RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 USTQ9Y2C2 406 aa11.76□□□□□ -0.53
SKA2-204ENST00000578519 SNX9Q9Y5X1 595 aa11.76□□□□□ -0.53
SKA2-204ENST00000578519 CDY2AQ9Y6F7 541 aa11.76□□□□□ -0.53
SKA2-204ENST00000578519 SQORQ9Y6N5 450 aa11.76□□□□□ -0.53
SKA2-204ENST00000578519 KAT6AQ92794 2004 aa11.76□□□□□ -0.53
SKA2-204ENST00000578519 SMIM28A0A1B0GU29 152 aa11.75□□□□□ -0.53
SKA2-204ENST00000578519 M0QYV0 167 aa11.75□□□□□ -0.53
SKA2-204ENST00000578519 SASH3O75995 380 aa11.75□□□□□ -0.53
SKA2-204ENST00000578519 ECEL1O95672 775 aa11.75□□□□□ -0.53
SKA2-204ENST00000578519 PSMA2P25787 234 aa11.75□□□□□ -0.53
SKA2-204ENST00000578519 OAS2P29728 719 aaKnown RBP11.75□□□□□ -0.53
SKA2-204ENST00000578519 COILP38432 576 aaPredicted RBP11.75□□□□□ -0.53
SKA2-204ENST00000578519 CARSP49589 748 aaKnown RBP11.75□□□□□ -0.53
SKA2-204ENST00000578519 CALCOCO2Q13137 446 aa11.75□□□□□ -0.53
SKA2-204ENST00000578519 DCAF12L1Q5VU92 463 aa11.75□□□□□ -0.53
SKA2-204ENST00000578519 ARHGAP17Q68EM7 881 aa11.75□□□□□ -0.53
SKA2-204ENST00000578519 CCDC137Q6PK04 289 aaKnown RBP11.75□□□□□ -0.53
SKA2-204ENST00000578519 TTC13Q8NBP0 860 aa11.75□□□□□ -0.53
SKA2-204ENST00000578519 APPL2Q8NEU8 664 aa11.75□□□□□ -0.53
SKA2-204ENST00000578519 OR6B3Q8NGW1 331 aa11.75□□□□□ -0.53
SKA2-204ENST00000578519 ATL2Q8NHH9 583 aa11.75□□□□□ -0.53
SKA2-204ENST00000578519 CASKIN2Q8WXE0 1202 aa11.75□□□□□ -0.53
SKA2-204ENST00000578519 TFAP2BQ92481 460 aa11.75□□□□□ -0.53
SKA2-204ENST00000578519 SEC14L1Q92503 715 aa11.75□□□□□ -0.53
SKA2-204ENST00000578519 TRIB2Q92519 343 aa11.75□□□□□ -0.53
SKA2-204ENST00000578519 MCEEQ96PE7 176 aa11.75□□□□□ -0.53
SKA2-204ENST00000578519 UBXN6Q9BZV1 441 aa11.75□□□□□ -0.53
SKA2-204ENST00000578519 ELOVL4Q9GZR5 314 aa11.75□□□□□ -0.53
SKA2-204ENST00000578519 CDHR5Q9HBB8 845 aa11.75□□□□□ -0.53
SKA2-204ENST00000578519 NOD1Q9Y239 953 aa11.75□□□□□ -0.53
SKA2-204ENST00000578519 EFR3BQ9Y2G0 817 aa11.75□□□□□ -0.53
SKA2-204ENST00000578519 GIT1Q9Y2X7 761 aa11.75□□□□□ -0.53
SKA2-204ENST00000578519 EVPLQ92817 2033 aa11.74□□□□□ -0.53
SKA2-204ENST00000578519 A8MXQ7 604 aa11.74□□□□□ -0.53
SKA2-204ENST00000578519 KPNA7A9QM74 516 aa11.74□□□□□ -0.53
SKA2-204ENST00000578519 O00370 1275 aa11.74□□□□□ -0.53
SKA2-204ENST00000578519 PIRO00625 290 aa11.74□□□□□ -0.53
SKA2-204ENST00000578519 TTI1O43156 1089 aa11.74□□□□□ -0.53
SKA2-204ENST00000578519 CALCAP01258 141 aa11.74□□□□□ -0.53
SKA2-204ENST00000578519 LRPAP1P30533 357 aa11.74□□□□□ -0.53
SKA2-204ENST00000578519 PTPN7P35236 360 aa11.74□□□□□ -0.53
SKA2-204ENST00000578519 GNL1P36915 607 aaPredicted RBP11.74□□□□□ -0.53
SKA2-204ENST00000578519 RAP1GAPP47736 663 aa11.74□□□□□ -0.53
SKA2-204ENST00000578519 PRKCZQ05513 592 aa11.74□□□□□ -0.53
SKA2-204ENST00000578519 CACNB2Q08289 660 aaPredicted RBP11.74□□□□□ -0.53
SKA2-204ENST00000578519 PTK7Q13308 1070 aa11.74□□□□□ -0.53
SKA2-204ENST00000578519 PPP1R7Q15435 360 aa11.74□□□□□ -0.53
SKA2-204ENST00000578519 CCNG2Q16589 344 aa11.74□□□□□ -0.53
SKA2-204ENST00000578519 CYP4F22Q6NT55 531 aa11.74□□□□□ -0.53
SKA2-204ENST00000578519 CXCL17Q6UXB2 119 aa11.74□□□□□ -0.53
SKA2-204ENST00000578519 LRIG3Q6UXM1 1119 aa11.74□□□□□ -0.53
SKA2-204ENST00000578519 SERINC5Q86VE9 423 aa11.74□□□□□ -0.53
SKA2-204ENST00000578519 JAMLQ86YT9 394 aa11.74□□□□□ -0.53
SKA2-204ENST00000578519 TOP6BLQ8N6T0 577 aa11.74□□□□□ -0.53
SKA2-204ENST00000578519 TRPV1Q8NER1 839 aa11.74□□□□□ -0.53
SKA2-204ENST00000578519 SLCO2A1Q92959 643 aa11.74□□□□□ -0.53
SKA2-204ENST00000578519 MCRS1Q96EZ8 462 aa11.74□□□□□ -0.53
SKA2-204ENST00000578519 DDX27Q96GQ7 796 aaKnown RBP11.74□□□□□ -0.53
SKA2-204ENST00000578519 TSEN34Q9BSV6 310 aaKnown RBP11.74□□□□□ -0.53
SKA2-204ENST00000578519 OSBPL8Q9BZF1 889 aa11.74□□□□□ -0.53
SKA2-204ENST00000578519 SDCBP2Q9H190 292 aa11.74□□□□□ -0.53
SKA2-204ENST00000578519 NXF3Q9H4D5 531 aaKnown RBP11.74□□□□□ -0.53
SKA2-204ENST00000578519 SRRDQ9UH36 339 aa11.74□□□□□ -0.53
SKA2-204ENST00000578519 CHORDC1Q9UHD1 332 aaPredicted RBP11.74□□□□□ -0.53
SKA2-204ENST00000578519 GABRQQ9UN88 632 aa11.74□□□□□ -0.53
SKA2-204ENST00000578519 IPPQ9Y573 584 aa11.74□□□□□ -0.53
SKA2-204ENST00000578519 MOXD2PA6NHM9 499 aa11.73□□□□□ -0.53
SKA2-204ENST00000578519 BHMG1C9JSJ3 638 aaPredicted RBP11.73□□□□□ -0.53
SKA2-204ENST00000578519 GOLGA8SH3BPF8 625 aa11.73□□□□□ -0.53
SKA2-204ENST00000578519 GALR2O43603 387 aaPredicted RBP11.73□□□□□ -0.53
SKA2-204ENST00000578519 PGK1P00558 417 aa11.73□□□□□ -0.53
SKA2-204ENST00000578519 KRT1P04264 644 aa11.73□□□□□ -0.53
SKA2-204ENST00000578519 ERBB2P04626 1255 aa11.73□□□□□ -0.53
SKA2-204ENST00000578519 THP07101 528 aa11.73□□□□□ -0.53
SKA2-204ENST00000578519 ASGR1P07306 291 aa11.73□□□□□ -0.53
SKA2-204ENST00000578519 CFHP08603 1231 aa11.73□□□□□ -0.53
SKA2-204ENST00000578519 RARAP10276 462 aa11.73□□□□□ -0.53
SKA2-204ENST00000578519 ITIH2P19823 946 aa11.73□□□□□ -0.53
SKA2-204ENST00000578519 RPL9P32969 192 aaKnown RBP11.73□□□□□ -0.53
SKA2-204ENST00000578519 SCNN1AP37088 669 aa11.73□□□□□ -0.53
SKA2-204ENST00000578519 HSPA9P38646 679 aaKnown RBP11.73□□□□□ -0.53
SKA2-204ENST00000578519 GPD2P43304 727 aa11.73□□□□□ -0.53
SKA2-204ENST00000578519 EIF3BP55884 814 aaKnown RBP11.73□□□□□ -0.53
SKA2-204ENST00000578519 ZNF200P98182 395 aaPredicted RBP11.73□□□□□ -0.53
SKA2-204ENST00000578519 NFX1Q12986 1120 aaKnown RBP11.73□□□□□ -0.53
SKA2-204ENST00000578519 SLMAPQ14BN4 828 aa11.73□□□□□ -0.53
SKA2-204ENST00000578519 KCNA10Q16322 511 aa11.73□□□□□ -0.53
SKA2-204ENST00000578519 PPP1R15BQ5SWA1 713 aa11.73□□□□□ -0.53
SKA2-204ENST00000578519 UBXN11Q5T124 520 aa11.73□□□□□ -0.53
SKA2-204ENST00000578519 DUPD1Q68J44 220 aa11.73□□□□□ -0.53
SKA2-204ENST00000578519 OR6B2Q6IFH4 312 aa11.73□□□□□ -0.53
SKA2-204ENST00000578519 ZNF365Q70YC5 407 aa11.73□□□□□ -0.53
SKA2-204ENST00000578519 ADAT2Q7Z6V5 191 aaKnown RBP11.73□□□□□ -0.53
SKA2-204ENST00000578519 PHLDB2Q86SQ0 1253 aa11.73□□□□□ -0.53
SKA2-204ENST00000578519 FAM228AQ86W67 206 aa11.73□□□□□ -0.53
SKA2-204ENST00000578519 MAP7D3Q8IWC1 876 aa11.73□□□□□ -0.53
SKA2-204ENST00000578519 CRYBG2Q8N1P7 616 aa11.73□□□□□ -0.53
SKA2-204ENST00000578519 TMEM86AQ8N2M4 240 aa11.73□□□□□ -0.53
SKA2-204ENST00000578519 WDTC1Q8N5D0 677 aa11.73□□□□□ -0.53
SKA2-204ENST00000578519 PRELID2Q8N945 189 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms