RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 IFT88Q13099 833 aa9.85□□□□□ -0.83
CDK5RAP3-208ENST00000578525 ZNF268Q14587 947 aaPredicted RBP9.85□□□□□ -0.83
CDK5RAP3-208ENST00000578525 KYNUQ16719 465 aa9.85□□□□□ -0.83
CDK5RAP3-208ENST00000578525 HADHQ16836 314 aaKnown RBP9.85□□□□□ -0.83
CDK5RAP3-208ENST00000578525 P3H1Q32P28 736 aa9.85□□□□□ -0.83
CDK5RAP3-208ENST00000578525 TFDP3Q5H9I0 405 aa9.85□□□□□ -0.83
CDK5RAP3-208ENST00000578525 RNF187Q5TA31 235 aaPredicted RBP9.85□□□□□ -0.83
CDK5RAP3-208ENST00000578525 GKAP1Q5VSY0 366 aaPredicted RBP9.85□□□□□ -0.83
CDK5RAP3-208ENST00000578525 JADE1Q6IE81 842 aa9.85□□□□□ -0.83
CDK5RAP3-208ENST00000578525 TAPT1Q6NXT6 567 aa9.85□□□□□ -0.83
CDK5RAP3-208ENST00000578525 CCDC121Q6ZUS5 278 aa9.85□□□□□ -0.83
CDK5RAP3-208ENST00000578525 EXOC3L1Q86VI1 746 aa9.85□□□□□ -0.83
CDK5RAP3-208ENST00000578525 CDR2LQ86X02 465 aaPredicted RBP9.85□□□□□ -0.83
CDK5RAP3-208ENST00000578525 TMEM192Q8IY95 271 aa9.85□□□□□ -0.83
CDK5RAP3-208ENST00000578525 RIBC1Q8N443 379 aaPredicted RBP9.85□□□□□ -0.83
CDK5RAP3-208ENST00000578525 SLC4A11Q8NBS3 891 aa9.85□□□□□ -0.83
CDK5RAP3-208ENST00000578525 CCDC197Q8NCU1 140 aa9.85□□□□□ -0.83
CDK5RAP3-208ENST00000578525 JOSD2Q8TAC2 188 aa9.85□□□□□ -0.83
CDK5RAP3-208ENST00000578525 P3H4Q92791 437 aa9.85□□□□□ -0.83
CDK5RAP3-208ENST00000578525 ARHGEF2Q92974 986 aaKnown RBP9.85□□□□□ -0.83
CDK5RAP3-208ENST00000578525 ZBTB10Q96DT7 871 aa9.85□□□□□ -0.83
CDK5RAP3-208ENST00000578525 TTC25Q96NG3 672 aa9.85□□□□□ -0.83
CDK5RAP3-208ENST00000578525 ZNF317Q96PQ6 595 aaPredicted RBP9.85□□□□□ -0.83
CDK5RAP3-208ENST00000578525 CCDC77Q9BR77 488 aa9.85□□□□□ -0.83
CDK5RAP3-208ENST00000578525 ELOVL4Q9GZR5 314 aa9.85□□□□□ -0.83
CDK5RAP3-208ENST00000578525 NSRP1Q9H0G5 558 aaKnown RBP9.85□□□□□ -0.83
CDK5RAP3-208ENST00000578525 RNPEPQ9H4A4 650 aa9.85□□□□□ -0.83
CDK5RAP3-208ENST00000578525 SMYD3Q9H7B4 428 aa9.85□□□□□ -0.83
CDK5RAP3-208ENST00000578525 ACTR5Q9H9F9 607 aaPredicted RBP9.85□□□□□ -0.83
CDK5RAP3-208ENST00000578525 IFT122Q9HBG6 1241 aa9.85□□□□□ -0.83
CDK5RAP3-208ENST00000578525 PCDH9Q9HC56 1237 aa9.85□□□□□ -0.83
CDK5RAP3-208ENST00000578525 DNAJC17Q9NVM6 304 aaKnown RBP9.85□□□□□ -0.83
CDK5RAP3-208ENST00000578525 DNPEPQ9ULA0 475 aa9.85□□□□□ -0.83
CDK5RAP3-208ENST00000578525 ZNF148Q9UQR1 794 aa9.85□□□□□ -0.83
CDK5RAP3-208ENST00000578525 EFR3BQ9Y2G0 817 aa9.85□□□□□ -0.83
CDK5RAP3-208ENST00000578525 PLXNB2O15031 1838 aa9.84□□□□□ -0.83
CDK5RAP3-208ENST00000578525 A0A087WZ62 844 aa9.84□□□□□ -0.83
CDK5RAP3-208ENST00000578525 C3orf70A6NLC5 250 aaPredicted RBP9.84□□□□□ -0.83
CDK5RAP3-208ENST00000578525 ERBB2P04626 1255 aa9.84□□□□□ -0.83
CDK5RAP3-208ENST00000578525 ITGB3P05106 788 aa9.84□□□□□ -0.83
CDK5RAP3-208ENST00000578525 ITGAVP06756 1048 aa9.84□□□□□ -0.83
CDK5RAP3-208ENST00000578525 IQCF3P0C7M6 154 aa9.84□□□□□ -0.83
CDK5RAP3-208ENST00000578525 VDRP11473 427 aa9.84□□□□□ -0.83
CDK5RAP3-208ENST00000578525 KRT3P12035 628 aa9.84□□□□□ -0.83
CDK5RAP3-208ENST00000578525 RFC1P35251 1148 aaPredicted RBP9.84□□□□□ -0.83
CDK5RAP3-208ENST00000578525 GJA5P36382 358 aa9.84□□□□□ -0.83
CDK5RAP3-208ENST00000578525 MAGEA4P43358 317 aa9.84□□□□□ -0.83
CDK5RAP3-208ENST00000578525 GABRB2P47870 512 aa9.84□□□□□ -0.83
CDK5RAP3-208ENST00000578525 ARSEP51690 589 aa9.84□□□□□ -0.83
CDK5RAP3-208ENST00000578525 CDH8P55286 799 aa9.84□□□□□ -0.83
CDK5RAP3-208ENST00000578525 SLC25A11Q02978 314 aaKnown RBP9.84□□□□□ -0.83
CDK5RAP3-208ENST00000578525 ITIH4Q14624 930 aa9.84□□□□□ -0.83
CDK5RAP3-208ENST00000578525 OASLQ15646 514 aaKnown RBP9.84□□□□□ -0.83
CDK5RAP3-208ENST00000578525 TAZQ16635 292 aa9.84□□□□□ -0.83
CDK5RAP3-208ENST00000578525 WDR72Q3MJ13 1102 aa9.84□□□□□ -0.83
CDK5RAP3-208ENST00000578525 CCDC38Q502W7 563 aa9.84□□□□□ -0.83
CDK5RAP3-208ENST00000578525 LDLRAD1Q5T700 205 aa9.84□□□□□ -0.83
CDK5RAP3-208ENST00000578525 C9orf131Q5VYM1 1079 aa9.84□□□□□ -0.83
CDK5RAP3-208ENST00000578525 TXNRD3NBQ6F5E7 133 aa9.84□□□□□ -0.83
CDK5RAP3-208ENST00000578525 VSTM1Q6UX27 236 aa9.84□□□□□ -0.83
CDK5RAP3-208ENST00000578525 BBS12Q6ZW61 710 aa9.84□□□□□ -0.83
CDK5RAP3-208ENST00000578525 XYLT1Q86Y38 959 aa9.84□□□□□ -0.83
CDK5RAP3-208ENST00000578525 NT5DC4Q86YG4 428 aa9.84□□□□□ -0.83
CDK5RAP3-208ENST00000578525 LRRC34Q8IZ02 419 aa9.84□□□□□ -0.83
CDK5RAP3-208ENST00000578525 TTC39CQ8N584 583 aa9.84□□□□□ -0.83
CDK5RAP3-208ENST00000578525 TTC13Q8NBP0 860 aa9.84□□□□□ -0.83
CDK5RAP3-208ENST00000578525 GPRC5AQ8NFJ5 357 aa9.84□□□□□ -0.83
CDK5RAP3-208ENST00000578525 PPTC7Q8NI37 304 aa9.84□□□□□ -0.83
CDK5RAP3-208ENST00000578525 CXorf38Q8TB03 319 aa9.84□□□□□ -0.83
CDK5RAP3-208ENST00000578525 SLC35B2Q8TB61 432 aa9.84□□□□□ -0.83
CDK5RAP3-208ENST00000578525 FBXO41Q8TF61 875 aa9.84□□□□□ -0.83
CDK5RAP3-208ENST00000578525 EMID1Q96A84 441 aaPredicted RBP9.84□□□□□ -0.83
CDK5RAP3-208ENST00000578525 MCRS1Q96EZ8 462 aa9.84□□□□□ -0.83
CDK5RAP3-208ENST00000578525 TMEM176AQ96HP8 235 aa9.84□□□□□ -0.83
CDK5RAP3-208ENST00000578525 L3MBTL3Q96JM7 780 aaPredicted RBP9.84□□□□□ -0.83
CDK5RAP3-208ENST00000578525 CABS1Q96KC9 395 aa9.84□□□□□ -0.83
CDK5RAP3-208ENST00000578525 CFAP57Q96MR6 1250 aa9.84□□□□□ -0.83
CDK5RAP3-208ENST00000578525 PWWP2AQ96N64 755 aa9.84□□□□□ -0.83
CDK5RAP3-208ENST00000578525 FDXACB1Q9BRP7 624 aaPredicted RBP9.84□□□□□ -0.83
CDK5RAP3-208ENST00000578525 FHDC1Q9C0D6 1143 aaPredicted RBP9.84□□□□□ -0.83
CDK5RAP3-208ENST00000578525 FAM124BQ9H5Z6 455 aaPredicted RBP9.84□□□□□ -0.83
CDK5RAP3-208ENST00000578525 EFCC1Q9HA90 598 aa9.84□□□□□ -0.83
CDK5RAP3-208ENST00000578525 SAYSD1Q9NPB0 183 aa9.84□□□□□ -0.83
CDK5RAP3-208ENST00000578525 METTL5Q9NRN9 209 aaKnown RBP9.84□□□□□ -0.83
CDK5RAP3-208ENST00000578525 CYTH4Q9UIA0 394 aa9.84□□□□□ -0.83
CDK5RAP3-208ENST00000578525 TPX2Q9ULW0 747 aaKnown RBP9.84□□□□□ -0.83
CDK5RAP3-208ENST00000578525 SHOC2Q9UQ13 582 aa9.84□□□□□ -0.83
CDK5RAP3-208ENST00000578525 AKT3Q9Y243 479 aa9.84□□□□□ -0.83
CDK5RAP3-208ENST00000578525 GOLGA6L7A0A1B0GV03 622 aa9.83□□□□□ -0.84
CDK5RAP3-208ENST00000578525 M0QYV0 167 aa9.83□□□□□ -0.84
CDK5RAP3-208ENST00000578525 CDH16O75309 829 aa9.83□□□□□ -0.84
CDK5RAP3-208ENST00000578525 LRCH4O75427 683 aa9.83□□□□□ -0.84
CDK5RAP3-208ENST00000578525 HMGCRP04035 888 aa9.83□□□□□ -0.84
CDK5RAP3-208ENST00000578525 GHRP10912 638 aa9.83□□□□□ -0.84
CDK5RAP3-208ENST00000578525 ARF4P18085 180 aaPredicted RBP9.83□□□□□ -0.84
CDK5RAP3-208ENST00000578525 KDELR1P24390 212 aa9.83□□□□□ -0.84
CDK5RAP3-208ENST00000578525 EPHX2P34913 555 aa9.83□□□□□ -0.84
CDK5RAP3-208ENST00000578525 RBP5P82980 135 aa9.83□□□□□ -0.84
CDK5RAP3-208ENST00000578525 ACTN3Q08043 901 aaPredicted RBP9.83□□□□□ -0.84
CDK5RAP3-208ENST00000578525 GPS1Q13098 491 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms