RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 LAMP2P13473 410 aa10.58□□□□□ -0.72
GGA3-209ENST00000580646 P4HA1P13674 534 aa10.58□□□□□ -0.72
GGA3-209ENST00000580646 FSHRP23945 695 aa10.58□□□□□ -0.72
GGA3-209ENST00000580646 ELF1P32519 619 aa10.58□□□□□ -0.72
GGA3-209ENST00000580646 PIK3CAP42336 1068 aa10.58□□□□□ -0.72
GGA3-209ENST00000580646 LHX1P48742 406 aa10.58□□□□□ -0.72
GGA3-209ENST00000580646 MYL6P60660 151 aa10.58□□□□□ -0.72
GGA3-209ENST00000580646 TNNC1P63316 161 aa10.58□□□□□ -0.72
GGA3-209ENST00000580646 NTHL1P78549 312 aa10.58□□□□□ -0.72
GGA3-209ENST00000580646 NHLH1Q02575 133 aa10.58□□□□□ -0.72
GGA3-209ENST00000580646 KCNH2Q12809 1159 aa10.58□□□□□ -0.72
GGA3-209ENST00000580646 KCNJ12Q14500 433 aa10.58□□□□□ -0.72
GGA3-209ENST00000580646 ZNF699Q32M78 642 aa10.58□□□□□ -0.72
GGA3-209ENST00000580646 WDR72Q3MJ13 1102 aa10.58□□□□□ -0.72
GGA3-209ENST00000580646 CTXN3Q4LDR2 81 aa10.58□□□□□ -0.72
GGA3-209ENST00000580646 CBWD6Q4V339 395 aa10.58□□□□□ -0.72
GGA3-209ENST00000580646 TCP11X2Q5H9J9 407 aa10.58□□□□□ -0.72
GGA3-209ENST00000580646 ZNF667Q5HYK9 610 aa10.58□□□□□ -0.72
GGA3-209ENST00000580646 CBWD3Q5JTY5 395 aa10.58□□□□□ -0.72
GGA3-209ENST00000580646 CBWD5Q5RIA9 395 aa10.58□□□□□ -0.72
GGA3-209ENST00000580646 OVOS1Q6IE37 1185 aa10.58□□□□□ -0.72
GGA3-209ENST00000580646 LRSAM1Q6UWE0 723 aa10.58□□□□□ -0.72
GGA3-209ENST00000580646 GET4Q7L5D6 327 aaPredicted RBP10.58□□□□□ -0.72
GGA3-209ENST00000580646 TTC39CQ8N584 583 aa10.58□□□□□ -0.72
GGA3-209ENST00000580646 TAS1R2Q8TE23 839 aa10.58□□□□□ -0.72
GGA3-209ENST00000580646 FAM84AQ96KN4 292 aa10.58□□□□□ -0.72
GGA3-209ENST00000580646 FBXL5Q9UKA1 691 aa10.58□□□□□ -0.72
GGA3-209ENST00000580646 L1RE1Q9UN81 338 aa10.58□□□□□ -0.72
GGA3-209ENST00000580646 SNX9Q9Y5X1 595 aa10.58□□□□□ -0.72
GGA3-209ENST00000580646 TRIOO75962 3097 aa10.58□□□□□ -0.72
GGA3-209ENST00000580646 MYH10P35580 1976 aa10.57□□□□□ -0.72
GGA3-209ENST00000580646 LRRC10BA6NIK2 292 aa10.57□□□□□ -0.72
GGA3-209ENST00000580646 TULP1O00294 542 aaPredicted RBP10.57□□□□□ -0.72
GGA3-209ENST00000580646 PRRG1O14668 218 aa10.57□□□□□ -0.72
GGA3-209ENST00000580646 ATF2P15336 505 aa10.57□□□□□ -0.72
GGA3-209ENST00000580646 ZNF18P17022 549 aa10.57□□□□□ -0.72
GGA3-209ENST00000580646 WARSP23381 471 aaKnown RBP10.57□□□□□ -0.72
GGA3-209ENST00000580646 AVPR2P30518 371 aa10.57□□□□□ -0.72
GGA3-209ENST00000580646 MTIF2P46199 727 aaKnown RBP10.57□□□□□ -0.72
GGA3-209ENST00000580646 ZNF445P59923 1031 aa10.57□□□□□ -0.72
GGA3-209ENST00000580646 NOP14P78316 857 aaKnown RBP10.57□□□□□ -0.72
GGA3-209ENST00000580646 MYL7Q01449 175 aa10.57□□□□□ -0.72
GGA3-209ENST00000580646 SMARCB1Q12824 385 aa10.57□□□□□ -0.72
GGA3-209ENST00000580646 IQCB1Q15051 598 aa10.57□□□□□ -0.72
GGA3-209ENST00000580646 SOWAHAQ2M3V2 549 aa10.57□□□□□ -0.72
GGA3-209ENST00000580646 TPGS2Q68CL5 300 aa10.57□□□□□ -0.72
GGA3-209ENST00000580646 SCARA3Q6AZY7 606 aa10.57□□□□□ -0.72
GGA3-209ENST00000580646 DHX40Q8IX18 779 aaKnown RBP10.57□□□□□ -0.72
GGA3-209ENST00000580646 TCEAL8Q8IYN2 117 aa10.57□□□□□ -0.72
GGA3-209ENST00000580646 THEM5Q8N1Q8 247 aa10.57□□□□□ -0.72
GGA3-209ENST00000580646 PDCL2Q8N4E4 241 aa10.57□□□□□ -0.72
GGA3-209ENST00000580646 SLC44A3Q8N4M1 653 aa10.57□□□□□ -0.72
GGA3-209ENST00000580646 ANKRD20A12PQ8NF67 263 aa10.57□□□□□ -0.72
GGA3-209ENST00000580646 RSAD2Q8WXG1 361 aa10.57□□□□□ -0.72
GGA3-209ENST00000580646 NXPE3Q969Y0 559 aa10.57□□□□□ -0.72
GGA3-209ENST00000580646 ACBD6Q9BR61 282 aa10.57□□□□□ -0.72
GGA3-209ENST00000580646 TUBGCP2Q9BSJ2 902 aa10.57□□□□□ -0.72
GGA3-209ENST00000580646 BCO2Q9BYV7 579 aa10.57□□□□□ -0.72
GGA3-209ENST00000580646 HSD3B7Q9H2F3 369 aa10.57□□□□□ -0.72
GGA3-209ENST00000580646 CYP3A43Q9HB55 503 aa10.57□□□□□ -0.72
GGA3-209ENST00000580646 CYP4F11Q9HBI6 524 aa10.57□□□□□ -0.72
GGA3-209ENST00000580646 SAMSN1Q9NSI8 373 aaKnown RBP10.57□□□□□ -0.72
GGA3-209ENST00000580646 FANCLQ9NW38 375 aa10.57□□□□□ -0.72
GGA3-209ENST00000580646 DNMT3BQ9UBC3 853 aaKnown RBP10.57□□□□□ -0.72
GGA3-209ENST00000580646 HSFX1Q9UBD0 423 aa10.57□□□□□ -0.72
GGA3-209ENST00000580646 LIMA1Q9UHB6 759 aaKnown RBP10.57□□□□□ -0.72
GGA3-209ENST00000580646 DUSP12Q9UNI6 340 aa10.57□□□□□ -0.72
GGA3-209ENST00000580646 TIMM13Q9Y5L4 95 aaPredicted RBP10.57□□□□□ -0.72
GGA3-209ENST00000580646 ZFP37Q9Y6Q3 630 aaPredicted RBP10.57□□□□□ -0.72
GGA3-209ENST00000580646 MYO10Q9HD67 2058 aa10.57□□□□□ -0.72
GGA3-209ENST00000580646 C2orf16Q68DN1 1984 aa10.57□□□□□ -0.72
GGA3-209ENST00000580646 GREB1Q4ZG55 1949 aa10.56□□□□□ -0.72
GGA3-209ENST00000580646 DENND4AQ7Z401 1863 aa10.56□□□□□ -0.72
GGA3-209ENST00000580646 ANHXE9PGG2 379 aa10.56□□□□□ -0.72
GGA3-209ENST00000580646 SEC24AO95486 1093 aa10.56□□□□□ -0.72
GGA3-209ENST00000580646 LRG1P02750 347 aa10.56□□□□□ -0.72
GGA3-209ENST00000580646 TPM2P07951 284 aa10.56□□□□□ -0.72
GGA3-209ENST00000580646 PCSK1P29120 753 aa10.56□□□□□ -0.72
GGA3-209ENST00000580646 VCPP55072 806 aaKnown RBP10.56□□□□□ -0.72
GGA3-209ENST00000580646 INCA1Q0VD86 236 aa10.56□□□□□ -0.72
GGA3-209ENST00000580646 GPR17Q13304 367 aa10.56□□□□□ -0.72
GGA3-209ENST00000580646 PABPC1LQ4VXU2 614 aaKnown RBP10.56□□□□□ -0.72
GGA3-209ENST00000580646 VWA3BQ502W6 1294 aa10.56□□□□□ -0.72
GGA3-209ENST00000580646 WDR44Q5JSH3 913 aa10.56□□□□□ -0.72
GGA3-209ENST00000580646 MIIPQ5JXC2 388 aa10.56□□□□□ -0.72
GGA3-209ENST00000580646 IER5LQ5T953 404 aa10.56□□□□□ -0.72
GGA3-209ENST00000580646 WSCD1Q658N2 575 aa10.56□□□□□ -0.72
GGA3-209ENST00000580646 ADGRF2Q8IZF7 708 aa10.56□□□□□ -0.72
GGA3-209ENST00000580646 AOPEPQ8N6M6 819 aa10.56□□□□□ -0.72
GGA3-209ENST00000580646 LMO3Q8TAP4 145 aa10.56□□□□□ -0.72
GGA3-209ENST00000580646 ITFG1Q8TB96 612 aa10.56□□□□□ -0.72
GGA3-209ENST00000580646 FAM200AQ8TCP9 573 aa10.56□□□□□ -0.72
GGA3-209ENST00000580646 C2orf15Q8WU43 125 aaKnown RBP10.56□□□□□ -0.72
GGA3-209ENST00000580646 KBTBD7Q8WVZ9 684 aa10.56□□□□□ -0.72
GGA3-209ENST00000580646 SEMA4DQ92854 862 aa10.56□□□□□ -0.72
GGA3-209ENST00000580646 FGF13Q92913 245 aa10.56□□□□□ -0.72
GGA3-209ENST00000580646 FAM81BQ96LP2 452 aa10.56□□□□□ -0.72
GGA3-209ENST00000580646 NIF3L1Q9GZT8 377 aa10.56□□□□□ -0.72
GGA3-209ENST00000580646 NDST4Q9H3R1 872 aa10.56□□□□□ -0.72
GGA3-209ENST00000580646 MMRN2Q9H8L6 949 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms