RNA–Protein interactions for RNA: ENST00000578861.5

SNX11-205, Transcript of sorting nexin 11, humanhuman

TSL 4

Gene SNX11, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-205ENST00000578861 SLC14A1Q13336 389 aa9.64□□□□□ -0.87
SNX11-205ENST00000578861 CAMK2BQ13554 666 aa9.64□□□□□ -0.87
SNX11-205ENST00000578861 NBR1Q14596 966 aa9.64□□□□□ -0.87
SNX11-205ENST00000578861 ECM1Q16610 540 aa9.64□□□□□ -0.87
SNX11-205ENST00000578861 UPP1Q16831 310 aa9.64□□□□□ -0.87
SNX11-205ENST00000578861 NAIF1Q69YI7 327 aaPredicted RBP9.64□□□□□ -0.87
SNX11-205ENST00000578861 CD300LGQ6UXG3 332 aa9.64□□□□□ -0.87
SNX11-205ENST00000578861 ANKS3Q6ZW76 656 aa9.64□□□□□ -0.87
SNX11-205ENST00000578861 BPIFB1Q8TDL5 484 aa9.64□□□□□ -0.87
SNX11-205ENST00000578861 CHFRQ96EP1 664 aa9.64□□□□□ -0.87
SNX11-205ENST00000578861 DDX27Q96GQ7 796 aaKnown RBP9.64□□□□□ -0.87
SNX11-205ENST00000578861 C8orf76Q96K31 380 aa9.64□□□□□ -0.87
SNX11-205ENST00000578861 PPP1R10Q96QC0 940 aaKnown RBP9.64□□□□□ -0.87
SNX11-205ENST00000578861 FNBP1Q96RU3 617 aa9.64□□□□□ -0.87
SNX11-205ENST00000578861 P2RY13Q9BPV8 354 aa9.64□□□□□ -0.87
SNX11-205ENST00000578861 BHMT2Q9H2M3 363 aa9.64□□□□□ -0.87
SNX11-205ENST00000578861 EBF3Q9H4W6 596 aa9.64□□□□□ -0.87
SNX11-205ENST00000578861 DNAAF2Q9NVR5 837 aaKnown RBP9.64□□□□□ -0.87
SNX11-205ENST00000578861 KIAA1024Q9UPX6 916 aa9.64□□□□□ -0.87
SNX11-205ENST00000578861 COL4A2P08572 1712 aa9.63□□□□□ -0.87
SNX11-205ENST00000578861 SMIM28A0A1B0GU29 152 aa9.63□□□□□ -0.87
SNX11-205ENST00000578861 TRAPPC3O43617 180 aa9.63□□□□□ -0.87
SNX11-205ENST00000578861 TLX3O43711 291 aaPredicted RBP9.63□□□□□ -0.87
SNX11-205ENST00000578861 HARSP12081 509 aaKnown RBP9.63□□□□□ -0.87
SNX11-205ENST00000578861 ATF2P15336 505 aa9.63□□□□□ -0.87
SNX11-205ENST00000578861 YARSP54577 528 aaKnown RBP9.63□□□□□ -0.87
SNX11-205ENST00000578861 SEC13P55735 322 aa9.63□□□□□ -0.87
SNX11-205ENST00000578861 PEX3P56589 373 aa9.63□□□□□ -0.87
SNX11-205ENST00000578861 AMPD2Q01433 879 aa9.63□□□□□ -0.87
SNX11-205ENST00000578861 SOX4Q06945 474 aaPredicted RBP9.63□□□□□ -0.87
SNX11-205ENST00000578861 CCDC173Q0VFZ6 552 aa9.63□□□□□ -0.87
SNX11-205ENST00000578861 RUNX3Q13761 415 aa9.63□□□□□ -0.87
SNX11-205ENST00000578861 GNL2Q13823 731 aaKnown RBP9.63□□□□□ -0.87
SNX11-205ENST00000578861 FBXO43Q4G163 708 aa9.63□□□□□ -0.87
SNX11-205ENST00000578861 TTC38Q5R3I4 469 aa9.63□□□□□ -0.87
SNX11-205ENST00000578861 LMBRD2Q68DH5 695 aaPredicted RBP9.63□□□□□ -0.87
SNX11-205ENST00000578861 TRIM68Q6AZZ1 485 aa9.63□□□□□ -0.87
SNX11-205ENST00000578861 APBB1IPQ7Z5R6 666 aaPredicted RBP9.63□□□□□ -0.87
SNX11-205ENST00000578861 CCDC83Q8IWF9 413 aa9.63□□□□□ -0.87
SNX11-205ENST00000578861 TCEAL8Q8IYN2 117 aa9.63□□□□□ -0.87
SNX11-205ENST00000578861 PGBD3Q8N328 593 aa9.63□□□□□ -0.87
SNX11-205ENST00000578861 CCDC33Q8N5R6 958 aa9.63□□□□□ -0.87
SNX11-205ENST00000578861 CEP120Q8N960 986 aa9.63□□□□□ -0.87
SNX11-205ENST00000578861 LEMD2Q8NC56 503 aa9.63□□□□□ -0.87
SNX11-205ENST00000578861 C3orf58Q8NDZ4 430 aa9.63□□□□□ -0.87
SNX11-205ENST00000578861 MDGA1Q8NFP4 955 aa9.63□□□□□ -0.87
SNX11-205ENST00000578861 BAP1Q92560 729 aa9.63□□□□□ -0.87
SNX11-205ENST00000578861 KIFAP3Q92845 792 aa9.63□□□□□ -0.87
SNX11-205ENST00000578861 UROC1Q96N76 676 aa9.63□□□□□ -0.87
SNX11-205ENST00000578861 CCDC94Q9BW85 323 aaPredicted RBP9.63□□□□□ -0.87
SNX11-205ENST00000578861 SMG9Q9H0W8 520 aaKnown RBP9.63□□□□□ -0.87
SNX11-205ENST00000578861 DDX19AQ9NUU7 478 aaKnown RBP9.63□□□□□ -0.87
SNX11-205ENST00000578861 KIAA1522Q9P206 1035 aaPredicted RBP9.63□□□□□ -0.87
SNX11-205ENST00000578861 BCCIPQ9P287 314 aaKnown RBP eCLIP9.63□□□□□ -0.87
SNX11-205ENST00000578861 LRWD1Q9UFC0 647 aa9.63□□□□□ -0.87
SNX11-205ENST00000578861 HEMK1Q9Y5R4 338 aaPredicted RBP9.63□□□□□ -0.87
SNX11-205ENST00000578861 BACE2Q9Y5Z0 518 aa9.63□□□□□ -0.87
SNX11-205ENST00000578861 KIF26AQ9ULI4 1882 aaPredicted RBP9.63□□□□□ -0.87
SNX11-205ENST00000578861 CREBBPQ92793 2442 aa9.62□□□□□ -0.87
SNX11-205ENST00000578861 UBR5O95071 2799 aaPredicted RBP9.62□□□□□ -0.87
SNX11-205ENST00000578861 OTOL1A6NHN0 477 aaPredicted RBP9.62□□□□□ -0.87
SNX11-205ENST00000578861 TMEM189-UBE2V1I3L0A0 370 aa9.62□□□□□ -0.87
SNX11-205ENST00000578861 PODXLO00592 558 aa9.62□□□□□ -0.87
SNX11-205ENST00000578861 ALDH1A2O94788 518 aa9.62□□□□□ -0.87
SNX11-205ENST00000578861 ABLIM3O94929 683 aa9.62□□□□□ -0.87
SNX11-205ENST00000578861 ADSSP30520 456 aa9.62□□□□□ -0.87
SNX11-205ENST00000578861 GRM5P41594 1212 aa9.62□□□□□ -0.87
SNX11-205ENST00000578861 CCR10P46092 362 aa9.62□□□□□ -0.87
SNX11-205ENST00000578861 PLEKHG6Q3KR16 790 aa9.62□□□□□ -0.87
SNX11-205ENST00000578861 ZNF568Q3ZCX4 644 aa9.62□□□□□ -0.87
SNX11-205ENST00000578861 PREPLQ4J6C6 727 aaPredicted RBP9.62□□□□□ -0.87
SNX11-205ENST00000578861 GPR158Q5T848 1215 aa9.62□□□□□ -0.87
SNX11-205ENST00000578861 HAUS3Q68CZ6 603 aa9.62□□□□□ -0.87
SNX11-205ENST00000578861 C18orf25Q96B23 403 aaPredicted RBP9.62□□□□□ -0.87
SNX11-205ENST00000578861 CNOT6LQ96LI5 555 aaKnown RBP9.62□□□□□ -0.87
SNX11-205ENST00000578861 ZMAT2Q96NC0 199 aaKnown RBP9.62□□□□□ -0.87
SNX11-205ENST00000578861 ACO2Q99798 780 aaKnown RBP9.62□□□□□ -0.87
SNX11-205ENST00000578861 TCHPQ9BT92 498 aa9.62□□□□□ -0.87
SNX11-205ENST00000578861 CDT1Q9H211 546 aa9.62□□□□□ -0.87
SNX11-205ENST00000578861 ATXN3LQ9H3M9 355 aa9.62□□□□□ -0.87
SNX11-205ENST00000578861 CAPN10Q9HC96 672 aa9.62□□□□□ -0.87
SNX11-205ENST00000578861 TOPORSQ9NS56 1045 aaPredicted RBP9.62□□□□□ -0.87
SNX11-205ENST00000578861 PCOLCE2Q9UKZ9 415 aa9.62□□□□□ -0.87
SNX11-205ENST00000578861 TNFSF13BQ9Y275 285 aa9.62□□□□□ -0.87
SNX11-205ENST00000578861 PLXNB3Q9ULL4 1909 aa9.62□□□□□ -0.87
SNX11-205ENST00000578861 ZNF638Q14966 1978 aaKnown RBP9.61□□□□□ -0.87
SNX11-205ENST00000578861 PP2D1A8MPX8 630 aa9.61□□□□□ -0.87
SNX11-205ENST00000578861 E9PMD0 336 aa9.61□□□□□ -0.87
SNX11-205ENST00000578861 HIP1RO75146 1068 aa9.61□□□□□ -0.87
SNX11-205ENST00000578861 PRAMEF12O95522 483 aa9.61□□□□□ -0.87
SNX11-205ENST00000578861 ARSAP15289 507 aa9.61□□□□□ -0.87
SNX11-205ENST00000578861 HOXD12P35452 270 aa9.61□□□□□ -0.87
SNX11-205ENST00000578861 P2RY2P41231 377 aa9.61□□□□□ -0.87
SNX11-205ENST00000578861 NPTX2P47972 431 aa9.61□□□□□ -0.87
SNX11-205ENST00000578861 MCM2P49736 904 aa9.61□□□□□ -0.87
SNX11-205ENST00000578861 FXR2P51116 673 aaKnown RBP eCLIP9.61□□□□□ -0.87
SNX11-205ENST00000578861 RPL6Q02878 288 aaKnown RBP9.61□□□□□ -0.87
SNX11-205ENST00000578861 ALKAL1Q6UXT8 129 aa9.61□□□□□ -0.87
SNX11-205ENST00000578861 RABEPKQ7Z6M1 372 aa9.61□□□□□ -0.87
SNX11-205ENST00000578861 GLRX5Q86SX6 157 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms