P18031 435 aaKnown RBP14.68□□□□□ -0.06
CDK5RAP3-219ENST00000580670 PCSK1P29120 753 aa14.68□□□□□ -0.06
CDK5RAP3-219ENST00000580670 TKTP29401 623 aaKnown RBP14.68□□□□□ -0.06
CDK5RAP3-219ENST00000580670 CENPCQ03188 943 aa14.68□□□□□ -0.06
CDK5RAP3-219ENST00000580670 GOLGA7BQ2TAP0 167 aa14.68□□□□□ -0.06
CDK5RAP3-219ENST00000580670 ARHGAP17Q68EM7 881 aa14.68□□□□□ -0.06
CDK5RAP3-219ENST00000580670 LCLAT1Q6UWP7 414 aa14.68□□□□□ -0.06
CDK5RAP3-219ENST00000580670 NYAP1Q6ZVC0 841 aa14.68□□□□□ -0.06
CDK5RAP3-219ENST00000580670 C1orf131Q8NDD1 294 aaKnown RBP14.68□□□□□ -0.06
CDK5RAP3-219ENST00000580670 CTNNBL1Q8WYA6 563 aaPredicted RBP14.68□□□□□ -0.06
CDK5RAP3-219ENST00000580670 HERVK_113Q902F9 699 aa14.68□□□□□ -0.06
CDK5RAP3-219ENST00000580670 SYT15Q9BQS2 421 aa14.68□□□□□ -0.06
CDK5RAP3-219ENST00000580670 THAP2Q9H0W7 228 aa14.68□□□□□ -0.06
CDK5RAP3-219ENST00000580670 LHX5Q9H2C1 402 aa14.68□□□□□ -0.06
CDK5RAP3-219ENST00000580670 TSPAN16Q9UKR8 245 aa14.68□□□□□ -0.06
CDK5RAP3-219ENST00000580670 PTPRSQ13332 1948 aa14.68□□□□□ -0.06
CDK5RAP3-219ENST00000580670 SYN3O14994 580 aa14.68□□□□□ -0.06
CDK5RAP3-219ENST00000580670 TMEM253P0C7T8 217 aa14.68□□□□□ -0.06
CDK5RAP3-219ENST00000580670 CCDC130P13994 396 aa14.68□□□□□ -0.06
CDK5RAP3-219ENST00000580670 CDH5P33151 784 aaPredicted RBP14.68□□□□□ -0.06
CDK5RAP3-219ENST00000580670 CBX1P83916 185 aa14.68□□□□□ -0.06
CDK5RAP3-219ENST00000580670 YWHAHQ04917 246 aaPredicted RBP14.68□□□□□ -0.06
CDK5RAP3-219ENST00000580670 FAM171A1Q5VUB5 890 aa14.68□□□□□ -0.06
CDK5RAP3-219ENST00000580670 KIAA0319Q5VV43 1072 aa14.68□□□□□ -0.06
CDK5RAP3-219ENST00000580670 PPP1R2P3Q6NXS1 205 aa14.68□□□□□ -0.06
CDK5RAP3-219ENST00000580670 FUT10Q6P4F1 479 aa14.68□□□□□ -0.06
CDK5RAP3-219ENST00000580670 TMEM173Q86WV6 379 aaPredicted RBP14.68□□□□□ -0.06
CDK5RAP3-219ENST00000580670 THEM5Q8N1Q8 247 aa14.68□□□□□ -0.06
CDK5RAP3-219ENST00000580670 RTP3Q9BQQ7 232 aa14.68□□□□□ -0.06
CDK5RAP3-219ENST00000580670 ZBED2Q9BTP6 218 aa14.68□□□□□ -0.06
CDK5RAP3-219ENST00000580670 IRX2Q9BZI1 471 aaPredicted RBP14.68□□□□□ -0.06
CDK5RAP3-219ENST00000580670 GPR62Q9BZJ7 368 aa14.68□□□□□ -0.06
CDK5RAP3-219ENST00000580670 ZNF518BQ9C0D4 1074 aa14.68□□□□□ -0.06
CDK5RAP3-219ENST00000580670 CDH9Q9ULB4 789 aa14.68□□□□□ -0.06
CDK5RAP3-219ENST00000580670 MRPL42Q9Y6G3 142 aaKnown RBP14.68□□□□□ -0.06
CDK5RAP3-219ENST00000580670 SLC4A7Q9Y6M7 1214 aa14.68□□□□□ -0.06
CDK5RAP3-219ENST00000580670 SF3B1O75533 1304 aaKnown RBP eCLIP14.67□□□□□ -0.061e-11■■■■■ 43.1
CDK5RAP3-219ENST00000580670 KIF5CO60282 957 aa14.67□□□□□ -0.06
CDK5RAP3-219ENST00000580670 GJB5O95377 273 aa14.67□□□□□ -0.06
CDK5RAP3-219ENST00000580670 ADORA2BP29275 332 aa14.67□□□□□ -0.06
CDK5RAP3-219ENST00000580670 ELAVL2Q12926 359 aaKnown RBP14.67□□□□□ -0.06
CDK5RAP3-219ENST00000580670 MDH1BQ5I0G3 518 aa14.67□□□□□ -0.06
CDK5RAP3-219ENST00000580670 CEP57Q86XR8 500 aa14.67□□□□□ -0.06
CDK5RAP3-219ENST00000580670 PHF13Q86YI8 300 aaPredicted RBP14.67□□□□□ -0.06
CDK5RAP3-219ENST00000580670 MCOLN2Q8IZK6 566 aa14.67□□□□□ -0.06
CDK5RAP3-219ENST00000580670 WDTC1Q8N5D0 677 aa14.67□□□□□ -0.06
CDK5RAP3-219ENST00000580670 UBA3Q8TBC4 463 aa14.67□□□□□ -0.06
CDK5RAP3-219ENST00000580670 BCL7CQ8WUZ0 217 aaPredicted RBP14.67□□□□□ -0.06
CDK5RAP3-219ENST00000580670 SECISBP2LQ93073 1101 aaKnown RBP14.67□□□□□ -0.06
CDK5RAP3-219ENST00000580670 ACBD6Q9BR61 282 aa14.67□□□□□ -0.06
CDK5RAP3-219ENST00000580670 CRTAC1Q9NQ79 661 aa14.67□□□□□ -0.06
CDK5RAP3-219ENST00000580670 OGFRQ9NZT2 677 aa14.67□□□□□ -0.06
CDK5RAP3-219ENST00000580670 HESX1Q9UBX0 185 aa14.67□□□□□ -0.06
CDK5RAP3-219ENST00000580670 BTNL10A8MVZ5 291 aa14.66□□□□□ -0.06
CDK5RAP3-219ENST00000580670 NAP1L1P55209 391 aaKnown RBP14.66□□□□□ -0.06
CDK5RAP3-219ENST00000580670 GNG11P61952 73 aa14.66□□□□□ -0.06
CDK5RAP3-219ENST00000580670 GPC5P78333 572 aa14.66□□□□□ -0.06
CDK5RAP3-219ENST00000580670 CCDC142Q17RM4 750 aa14.66□□□□□ -0.06
CDK5RAP3-219ENST00000580670 KCNT2Q6UVM3 1135 aa14.66□□□□□ -0.06
CDK5RAP3-219ENST00000580670 MMS22LQ6ZRQ5 1243 aa14.66□□□□□ -0.06
CDK5RAP3-219ENST00000580670 SLC2A14Q8TDB8 520 aa14.66□□□□□ -0.06
CDK5RAP3-219ENST00000580670 ZNF653Q96CK0 615 aa14.66□□□□□ -0.06
CDK5RAP3-219ENST00000580670 ARHGEF26Q96DR7 871 aa14.66□□□□□ -0.06
CDK5RAP3-219ENST00000580670 ZNF558Q96NG5 402 aa14.66□□□□□ -0.06
CDK5RAP3-219ENST00000580670 SLC9A7Q96T83 725 aa14.66□□□□□ -0.06
CDK5RAP3-219ENST00000580670 C11orf70Q9BRQ4 267 aa14.66□□□□□ -0.06
CDK5RAP3-219ENST00000580670 MTIF3Q9H2K0 278 aaKnown RBP14.66□□□□□ -0.06
CDK5RAP3-219ENST00000580670 ADAM22Q9P0K1 906 aa14.66□□□□□ -0.06
CDK5RAP3-219ENST00000580670 SALL4Q9UJQ4 1053 aa14.66□□□□□ -0.06
CDK5RAP3-219ENST00000580670 NCANO14594 1321 aa14.65□□□□□ -0.06
CDK5RAP3-219ENST00000580670 ATMINO43313 823 aaPredicted RBP14.65□□□□□ -0.06
CDK5RAP3-219ENST00000580670 BUB1O43683 1085 aa14.65□□□□□ -0.06
CDK5RAP3-219ENST00000580670 MOCS3O95396 460 aa14.65□□□□□ -0.06
CDK5RAP3-219ENST00000580670 TNNT1P13805 278 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms