RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 FAM228AQ86W67 206 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 NLGN2Q8NFZ4 835 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 TWNKQ96RR1 684 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 KLF6Q99612 283 aaPredicted RBP11.05□□□□□ -0.64
TOP3A-209ENST00000580095 ELP3Q9H9T3 547 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 TXNRD2Q9NNW7 524 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 SLCO1B3Q9NPD5 702 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 PDGFCQ9NRA1 345 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 GINM1Q9NU53 330 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 TPX2Q9ULW0 747 aaKnown RBP11.05□□□□□ -0.64
TOP3A-209ENST00000580095 RLFQ13129 1914 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 IGKV6D-21A0A0A0MT36 114 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 A0A1W2PPM1 405 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 ZBTB42B2RXF5 422 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 MAFO75444 373 aaPredicted RBP11.05□□□□□ -0.64
TOP3A-209ENST00000580095 GRAP2O75791 330 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 GCAP28676 217 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 MAN1A1P33908 653 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 ASPAP45381 313 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 PDIA2Q13087 525 aaKnown RBP11.05□□□□□ -0.64
TOP3A-209ENST00000580095 PARP9Q8IXQ6 854 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 RCOR2Q8IZ40 523 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 TMEM35BQ8NCS4 154 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.05□□□□□ -0.64
TOP3A-209ENST00000580095 SEPT1Q8WYJ6 367 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 HSPH1Q92598 858 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 CPXM1Q96SM3 734 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 SPATC1LQ9H0A9 340 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 XYLT2Q9H1B5 865 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 SMYD3Q9H7B4 428 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 SYNCQ9H7C4 482 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 ACTR5Q9H9F9 607 aaPredicted RBP11.05□□□□□ -0.64
TOP3A-209ENST00000580095 BAIAP2L1Q9UHR4 511 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 SSC5DA1L4H1 1573 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 WDR81Q562E7 1941 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 hCG_1818297A0A087WSY0 165 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 TCRBV7S3A2A0A539 114 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 GOLGA8RI6L899 631 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 TJP3O95049 919 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 NFICP08651 508 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 HOXC6P09630 235 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 KRT15P19012 456 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 CDKN2BP42772 138 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 WDR4P57081 412 aaKnown RBP11.05□□□□□ -0.64
TOP3A-209ENST00000580095 DNAJC3Q13217 504 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 Q3C1V9 767 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 MSS51Q4VC12 460 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 CGB2Q6NT52 195 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 SYDE1Q6ZW31 735 aaPredicted RBP11.05□□□□□ -0.64
TOP3A-209ENST00000580095 WDR49Q8IV35 697 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 ZCCHC9Q8N567 271 aaKnown RBP11.05□□□□□ -0.64
TOP3A-209ENST00000580095 DNERQ8NFT8 737 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 UBA3Q8TBC4 463 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 ACTL9Q8TC94 416 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 SDCBP2Q9H190 292 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 KDM4CQ9H3R0 1056 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 CNTN6Q9UQ52 1028 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 USP15Q9Y4E8 981 aaPredicted RBP11.05□□□□□ -0.64
TOP3A-209ENST00000580095 OGTO15294 1046 aa11.04□□□□□ -0.64
TOP3A-209ENST00000580095 CST8O60676 142 aa11.04□□□□□ -0.64
TOP3A-209ENST00000580095 CDH16O75309 829 aa11.04□□□□□ -0.64
TOP3A-209ENST00000580095 STAM2O75886 525 aa11.04□□□□□ -0.64
TOP3A-209ENST00000580095 SSTR1P30872 391 aa11.04□□□□□ -0.64
TOP3A-209ENST00000580095 ICAM3P32942 547 aa11.04□□□□□ -0.64
TOP3A-209ENST00000580095 PSMC1P62191 440 aaKnown RBP11.04□□□□□ -0.64
TOP3A-209ENST00000580095 OTUD4Q01804 1114 aaKnown RBP11.04□□□□□ -0.64
TOP3A-209ENST00000580095 TFDP3Q5H9I0 405 aa11.04□□□□□ -0.64
TOP3A-209ENST00000580095 DNAJC14Q6Y2X3 702 aaPredicted RBP11.04□□□□□ -0.64
TOP3A-209ENST00000580095 APOBEC3FQ8IUX4 373 aaKnown RBP11.04□□□□□ -0.64
TOP3A-209ENST00000580095 ALLCQ8N6M5 410 aa11.04□□□□□ -0.64
TOP3A-209ENST00000580095 CPB2Q96IY4 423 aa11.04□□□□□ -0.64
TOP3A-209ENST00000580095 VCPIP1Q96JH7 1222 aa11.04□□□□□ -0.64
TOP3A-209ENST00000580095 SPATA33Q96N06 139 aa11.04□□□□□ -0.64
TOP3A-209ENST00000580095 ASCC2Q9H1I8 757 aaPredicted RBP11.04□□□□□ -0.64
TOP3A-209ENST00000580095 NKIRAS1Q9NYS0 192 aa11.04□□□□□ -0.64
TOP3A-209ENST00000580095 PHIPQ8WWQ0 1821 aa11.04□□□□□ -0.64
TOP3A-209ENST00000580095 TCRBV5S1A1TA0A578 114 aa11.04□□□□□ -0.64
TOP3A-209ENST00000580095 WDR91A4D1P6 747 aa11.04□□□□□ -0.64
TOP3A-209ENST00000580095 KRT3P12035 628 aa11.04□□□□□ -0.64
TOP3A-209ENST00000580095 CALRP27797 417 aaKnown RBP11.04□□□□□ -0.64
TOP3A-209ENST00000580095 RFC5P40937 340 aa11.04□□□□□ -0.64
TOP3A-209ENST00000580095 CETN2P41208 172 aa11.04□□□□□ -0.64
TOP3A-209ENST00000580095 MMRN1Q13201 1228 aa11.04□□□□□ -0.64
TOP3A-209ENST00000580095 LACTB2Q53H82 288 aaPredicted RBP11.04□□□□□ -0.64
TOP3A-209ENST00000580095 FAM160B1Q5W0V3 765 aa11.04□□□□□ -0.64
TOP3A-209ENST00000580095 METTL7BQ6UX53 244 aa11.04□□□□□ -0.64
TOP3A-209ENST00000580095 CROCCP2Q86T23 111 aa11.04□□□□□ -0.64
TOP3A-209ENST00000580095 CCDC33Q8N5R6 958 aa11.04□□□□□ -0.64
TOP3A-209ENST00000580095 UBR7Q8N806 425 aa11.04□□□□□ -0.64
TOP3A-209ENST00000580095 CHST13Q8NET6 341 aa11.04□□□□□ -0.64
TOP3A-209ENST00000580095 CKAP2Q8WWK9 683 aa11.04□□□□□ -0.64
TOP3A-209ENST00000580095 RBM41Q96IZ5 413 aaKnown RBP11.04□□□□□ -0.64
TOP3A-209ENST00000580095 CALN1Q9BXU9 219 aa11.04□□□□□ -0.64
TOP3A-209ENST00000580095 ALG13Q9NP73 1137 aaKnown RBP11.04□□□□□ -0.64
TOP3A-209ENST00000580095 METTL5Q9NRN9 209 aaKnown RBP11.04□□□□□ -0.64
TOP3A-209ENST00000580095 GPRC5DQ9NZD1 345 aa11.04□□□□□ -0.64
TOP3A-209ENST00000580095 CPSF3Q9UKF6 684 aaKnown RBP11.04□□□□□ -0.64
TOP3A-209ENST00000580095 GRID1Q9ULK0 1009 aa11.04□□□□□ -0.64
TOP3A-209ENST00000580095 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.04□□□□□ -0.64
TOP3A-209ENST00000580095 A8MUI8 341 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms