RNA–Protein interactions for RNA: ENST00000580556.5

CCDC84-209, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-209ENST00000580556 PI4K2AQ9BTU6 479 aa12.98□□□□□ -0.33
CCDC84-209ENST00000580556 VN1R3Q9BXE9 311 aa12.98□□□□□ -0.33
CCDC84-209ENST00000580556 CNTNAP3Q9BZ76 1288 aa12.98□□□□□ -0.33
CCDC84-209ENST00000580556 GPR62Q9BZJ7 368 aa12.98□□□□□ -0.33
CCDC84-209ENST00000580556 CYP3A43Q9HB55 503 aa12.98□□□□□ -0.33
CCDC84-209ENST00000580556 APOBEC3GQ9HC16 384 aaKnown RBP12.98□□□□□ -0.33
CCDC84-209ENST00000580556 CHST7Q9NS84 486 aa12.98□□□□□ -0.33
CCDC84-209ENST00000580556 IFNKQ9P0W0 207 aa12.98□□□□□ -0.33
CCDC84-209ENST00000580556 PUF60Q9UHX1 559 aaKnown RBP12.98□□□□□ -0.33
CCDC84-209ENST00000580556 FBXL5Q9UKA1 691 aa12.98□□□□□ -0.33
CCDC84-209ENST00000580556 SNX9Q9Y5X1 595 aa12.98□□□□□ -0.33
CCDC84-209ENST00000580556 R4GN57 208 aa12.98□□□□□ -0.33
CCDC84-209ENST00000580556 WDR87Q6ZQQ6 2873 aa12.98□□□□□ -0.33
CCDC84-209ENST00000580556 ZNF292O60281 2723 aa12.97□□□□□ -0.33
CCDC84-209ENST00000580556 TSC2P49815 1807 aa12.97□□□□□ -0.33
CCDC84-209ENST00000580556 SCN1AP35498 2009 aa12.97□□□□□ -0.33
CCDC84-209ENST00000580556 C2orf71A6NGG8 1288 aa12.97□□□□□ -0.33
CCDC84-209ENST00000580556 CYB561D2O14569 222 aa12.97□□□□□ -0.33
CCDC84-209ENST00000580556 TEX33O43247 280 aa12.97□□□□□ -0.33
CCDC84-209ENST00000580556 HUS1O60921 280 aa12.97□□□□□ -0.33
CCDC84-209ENST00000580556 SLC9A1P19634 815 aa12.97□□□□□ -0.33
CCDC84-209ENST00000580556 BRCC3P46736 316 aa12.97□□□□□ -0.33
CCDC84-209ENST00000580556 ITIH3Q06033 890 aa12.97□□□□□ -0.33
CCDC84-209ENST00000580556 CUL2Q13617 745 aa12.97□□□□□ -0.33
CCDC84-209ENST00000580556 FAM171A1Q5VUB5 890 aa12.97□□□□□ -0.33
CCDC84-209ENST00000580556 DPY19L2P1Q6NXN4 242 aa12.97□□□□□ -0.33
CCDC84-209ENST00000580556 PDXDC1Q6P996 788 aa12.97□□□□□ -0.33
CCDC84-209ENST00000580556 DSTYKQ6XUX3 929 aa12.97□□□□□ -0.33
CCDC84-209ENST00000580556 ZDHHC14Q8IZN3 488 aa12.97□□□□□ -0.33
CCDC84-209ENST00000580556 PDCL2Q8N4E4 241 aa12.97□□□□□ -0.33
CCDC84-209ENST00000580556 TDRD5Q8NAT2 981 aaKnown RBP12.97□□□□□ -0.33
CCDC84-209ENST00000580556 DTWD2Q8NBA8 298 aa12.97□□□□□ -0.33
CCDC84-209ENST00000580556 IQCDQ96DY2 449 aa12.97□□□□□ -0.33
CCDC84-209ENST00000580556 NECTIN4Q96NY8 510 aa12.97□□□□□ -0.33
CCDC84-209ENST00000580556 TTPALQ9BTX7 342 aa12.97□□□□□ -0.33
CCDC84-209ENST00000580556 OXCT2Q9BYC2 517 aaPredicted RBP12.97□□□□□ -0.33
CCDC84-209ENST00000580556 XPO4Q9C0E2 1151 aaKnown RBP12.97□□□□□ -0.33
CCDC84-209ENST00000580556 SIX2Q9NPC8 291 aa12.97□□□□□ -0.33
CCDC84-209ENST00000580556 NGRNQ9NPE2 291 aaKnown RBP12.97□□□□□ -0.33
CCDC84-209ENST00000580556 NXF1Q9UBU9 619 aaKnown RBP12.97□□□□□ -0.33
CCDC84-209ENST00000580556 NCOR2Q9Y618 2525 aa12.97□□□□□ -0.33
CCDC84-209ENST00000580556 ITIH6Q6UXX5 1313 aa12.96□□□□□ -0.33
CCDC84-209ENST00000580556 GOLGA6L3A6NEY3 463 aa12.96□□□□□ -0.33
CCDC84-209ENST00000580556 LRRN2O75325 713 aa12.96□□□□□ -0.33
CCDC84-209ENST00000580556 CLSTN1O94985 981 aa12.96□□□□□ -0.33
CCDC84-209ENST00000580556 OAZ2O95190 189 aa12.96□□□□□ -0.33
CCDC84-209ENST00000580556 CTSAP10619 480 aa12.96□□□□□ -0.33
CCDC84-209ENST00000580556 EPCAMP16422 314 aa12.96□□□□□ -0.33
CCDC84-209ENST00000580556 CA8P35219 290 aa12.96□□□□□ -0.33
CCDC84-209ENST00000580556 MTHFRP42898 656 aa12.96□□□□□ -0.33
CCDC84-209ENST00000580556 YWHAEP62258 255 aaKnown RBP12.96□□□□□ -0.33
CCDC84-209ENST00000580556 DSG1Q02413 1049 aa12.96□□□□□ -0.33
CCDC84-209ENST00000580556 CREMQ03060 361 aa12.96□□□□□ -0.33
CCDC84-209ENST00000580556 INCA1Q0VD86 236 aa12.96□□□□□ -0.33
CCDC84-209ENST00000580556 SOWAHAQ2M3V2 549 aa12.96□□□□□ -0.33
CCDC84-209ENST00000580556 FIGNQ5HY92 759 aa12.96□□□□□ -0.33
CCDC84-209ENST00000580556 SPOPLQ6IQ16 392 aa12.96□□□□□ -0.33
CCDC84-209ENST00000580556 PHLDB3Q6NSJ2 640 aa12.96□□□□□ -0.33
CCDC84-209ENST00000580556 ANKS3Q6ZW76 656 aa12.96□□□□□ -0.33
CCDC84-209ENST00000580556 ADGRF2Q8IZF7 708 aa12.96□□□□□ -0.33
CCDC84-209ENST00000580556 PPM1KQ8N3J5 372 aa12.96□□□□□ -0.33
CCDC84-209ENST00000580556 DCLK2Q8N568 766 aa12.96□□□□□ -0.33
CCDC84-209ENST00000580556 MRPL43Q8N983 215 aaKnown RBP12.96□□□□□ -0.33
CCDC84-209ENST00000580556 AUTS2Q8WXX7 1259 aa12.96□□□□□ -0.33
CCDC84-209ENST00000580556 PIK3R5Q8WYR1 880 aa12.96□□□□□ -0.33
CCDC84-209ENST00000580556 MRFAP1L1Q96HT8 127 aa12.96□□□□□ -0.33
CCDC84-209ENST00000580556 LSM14BQ9BX40 385 aaKnown RBP12.96□□□□□ -0.33
CCDC84-209ENST00000580556 ZBP1Q9H171 429 aa12.96□□□□□ -0.33
CCDC84-209ENST00000580556 L1RE1Q9UN81 338 aa12.96□□□□□ -0.33
CCDC84-209ENST00000580556 SSX2IPQ9Y2D8 614 aa12.96□□□□□ -0.33
CCDC84-209ENST00000580556 IRAK3Q9Y616 596 aa12.96□□□□□ -0.33
CCDC84-209ENST00000580556 DENND4AQ7Z401 1863 aa12.95□□□□□ -0.34
CCDC84-209ENST00000580556 ZFHX4Q86UP3 3567 aa12.95□□□□□ -0.34
CCDC84-209ENST00000580556 H7C4K7 107 aa12.95□□□□□ -0.34
CCDC84-209ENST00000580556 I3L4J1 428 aa12.95□□□□□ -0.34
CCDC84-209ENST00000580556 GABRDO14764 452 aa12.95□□□□□ -0.34
CCDC84-209ENST00000580556 NOL4O94818 638 aa12.95□□□□□ -0.34
CCDC84-209ENST00000580556 LMNAP02545 664 aaKnown RBP12.95□□□□□ -0.34
CCDC84-209ENST00000580556 URODP06132 367 aa12.95□□□□□ -0.34
CCDC84-209ENST00000580556 UCHL3P15374 230 aa12.95□□□□□ -0.34
CCDC84-209ENST00000580556 WARSP23381 471 aaKnown RBP12.95□□□□□ -0.34
CCDC84-209ENST00000580556 TKTP29401 623 aaKnown RBP12.95□□□□□ -0.34
CCDC84-209ENST00000580556 LHX1P48742 406 aa12.95□□□□□ -0.34
CCDC84-209ENST00000580556 GLUD2P49448 558 aa12.95□□□□□ -0.34
CCDC84-209ENST00000580556 YWHAHQ04917 246 aaPredicted RBP12.95□□□□□ -0.34
CCDC84-209ENST00000580556 MRPL58Q14197 206 aaKnown RBP12.95□□□□□ -0.34
CCDC84-209ENST00000580556 BMS1Q14692 1282 aaKnown RBP12.95□□□□□ -0.34
CCDC84-209ENST00000580556 RTP2Q5QGT7 225 aa12.95□□□□□ -0.34
CCDC84-209ENST00000580556 VARS2Q5ST30 1063 aaKnown RBP12.95□□□□□ -0.34
CCDC84-209ENST00000580556 KLHDC7AQ5VTJ3 777 aa12.95□□□□□ -0.34
CCDC84-209ENST00000580556 KIAA0319Q5VV43 1072 aa12.95□□□□□ -0.34
CCDC84-209ENST00000580556 KIAA1841Q6NSI8 718 aa12.95□□□□□ -0.34
CCDC84-209ENST00000580556 UNC93AQ86WB7 457 aa12.95□□□□□ -0.34
CCDC84-209ENST00000580556 METTL23Q86XA0 190 aa12.95□□□□□ -0.34
CCDC84-209ENST00000580556 ARHGEF19Q8IW93 802 aa12.95□□□□□ -0.34
CCDC84-209ENST00000580556 SIX5Q8N196 739 aa12.95□□□□□ -0.34
CCDC84-209ENST00000580556 VPS52Q8N1B4 723 aa12.95□□□□□ -0.34
CCDC84-209ENST00000580556 UBR7Q8N806 425 aa12.95□□□□□ -0.34
CCDC84-209ENST00000580556 NEK11Q8NG66 645 aa12.95□□□□□ -0.34
CCDC84-209ENST00000580556 KBTBD7Q8WVZ9 684 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms