RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 HAPLN1P10915 354 aaPredicted RBP7□□□□□ -1.29
TRAF4-213ENST00000578917 GJA1P17302 382 aa7□□□□□ -1.29
TRAF4-213ENST00000578917 CEBPBP17676 345 aa7□□□□□ -1.29
TRAF4-213ENST00000578917 PTPN1P18031 435 aaKnown RBP7□□□□□ -1.29
TRAF4-213ENST00000578917 WARSP23381 471 aaKnown RBP7□□□□□ -1.29
TRAF4-213ENST00000578917 GABRR2P28476 465 aa7□□□□□ -1.29
TRAF4-213ENST00000578917 GTF2H1P32780 548 aa7□□□□□ -1.29
TRAF4-213ENST00000578917 CDH8P55286 799 aa7□□□□□ -1.29
TRAF4-213ENST00000578917 PSMC1P62191 440 aaKnown RBP7□□□□□ -1.29
TRAF4-213ENST00000578917 CLDN10P78369 228 aa7□□□□□ -1.29
TRAF4-213ENST00000578917 LRRC63Q05C16 580 aa7□□□□□ -1.29
TRAF4-213ENST00000578917 CETN1Q12798 172 aa7□□□□□ -1.29
TRAF4-213ENST00000578917 HTR4Q13639 388 aa7□□□□□ -1.29
TRAF4-213ENST00000578917 TEAD2Q15562 447 aa7□□□□□ -1.29
TRAF4-213ENST00000578917 NFIL3Q16649 462 aa7□□□□□ -1.29
TRAF4-213ENST00000578917 TPD52L1Q16890 204 aaPredicted RBP7□□□□□ -1.29
TRAF4-213ENST00000578917 SLC5A9Q2M3M2 681 aa7□□□□□ -1.29
TRAF4-213ENST00000578917 CCDC40Q4G0X9 1142 aa7□□□□□ -1.29
TRAF4-213ENST00000578917 MDH1BQ5I0G3 518 aa7□□□□□ -1.29
TRAF4-213ENST00000578917 INTS6LQ5JSJ4 861 aaKnown RBP7□□□□□ -1.29
TRAF4-213ENST00000578917 FAM78AQ5JUQ0 283 aa7□□□□□ -1.29
TRAF4-213ENST00000578917 GPR158Q5T848 1215 aa7□□□□□ -1.29
TRAF4-213ENST00000578917 SDHAF4Q5VUM1 108 aa7□□□□□ -1.29
TRAF4-213ENST00000578917 HFE2Q6ZVN8 426 aa7□□□□□ -1.29
TRAF4-213ENST00000578917 OSTM1Q86WC4 334 aa7□□□□□ -1.29
TRAF4-213ENST00000578917 GPIHBP1Q8IV16 184 aa7□□□□□ -1.29
TRAF4-213ENST00000578917 NPAS3Q8IXF0 933 aa7□□□□□ -1.29
TRAF4-213ENST00000578917 SIX5Q8N196 739 aa7□□□□□ -1.29
TRAF4-213ENST00000578917 TTC9BQ8N6N2 239 aa7□□□□□ -1.29
TRAF4-213ENST00000578917 CXorf38Q8TB03 319 aa7□□□□□ -1.29
TRAF4-213ENST00000578917 PLEKHO2Q8TD55 490 aa7□□□□□ -1.29
TRAF4-213ENST00000578917 NELFBQ8WX92 580 aa7□□□□□ -1.29
TRAF4-213ENST00000578917 FGF14Q92915 247 aa7□□□□□ -1.29
TRAF4-213ENST00000578917 PSMG2Q969U7 264 aa7□□□□□ -1.29
TRAF4-213ENST00000578917 ELMO3Q96BJ8 720 aa7□□□□□ -1.29
TRAF4-213ENST00000578917 TNIP3Q96KP6 325 aa7□□□□□ -1.29
TRAF4-213ENST00000578917 IPO9Q96P70 1041 aaKnown RBP7□□□□□ -1.29
TRAF4-213ENST00000578917 KXD1Q9BQD3 176 aa7□□□□□ -1.29
TRAF4-213ENST00000578917 LPIN3Q9BQK8 851 aa7□□□□□ -1.29
TRAF4-213ENST00000578917 MRPL45Q9BRJ2 306 aaKnown RBP7□□□□□ -1.29
TRAF4-213ENST00000578917 CRISPLD1Q9H336 500 aa7□□□□□ -1.29
TRAF4-213ENST00000578917 SMOC2Q9H3U7 446 aa7□□□□□ -1.29
TRAF4-213ENST00000578917 ZFP14Q9HCL3 533 aa7□□□□□ -1.29
TRAF4-213ENST00000578917 ABCB6Q9NP58 842 aa7□□□□□ -1.29
TRAF4-213ENST00000578917 AVENQ9NQS1 362 aaPredicted RBP7□□□□□ -1.29
TRAF4-213ENST00000578917 TMLHEQ9NVH6 421 aa7□□□□□ -1.29
TRAF4-213ENST00000578917 MAN1B1Q9UKM7 699 aa7□□□□□ -1.29
TRAF4-213ENST00000578917 WDR87Q6ZQQ6 2873 aa7□□□□□ -1.29
TRAF4-213ENST00000578917 MYH11P35749 1972 aa7□□□□□ -1.29
TRAF4-213ENST00000578917 TDRD15B5MCY1 1934 aaKnown RBP6.99□□□□□ -1.29
TRAF4-213ENST00000578917 ANHXE9PGG2 379 aa6.99□□□□□ -1.29
TRAF4-213ENST00000578917 GABRDO14764 452 aa6.99□□□□□ -1.29
TRAF4-213ENST00000578917 SLC16A3O15427 465 aaKnown RBP6.99□□□□□ -1.29
TRAF4-213ENST00000578917 HCRTO43612 131 aa6.99□□□□□ -1.29
TRAF4-213ENST00000578917 NARSO43776 548 aaKnown RBP6.99□□□□□ -1.29
TRAF4-213ENST00000578917 PAPLNO95428 1278 aa6.99□□□□□ -1.29
TRAF4-213ENST00000578917 VNN1O95497 513 aa6.99□□□□□ -1.29
TRAF4-213ENST00000578917 VNN2O95498 520 aa6.99□□□□□ -1.29
TRAF4-213ENST00000578917 ABL1P00519 1130 aa6.99□□□□□ -1.29
TRAF4-213ENST00000578917 CSH1P0DML2 217 aa6.99□□□□□ -1.29
TRAF4-213ENST00000578917 CSH2P0DML3 217 aa6.99□□□□□ -1.29
TRAF4-213ENST00000578917 SRFP11831 508 aa6.99□□□□□ -1.29
TRAF4-213ENST00000578917 CD58P19256 250 aa6.99□□□□□ -1.29
TRAF4-213ENST00000578917 BDNFP23560 247 aa6.99□□□□□ -1.29
TRAF4-213ENST00000578917 CCNE1P24864 410 aa6.99□□□□□ -1.29
TRAF4-213ENST00000578917 CDC25CP30307 473 aa6.99□□□□□ -1.29
TRAF4-213ENST00000578917 AVPR1AP37288 418 aa6.99□□□□□ -1.29
TRAF4-213ENST00000578917 VIPR2P41587 438 aa6.99□□□□□ -1.29
TRAF4-213ENST00000578917 CCR2P41597 374 aa6.99□□□□□ -1.29
TRAF4-213ENST00000578917 RAP1GAPP47736 663 aa6.99□□□□□ -1.29
TRAF4-213ENST00000578917 STX17P56962 302 aa6.99□□□□□ -1.29
TRAF4-213ENST00000578917 GPC5P78333 572 aa6.99□□□□□ -1.29
TRAF4-213ENST00000578917 PFKPQ01813 784 aa6.99□□□□□ -1.29
TRAF4-213ENST00000578917 PPP3CAQ08209 521 aa6.99□□□□□ -1.29
TRAF4-213ENST00000578917 PAK1Q13153 545 aa6.99□□□□□ -1.29
TRAF4-213ENST00000578917 MORC3Q14149 939 aa6.99□□□□□ -1.29
TRAF4-213ENST00000578917 ZACNQ401N2 412 aa6.99□□□□□ -1.29
TRAF4-213ENST00000578917 KRT39Q6A163 491 aa6.99□□□□□ -1.29
TRAF4-213ENST00000578917 TANGO2Q6ICL3 276 aa6.99□□□□□ -1.29
TRAF4-213ENST00000578917 FBXL6Q8N531 539 aa6.99□□□□□ -1.29
TRAF4-213ENST00000578917 FBXL13Q8NEE6 735 aa6.99□□□□□ -1.29
TRAF4-213ENST00000578917 SPATA20Q8TB22 786 aa6.99□□□□□ -1.29
TRAF4-213ENST00000578917 SHKBP1Q8TBC3 707 aa6.99□□□□□ -1.29
TRAF4-213ENST00000578917 ZSCAN18Q8TBC5 510 aaPredicted RBP6.99□□□□□ -1.29
TRAF4-213ENST00000578917 MYCBPAPQ8TBZ2 947 aa6.99□□□□□ -1.29
TRAF4-213ENST00000578917 KBTBD7Q8WVZ9 684 aa6.99□□□□□ -1.29
TRAF4-213ENST00000578917 MRPS31Q92665 395 aaKnown RBP6.99□□□□□ -1.29
TRAF4-213ENST00000578917 SMARCD2Q92925 531 aa6.99□□□□□ -1.29
TRAF4-213ENST00000578917 E2F7Q96AV8 911 aa6.99□□□□□ -1.29
TRAF4-213ENST00000578917 FUBP3Q96I24 572 aaKnown RBP eCLIP6.99□□□□□ -1.29
TRAF4-213ENST00000578917 SHDQ96IW2 340 aa6.99□□□□□ -1.29
TRAF4-213ENST00000578917 MKNK1Q9BUB5 465 aa6.99□□□□□ -1.29
TRAF4-213ENST00000578917 RPP25Q9BUL9 199 aaKnown RBP6.99□□□□□ -1.29
TRAF4-213ENST00000578917 TRMT61BQ9BVS5 477 aaKnown RBP6.99□□□□□ -1.29
TRAF4-213ENST00000578917 XYLT2Q9H1B5 865 aa6.99□□□□□ -1.29
TRAF4-213ENST00000578917 SMYD3Q9H7B4 428 aa6.99□□□□□ -1.29
TRAF4-213ENST00000578917 BRD9Q9H8M2 597 aa6.99□□□□□ -1.29
TRAF4-213ENST00000578917 METTL14Q9HCE5 456 aaKnown RBP6.99□□□□□ -1.29
TRAF4-213ENST00000578917 TMEM8AQ9HCN3 771 aa6.99□□□□□ -1.29
TRAF4-213ENST00000578917 THG1LQ9NWX6 298 aaKnown RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms