RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 FGFR1P11362 822 aa13.46□□□□□ -0.25
CDK5RAP3-217ENST00000580287 KCNE1P15382 129 aa13.46□□□□□ -0.25
CDK5RAP3-217ENST00000580287 SELPP16109 830 aa13.46□□□□□ -0.25
CDK5RAP3-217ENST00000580287 AARSP49588 968 aaKnown RBP eCLIP13.46□□□□□ -0.25
CDK5RAP3-217ENST00000580287 FAAP100Q0VG06 881 aa13.46□□□□□ -0.25
CDK5RAP3-217ENST00000580287 NT5DC3Q86UY8 548 aa13.46□□□□□ -0.25
CDK5RAP3-217ENST00000580287 GOLGA6L1Q8N7Z2 621 aa13.46□□□□□ -0.25
CDK5RAP3-217ENST00000580287 C12orf29Q8N999 325 aa13.46□□□□□ -0.25
CDK5RAP3-217ENST00000580287 PPP1R10Q96QC0 940 aaKnown RBP13.46□□□□□ -0.25
CDK5RAP3-217ENST00000580287 ELOVL4Q9GZR5 314 aa13.46□□□□□ -0.25
CDK5RAP3-217ENST00000580287 MED4Q9NPJ6 270 aa13.46□□□□□ -0.25
CDK5RAP3-217ENST00000580287 ATP11BQ9Y2G3 1177 aa13.46□□□□□ -0.25
CDK5RAP3-217ENST00000580287 DAAM1Q9Y4D1 1078 aa13.46□□□□□ -0.25
CDK5RAP3-217ENST00000580287 SCN1AP35498 2009 aa13.46□□□□□ -0.26
CDK5RAP3-217ENST00000580287 ANKRD62A6NC57 917 aa13.45□□□□□ -0.26
CDK5RAP3-217ENST00000580287 PGRMC1O00264 195 aaKnown RBP13.45□□□□□ -0.26
CDK5RAP3-217ENST00000580287 CD19P15391 556 aa13.45□□□□□ -0.26
CDK5RAP3-217ENST00000580287 CLCNKBP51801 687 aa13.45□□□□□ -0.26
CDK5RAP3-217ENST00000580287 NAA35Q5VZE5 725 aa13.45□□□□□ -0.26
CDK5RAP3-217ENST00000580287 ADAT2Q7Z6V5 191 aaKnown RBP13.45□□□□□ -0.26
CDK5RAP3-217ENST00000580287 DEFB128Q7Z7B8 93 aa13.45□□□□□ -0.26
CDK5RAP3-217ENST00000580287 PACS2Q86VP3 889 aa13.45□□□□□ -0.26
CDK5RAP3-217ENST00000580287 IFT20Q8IY31 132 aa13.45□□□□□ -0.26
CDK5RAP3-217ENST00000580287 BCO2Q9BYV7 579 aa13.45□□□□□ -0.26
CDK5RAP3-217ENST00000580287 CRISPLD2Q9H0B8 497 aa13.45□□□□□ -0.26
CDK5RAP3-217ENST00000580287 CNTN6Q9UQ52 1028 aa13.45□□□□□ -0.26
CDK5RAP3-217ENST00000580287 KRIT1O00522 736 aa13.45□□□□□ -0.26
CDK5RAP3-217ENST00000580287 PIRO00625 290 aa13.45□□□□□ -0.26
CDK5RAP3-217ENST00000580287 TLR3O15455 904 aaKnown RBP13.45□□□□□ -0.26
CDK5RAP3-217ENST00000580287 RAD51CO43502 376 aa13.45□□□□□ -0.26
CDK5RAP3-217ENST00000580287 ZNF132P52740 706 aa13.45□□□□□ -0.26
CDK5RAP3-217ENST00000580287 NDST1P52848 882 aa13.45□□□□□ -0.26
CDK5RAP3-217ENST00000580287 RAD23BP54727 409 aa13.45□□□□□ -0.26
CDK5RAP3-217ENST00000580287 CCDC142Q17RM4 750 aa13.45□□□□□ -0.26
CDK5RAP3-217ENST00000580287 C3orf58Q8NDZ4 430 aa13.45□□□□□ -0.26
CDK5RAP3-217ENST00000580287 HASPINQ8TF76 798 aa13.45□□□□□ -0.26
CDK5RAP3-217ENST00000580287 RPS6KC1Q96S38 1066 aa13.45□□□□□ -0.26
CDK5RAP3-217ENST00000580287 I3L4J1 428 aa13.44□□□□□ -0.26
CDK5RAP3-217ENST00000580287 THP07101 528 aa13.44□□□□□ -0.26
CDK5RAP3-217ENST00000580287 PDGFRBP09619 1106 aa13.44□□□□□ -0.26
CDK5RAP3-217ENST00000580287 ATICP31939 592 aa13.44□□□□□ -0.26
CDK5RAP3-217ENST00000580287 EPHB4P54760 987 aa13.44□□□□□ -0.26
CDK5RAP3-217ENST00000580287 MYO1EQ12965 1108 aa13.44□□□□□ -0.26
CDK5RAP3-217ENST00000580287 SOWAHAQ2M3V2 549 aa13.44□□□□□ -0.26
CDK5RAP3-217ENST00000580287 TTC31Q49AM3 519 aaPredicted RBP13.44□□□□□ -0.26
CDK5RAP3-217ENST00000580287 GLE1Q53GS7 698 aaKnown RBP13.44□□□□□ -0.26
CDK5RAP3-217ENST00000580287 ECHDC2Q86YB7 292 aa13.44□□□□□ -0.26
CDK5RAP3-217ENST00000580287 NT5DC4Q86YG4 428 aa13.44□□□□□ -0.26
CDK5RAP3-217ENST00000580287 DDX47Q9H0S4 455 aaKnown RBP13.44□□□□□ -0.26
CDK5RAP3-217ENST00000580287 HIPK3Q9H422 1215 aa13.44□□□□□ -0.26
CDK5RAP3-217ENST00000580287 VIPAS39Q9H9C1 493 aa13.44□□□□□ -0.26
CDK5RAP3-217ENST00000580287 RSAD1Q9HA92 442 aa13.44□□□□□ -0.26
CDK5RAP3-217ENST00000580287 COG5Q9UP83 839 aa13.44□□□□□ -0.26
CDK5RAP3-217ENST00000580287 DERAQ9Y315 318 aa13.44□□□□□ -0.26
CDK5RAP3-217ENST00000580287 TIMM13Q9Y5L4 95 aaPredicted RBP13.44□□□□□ -0.26
CDK5RAP3-217ENST00000580287 TET1Q8NFU7 2136 aa13.44□□□□□ -0.26
CDK5RAP3-217ENST00000580287 NCANO14594 1321 aa13.44□□□□□ -0.26
CDK5RAP3-217ENST00000580287 FRMPD3Q5JV73 1810 aa13.44□□□□□ -0.26
CDK5RAP3-217ENST00000580287 GOLGA6CA6NDK9 693 aa13.44□□□□□ -0.26
CDK5RAP3-217ENST00000580287 B4GALT3O60512 393 aa13.44□□□□□ -0.26
CDK5RAP3-217ENST00000580287 RPLP2P05387 115 aaKnown RBP13.44□□□□□ -0.26
CDK5RAP3-217ENST00000580287 GOLGA6DP0CG33 693 aa13.44□□□□□ -0.26
CDK5RAP3-217ENST00000580287 LMO2P25791 158 aa13.44□□□□□ -0.26
CDK5RAP3-217ENST00000580287 SLFN11Q7Z7L1 901 aa13.44□□□□□ -0.26
CDK5RAP3-217ENST00000580287 SLC4A11Q8NBS3 891 aa13.44□□□□□ -0.26
CDK5RAP3-217ENST00000580287 CASKIN2Q8WXE0 1202 aa13.44□□□□□ -0.26
CDK5RAP3-217ENST00000580287 BTBD6Q96KE9 485 aa13.44□□□□□ -0.26
CDK5RAP3-217ENST00000580287 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.44□□□□□ -0.264e-16■□□□□ 11
CDK5RAP3-217ENST00000580287 WNT8AQ9H1J5 351 aa13.44□□□□□ -0.26
CDK5RAP3-217ENST00000580287 TSPYL2Q9H2G4 693 aaPredicted RBP13.44□□□□□ -0.26
CDK5RAP3-217ENST00000580287 GOLGA6AQ9NYA3 693 aa13.44□□□□□ -0.26
CDK5RAP3-217ENST00000580287 KPNA7A9QM74 516 aa13.43□□□□□ -0.26
CDK5RAP3-217ENST00000580287 CILPO75339 1184 aa13.43□□□□□ -0.26
CDK5RAP3-217ENST00000580287 GJB6O95452 261 aa13.43□□□□□ -0.26
CDK5RAP3-217ENST00000580287 GATMP50440 423 aa13.43□□□□□ -0.26
CDK5RAP3-217ENST00000580287 ATP1A2P50993 1020 aa13.43□□□□□ -0.26
CDK5RAP3-217ENST00000580287 CORO7P57737 925 aa13.43□□□□□ -0.26
CDK5RAP3-217ENST00000580287 LILRA4P59901 499 aa13.43□□□□□ -0.26
CDK5RAP3-217ENST00000580287 ZNF211Q13398 564 aaPredicted RBP13.43□□□□□ -0.26
CDK5RAP3-217ENST00000580287 HLTFQ14527 1009 aaKnown RBP eCLIP13.43□□□□□ -0.26
CDK5RAP3-217ENST00000580287 TTMPQ5BVD1 217 aa13.43□□□□□ -0.26
CDK5RAP3-217ENST00000580287 ICE2Q659A1 982 aa13.43□□□□□ -0.26
CDK5RAP3-217ENST00000580287 MRPL10Q7Z7H8 261 aaKnown RBP13.43□□□□□ -0.26
CDK5RAP3-217ENST00000580287 FAM81BQ96LP2 452 aa13.43□□□□□ -0.26
CDK5RAP3-217ENST00000580287 ISCUQ9H1K1 167 aa13.43□□□□□ -0.26
CDK5RAP3-217ENST00000580287 DPEP3Q9H4B8 488 aa13.43□□□□□ -0.26
CDK5RAP3-217ENST00000580287 VRTNQ9H8Y1 702 aa13.43□□□□□ -0.26
CDK5RAP3-217ENST00000580287 C9IYK1 514 aa13.43□□□□□ -0.26
CDK5RAP3-217ENST00000580287 ZNF623O75123 536 aa13.43□□□□□ -0.26
CDK5RAP3-217ENST00000580287 FGGP02679 453 aa13.43□□□□□ -0.26
CDK5RAP3-217ENST00000580287 UNGP13051 313 aaPredicted RBP13.43□□□□□ -0.26
CDK5RAP3-217ENST00000580287 MESDQ14696 234 aa13.43□□□□□ -0.26
CDK5RAP3-217ENST00000580287 CLEC16AQ2KHT3 1053 aa13.43□□□□□ -0.26
CDK5RAP3-217ENST00000580287 ACOT1Q86TX2 421 aa13.43□□□□□ -0.26
CDK5RAP3-217ENST00000580287 CPNE8Q86YQ8 564 aa13.43□□□□□ -0.26
CDK5RAP3-217ENST00000580287 ACTRT1Q8TDG2 376 aa13.43□□□□□ -0.26
CDK5RAP3-217ENST00000580287 HEXIM2Q96MH2 286 aaKnown RBP13.43□□□□□ -0.26
CDK5RAP3-217ENST00000580287 ZIM3Q96PE6 472 aa13.43□□□□□ -0.26
CDK5RAP3-217ENST00000580287 TRIM7Q9C029 511 aa13.43□□□□□ -0.26
CDK5RAP3-217ENST00000580287 HCSTQ9UBK5 93 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms