RNA–Protein interactions for RNA: ENST00000578706.5

UBB-208, Transcript of ubiquitin B, humanhuman

TSL 3

Gene UBB, Length 500 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-208ENST00000578706 ARID3BQ8IVW6 561 aaPredicted RBP6.83□□□□□ -1.32
UBB-208ENST00000578706 TCEAL8Q8IYN2 117 aa6.83□□□□□ -1.32
UBB-208ENST00000578706 MINDY1Q8N5J2 469 aa6.83□□□□□ -1.32
UBB-208ENST00000578706 CCDC148Q8NFR7 591 aa6.83□□□□□ -1.32
UBB-208ENST00000578706 RPLP0P6Q8NHW5 317 aa6.83□□□□□ -1.32
UBB-208ENST00000578706 ZNF461Q8TAF7 563 aa6.83□□□□□ -1.32
UBB-208ENST00000578706 TBCKQ8TEA7 893 aa6.83□□□□□ -1.32
UBB-208ENST00000578706 E2F7Q96AV8 911 aa6.83□□□□□ -1.32
UBB-208ENST00000578706 ZNF512Q96ME7 567 aaPredicted RBP6.83□□□□□ -1.32
UBB-208ENST00000578706 FCRL3Q96P31 734 aaPredicted RBP6.83□□□□□ -1.32
UBB-208ENST00000578706 MTRQ99707 1265 aa6.83□□□□□ -1.32
UBB-208ENST00000578706 GTPBP2Q9BX10 602 aaKnown RBP6.83□□□□□ -1.32
UBB-208ENST00000578706 NUSAP1Q9BXS6 441 aaKnown RBP6.83□□□□□ -1.32
UBB-208ENST00000578706 GPR88Q9GZN0 384 aa6.83□□□□□ -1.32
UBB-208ENST00000578706 DNAJC25Q9H1X3 360 aa6.83□□□□□ -1.32
UBB-208ENST00000578706 CAPN10Q9HC96 672 aa6.83□□□□□ -1.32
UBB-208ENST00000578706 POLMQ9NP87 494 aaPredicted RBP6.83□□□□□ -1.32
UBB-208ENST00000578706 HPS4Q9NQG7 708 aa6.83□□□□□ -1.32
UBB-208ENST00000578706 TOR4AQ9NXH8 423 aa6.83□□□□□ -1.32
UBB-208ENST00000578706 FAM13BQ9NYF5 915 aa6.83□□□□□ -1.32
UBB-208ENST00000578706 KIAA1468Q9P260 1216 aa6.83□□□□□ -1.32
UBB-208ENST00000578706 PILRBQ9UKJ0 227 aa6.83□□□□□ -1.32
UBB-208ENST00000578706 BOD1L1Q8NFC6 3051 aa6.83□□□□□ -1.32
UBB-208ENST00000578706 CREBBPQ92793 2442 aa6.82□□□□□ -1.32
UBB-208ENST00000578706 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.82□□□□□ -1.32
UBB-208ENST00000578706 BECN2A8MW95 431 aa6.82□□□□□ -1.32
UBB-208ENST00000578706 I3L4J1 428 aa6.82□□□□□ -1.32
UBB-208ENST00000578706 TNFRSF10BO14763 440 aa6.82□□□□□ -1.32
UBB-208ENST00000578706 TLX3O43711 291 aaPredicted RBP6.82□□□□□ -1.32
UBB-208ENST00000578706 OPHN1O60890 802 aa6.82□□□□□ -1.32
UBB-208ENST00000578706 B3GAT3O94766 335 aa6.82□□□□□ -1.32
UBB-208ENST00000578706 TDP2O95551 362 aa6.82□□□□□ -1.32
UBB-208ENST00000578706 NTRK1P04629 796 aa6.82□□□□□ -1.32
UBB-208ENST00000578706 HNRNPLP14866 589 aaKnown RBP eCLIP6.82□□□□□ -1.32
UBB-208ENST00000578706 ATF2P15336 505 aa6.82□□□□□ -1.32
UBB-208ENST00000578706 CDC25BP30305 580 aa6.82□□□□□ -1.32
UBB-208ENST00000578706 TOB1P50616 345 aaPredicted RBP6.82□□□□□ -1.32
UBB-208ENST00000578706 NLRP12P59046 1061 aa6.82□□□□□ -1.32
UBB-208ENST00000578706 NLRP5P59047 1200 aa6.82□□□□□ -1.32
UBB-208ENST00000578706 C1QBPQ07021 282 aaKnown RBP6.82□□□□□ -1.32
UBB-208ENST00000578706 NR5A1Q13285 461 aa6.82□□□□□ -1.32
UBB-208ENST00000578706 HNRNPDQ14103 355 aaKnown RBP6.82□□□□□ -1.32
UBB-208ENST00000578706 IQCB1Q15051 598 aa6.82□□□□□ -1.32
UBB-208ENST00000578706 ARHGAP29Q52LW3 1261 aa6.82□□□□□ -1.32
UBB-208ENST00000578706 XKR9Q5GH70 373 aa6.82□□□□□ -1.32
UBB-208ENST00000578706 GALNT17Q6IS24 598 aa6.82□□□□□ -1.32
UBB-208ENST00000578706 SLC8B1Q6J4K2 584 aa6.82□□□□□ -1.32
UBB-208ENST00000578706 SHC4Q6S5L8 630 aa6.82□□□□□ -1.32
UBB-208ENST00000578706 SARM1Q6SZW1 724 aa6.82□□□□□ -1.32
UBB-208ENST00000578706 CDR2LQ86X02 465 aaPredicted RBP6.82□□□□□ -1.32
UBB-208ENST00000578706 TMC8Q8IU68 726 aa6.82□□□□□ -1.32
UBB-208ENST00000578706 SYT12Q8IV01 421 aa6.82□□□□□ -1.32
UBB-208ENST00000578706 C4orf19Q8IY42 314 aa6.82□□□□□ -1.32
UBB-208ENST00000578706 ELMOD1Q8N336 334 aa6.82□□□□□ -1.32
UBB-208ENST00000578706 HDDC3Q8N4P3 179 aa6.82□□□□□ -1.32
UBB-208ENST00000578706 LEMD2Q8NC56 503 aa6.82□□□□□ -1.32
UBB-208ENST00000578706 C3orf58Q8NDZ4 430 aa6.82□□□□□ -1.32
UBB-208ENST00000578706 MDGA1Q8NFP4 955 aa6.82□□□□□ -1.32
UBB-208ENST00000578706 OLIG1Q8TAK6 271 aa6.82□□□□□ -1.32
UBB-208ENST00000578706 TNFRSF25Q93038 417 aa6.82□□□□□ -1.32
UBB-208ENST00000578706 CCDC34Q96HJ3 373 aa6.82□□□□□ -1.32
UBB-208ENST00000578706 POLR3CQ9BUI4 534 aaPredicted RBP6.82□□□□□ -1.32
UBB-208ENST00000578706 CYP4F11Q9HBI6 524 aa6.82□□□□□ -1.32
UBB-208ENST00000578706 DNAAF2Q9NVR5 837 aaKnown RBP6.82□□□□□ -1.32
UBB-208ENST00000578706 VPS54Q9P1Q0 977 aa6.82□□□□□ -1.32
UBB-208ENST00000578706 FBXO2Q9UK22 296 aaPredicted RBP6.82□□□□□ -1.32
UBB-208ENST00000578706 SRPRBQ9Y5M8 271 aaKnown RBP6.82□□□□□ -1.32
UBB-208ENST00000578706 KNTC1P50748 2209 aa6.82□□□□□ -1.32
UBB-208ENST00000578706 C2CD3Q4AC94 2353 aa6.82□□□□□ -1.32
UBB-208ENST00000578706 ITPR2Q14571 2701 aa6.82□□□□□ -1.32
UBB-208ENST00000578706 DENND4CQ5VZ89 1909 aa6.82□□□□□ -1.32
UBB-208ENST00000578706 AHCTF1Q8WYP5 2266 aa6.81□□□□□ -1.32
UBB-208ENST00000578706 A0A1W2PRU2 124 aa6.81□□□□□ -1.32
UBB-208ENST00000578706 FAM149AA5PLN7 773 aa6.81□□□□□ -1.32
UBB-208ENST00000578706 SMTNL1A8MU46 457 aa6.81□□□□□ -1.32
UBB-208ENST00000578706 EML1O00423 815 aa6.81□□□□□ -1.32
UBB-208ENST00000578706 CAPN9O14815 690 aa6.81□□□□□ -1.32
UBB-208ENST00000578706 B4GALT5O43286 388 aa6.81□□□□□ -1.32
UBB-208ENST00000578706 AP5Z1O43299 807 aa6.81□□□□□ -1.32
UBB-208ENST00000578706 MARCH6O60337 910 aa6.81□□□□□ -1.32
UBB-208ENST00000578706 VNN2O95498 520 aa6.81□□□□□ -1.32
UBB-208ENST00000578706 CFIP05156 583 aa6.81□□□□□ -1.32
UBB-208ENST00000578706 ITPKAP23677 461 aa6.81□□□□□ -1.32
UBB-208ENST00000578706 EIF2S3P41091 472 aaKnown RBP6.81□□□□□ -1.32
UBB-208ENST00000578706 ZNF75DP51815 510 aa6.81□□□□□ -1.32
UBB-208ENST00000578706 ARPP19P56211 112 aa6.81□□□□□ -1.32
UBB-208ENST00000578706 TPM4P67936 248 aa6.81□□□□□ -1.32
UBB-208ENST00000578706 TWF1Q12792 350 aa6.81□□□□□ -1.32
UBB-208ENST00000578706 GRSF1Q12849 480 aaKnown RBP eCLIP6.81□□□□□ -1.32
UBB-208ENST00000578706 PPP2R5CQ13362 524 aa6.81□□□□□ -1.32
UBB-208ENST00000578706 NPY5RQ15761 445 aa6.81□□□□□ -1.32
UBB-208ENST00000578706 MAPK6Q16659 721 aa6.81□□□□□ -1.32
UBB-208ENST00000578706 TMEM132AQ24JP5 1023 aa6.81□□□□□ -1.32
UBB-208ENST00000578706 ITPRIPL2Q3MIP1 535 aa6.81□□□□□ -1.32
UBB-208ENST00000578706 USP39Q53GS9 565 aaKnown RBP6.81□□□□□ -1.32
UBB-208ENST00000578706 ANO7Q6IWH7 933 aa6.81□□□□□ -1.32
UBB-208ENST00000578706 MOXD1Q6UVY6 613 aa6.81□□□□□ -1.32
UBB-208ENST00000578706 C11orf57Q6ZUT1 292 aaPredicted RBP6.81□□□□□ -1.32
UBB-208ENST00000578706 HAUS6Q7Z4H7 955 aa6.81□□□□□ -1.32
UBB-208ENST00000578706 GLRX5Q86SX6 157 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms