RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 DDX43Q9NXZ2 648 aaKnown RBP12.4□□□□□ -0.42
SSH2-208ENST00000579040 CGNQ9P2M7 1197 aaKnown RBP12.4□□□□□ -0.42
SSH2-208ENST00000579040 SNX9Q9Y5X1 595 aa12.4□□□□□ -0.42
SSH2-208ENST00000579040 PIAS3Q9Y6X2 628 aa12.4□□□□□ -0.42
SSH2-208ENST00000579040 HELZP42694 1942 aaKnown RBP12.39□□□□□ -0.43
SSH2-208ENST00000579040 GABRDO14764 452 aa12.39□□□□□ -0.43
SSH2-208ENST00000579040 PRPF40AO75400 957 aaKnown RBP12.39□□□□□ -0.43
SSH2-208ENST00000579040 CSH1P0DML2 217 aa12.39□□□□□ -0.43
SSH2-208ENST00000579040 CSH2P0DML3 217 aa12.39□□□□□ -0.43
SSH2-208ENST00000579040 DDX6P26196 483 aaKnown RBP eCLIP12.39□□□□□ -0.43
SSH2-208ENST00000579040 RPL10AP62906 217 aaKnown RBP12.39□□□□□ -0.43
SSH2-208ENST00000579040 PLCB2Q00722 1185 aa12.39□□□□□ -0.43
SSH2-208ENST00000579040 FZD5Q13467 585 aa12.39□□□□□ -0.43
SSH2-208ENST00000579040 SNRNP35Q16560 246 aaKnown RBP12.39□□□□□ -0.43
SSH2-208ENST00000579040 BMT2Q1RMZ1 405 aa12.39□□□□□ -0.43
SSH2-208ENST00000579040 FOXD4L6Q3SYB3 417 aaPredicted RBP12.39□□□□□ -0.43
SSH2-208ENST00000579040 ARHGAP29Q52LW3 1261 aa12.39□□□□□ -0.43
SSH2-208ENST00000579040 FOXD4L3Q6VB84 417 aaPredicted RBP12.39□□□□□ -0.43
SSH2-208ENST00000579040 MAMSTRQ6ZN01 415 aa12.39□□□□□ -0.43
SSH2-208ENST00000579040 HS2ST1Q7LGA3 356 aa12.39□□□□□ -0.43
SSH2-208ENST00000579040 LIMS2Q7Z4I7 341 aa12.39□□□□□ -0.43
SSH2-208ENST00000579040 ADSSL1Q8N142 457 aa12.39□□□□□ -0.43
SSH2-208ENST00000579040 ZNF687Q8N1G0 1237 aa12.39□□□□□ -0.43
SSH2-208ENST00000579040 CSGALNACT1Q8TDX6 532 aa12.39□□□□□ -0.43
SSH2-208ENST00000579040 FAM3CQ92520 227 aa12.39□□□□□ -0.43
SSH2-208ENST00000579040 RSPRY1Q96DX4 576 aa12.39□□□□□ -0.43
SSH2-208ENST00000579040 FUBP3Q96I24 572 aaKnown RBP eCLIP12.39□□□□□ -0.43
SSH2-208ENST00000579040 HPDLQ96IR7 371 aa12.39□□□□□ -0.43
SSH2-208ENST00000579040 PKMYT1Q99640 499 aa12.39□□□□□ -0.43
SSH2-208ENST00000579040 CHRDQ9H2X0 955 aa12.39□□□□□ -0.43
SSH2-208ENST00000579040 C8orf33Q9H7E9 229 aaPredicted RBP12.39□□□□□ -0.43
SSH2-208ENST00000579040 TMLHEQ9NVH6 421 aa12.39□□□□□ -0.43
SSH2-208ENST00000579040 RCOR1Q9UKL0 485 aa12.39□□□□□ -0.43
SSH2-208ENST00000579040 R4GN57 208 aa12.39□□□□□ -0.43
SSH2-208ENST00000579040 ZNF292O60281 2723 aa12.39□□□□□ -0.43
SSH2-208ENST00000579040 PTPRJQ12913 1337 aa12.38□□□□□ -0.43
SSH2-208ENST00000579040 VPS13AQ96RL7 3174 aa12.38□□□□□ -0.43
SSH2-208ENST00000579040 TGFB1I1O43294 461 aa12.38□□□□□ -0.43
SSH2-208ENST00000579040 PRAMEF12O95522 483 aa12.38□□□□□ -0.43
SSH2-208ENST00000579040 SLFN14P0C7P3 912 aa12.38□□□□□ -0.43
SSH2-208ENST00000579040 HMGA1P17096 107 aaKnown RBP12.38□□□□□ -0.43
SSH2-208ENST00000579040 NLRP12P59046 1061 aa12.38□□□□□ -0.43
SSH2-208ENST00000579040 CYP4F8P98187 520 aa12.38□□□□□ -0.43
SSH2-208ENST00000579040 DNM1Q05193 864 aaKnown RBP12.38□□□□□ -0.43
SSH2-208ENST00000579040 PKP1Q13835 747 aa12.38□□□□□ -0.43
SSH2-208ENST00000579040 PSMD6Q15008 389 aa12.38□□□□□ -0.43
SSH2-208ENST00000579040 SOWAHAQ2M3V2 549 aa12.38□□□□□ -0.43
SSH2-208ENST00000579040 CFAP221Q4G0U5 840 aa12.38□□□□□ -0.43
SSH2-208ENST00000579040 LMBRD2Q68DH5 695 aaPredicted RBP12.38□□□□□ -0.43
SSH2-208ENST00000579040 C12orf56Q8IXR9 622 aa12.38□□□□□ -0.43
SSH2-208ENST00000579040 CEP57L1Q8IYX8 460 aa12.38□□□□□ -0.43
SSH2-208ENST00000579040 XXYLT1Q8NBI6 393 aa12.38□□□□□ -0.43
SSH2-208ENST00000579040 OR5B17Q8NGF7 314 aa12.38□□□□□ -0.43
SSH2-208ENST00000579040 BPIFB1Q8TDL5 484 aa12.38□□□□□ -0.43
SSH2-208ENST00000579040 GIPC2Q8TF65 315 aa12.38□□□□□ -0.43
SSH2-208ENST00000579040 SCFD1Q8WVM8 642 aa12.38□□□□□ -0.43
SSH2-208ENST00000579040 TRMT2BQ96GJ1 504 aaKnown RBP12.38□□□□□ -0.43
SSH2-208ENST00000579040 FAM84AQ96KN4 292 aa12.38□□□□□ -0.43
SSH2-208ENST00000579040 FNBP1Q96RU3 617 aa12.38□□□□□ -0.43
SSH2-208ENST00000579040 CGRRF1Q99675 332 aa12.38□□□□□ -0.43
SSH2-208ENST00000579040 PI4K2AQ9BTU6 479 aa12.38□□□□□ -0.43
SSH2-208ENST00000579040 FAM126AQ9BYI3 521 aaPredicted RBP12.38□□□□□ -0.43
SSH2-208ENST00000579040 PRMT8Q9NR22 394 aaPredicted RBP12.38□□□□□ -0.43
SSH2-208ENST00000579040 UXTQ9UBK9 157 aaPredicted RBP12.38□□□□□ -0.43
SSH2-208ENST00000579040 NDRG2Q9UN36 371 aaKnown RBP12.38□□□□□ -0.43
SSH2-208ENST00000579040 PCDHGA2Q9Y5H1 932 aa12.38□□□□□ -0.43
SSH2-208ENST00000579040 USP34Q70CQ2 3546 aa12.37□□□□□ -0.43
SSH2-208ENST00000579040 KINO60870 393 aaKnown RBP12.37□□□□□ -0.43
SSH2-208ENST00000579040 F11P03951 625 aa12.37□□□□□ -0.43
SSH2-208ENST00000579040 ACAT1P24752 427 aaKnown RBP12.37□□□□□ -0.43
SSH2-208ENST00000579040 CCNE1P24864 410 aa12.37□□□□□ -0.43
SSH2-208ENST00000579040 MAGEA11P43364 429 aa12.37□□□□□ -0.43
SSH2-208ENST00000579040 CYP2J2P51589 502 aa12.37□□□□□ -0.43
SSH2-208ENST00000579040 CSTF1Q05048 431 aaKnown RBP12.37□□□□□ -0.43
SSH2-208ENST00000579040 CYP24A1Q07973 514 aa12.37□□□□□ -0.43
SSH2-208ENST00000579040 PPP2R5DQ14738 602 aa12.37□□□□□ -0.43
SSH2-208ENST00000579040 MAPRE1Q15691 268 aaKnown RBP12.37□□□□□ -0.43
SSH2-208ENST00000579040 SCARA3Q6AZY7 606 aa12.37□□□□□ -0.43
SSH2-208ENST00000579040 FAM171BQ6P995 826 aa12.37□□□□□ -0.43
SSH2-208ENST00000579040 C4orf50Q6ZRC1 276 aa12.37□□□□□ -0.43
SSH2-208ENST00000579040 TMEM150AQ86TG1 271 aa12.37□□□□□ -0.43
SSH2-208ENST00000579040 OSTM1Q86WC4 334 aa12.37□□□□□ -0.43
SSH2-208ENST00000579040 RALGPS2Q86X27 583 aaPredicted RBP12.37□□□□□ -0.43
SSH2-208ENST00000579040 SPATA2LQ8IUW3 424 aaPredicted RBP12.37□□□□□ -0.43
SSH2-208ENST00000579040 NELFCDQ8IXH7 590 aa12.37□□□□□ -0.43
SSH2-208ENST00000579040 CMTM8Q8IZV2 173 aa12.37□□□□□ -0.43
SSH2-208ENST00000579040 CELF5Q8N6W0 485 aaKnown RBP12.37□□□□□ -0.43
SSH2-208ENST00000579040 GOLGA5Q8TBA6 731 aa12.37□□□□□ -0.43
SSH2-208ENST00000579040 MRPS31Q92665 395 aaKnown RBP12.37□□□□□ -0.43
SSH2-208ENST00000579040 NELL1Q92832 810 aa12.37□□□□□ -0.43
SSH2-208ENST00000579040 CEP295NLQ96MC4 621 aa12.37□□□□□ -0.43
SSH2-208ENST00000579040 SLC46A2Q9BY10 475 aa12.37□□□□□ -0.43
SSH2-208ENST00000579040 BLZF1Q9H2G9 400 aa12.37□□□□□ -0.43
SSH2-208ENST00000579040 KIF9Q9HAQ2 790 aa12.37□□□□□ -0.43
SSH2-208ENST00000579040 THG1LQ9NWX6 298 aaKnown RBP12.37□□□□□ -0.43
SSH2-208ENST00000579040 ZSCAN32Q9NX65 697 aa12.37□□□□□ -0.43
SSH2-208ENST00000579040 USP25Q9UHP3 1055 aa12.37□□□□□ -0.43
SSH2-208ENST00000579040 GTF3C4Q9UKN8 822 aa12.37□□□□□ -0.43
SSH2-208ENST00000579040 CDH9Q9ULB4 789 aa12.37□□□□□ -0.43
SSH2-208ENST00000579040 CFAP54Q96N23 3096 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms