RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 CDK7P50613 346 aa17.97■□□□□ 0.47
SREBF1-218ENST00000578469 NDST1P52848 882 aa17.97■□□□□ 0.47
SREBF1-218ENST00000578469 LPIN1Q14693 890 aa17.97■□□□□ 0.47
SREBF1-218ENST00000578469 SGO2Q562F6 1265 aa17.97■□□□□ 0.47
SREBF1-218ENST00000578469 RASIP1Q5U651 963 aa17.97■□□□□ 0.47
SREBF1-218ENST00000578469 MRPL10Q7Z7H8 261 aaKnown RBP17.97■□□□□ 0.47
SREBF1-218ENST00000578469 ERICH1Q86X53 443 aa17.97■□□□□ 0.47
SREBF1-218ENST00000578469 TMEM130Q8N3G9 435 aa17.97■□□□□ 0.47
SREBF1-218ENST00000578469 SLC43A3Q8NBI5 491 aa17.97■□□□□ 0.47
SREBF1-218ENST00000578469 WHAMMQ8TF30 809 aa17.97■□□□□ 0.47
SREBF1-218ENST00000578469 TFAP2BQ92481 460 aa17.97■□□□□ 0.47
SREBF1-218ENST00000578469 PGBD4Q96DM1 585 aa17.97■□□□□ 0.47
SREBF1-218ENST00000578469 HEXIM2Q96MH2 286 aaKnown RBP17.97■□□□□ 0.47
SREBF1-218ENST00000578469 TRAIPQ9BWF2 469 aa17.97■□□□□ 0.47
SREBF1-218ENST00000578469 WNT8AQ9H1J5 351 aa17.97■□□□□ 0.47
SREBF1-218ENST00000578469 TSPYL2Q9H2G4 693 aaPredicted RBP17.97■□□□□ 0.47
SREBF1-218ENST00000578469 LCMT1Q9UIC8 334 aa17.97■□□□□ 0.47
SREBF1-218ENST00000578469 PDE2AO00408 941 aaPredicted RBP17.96■□□□□ 0.47
SREBF1-218ENST00000578469 CEP104O60308 925 aa17.96■□□□□ 0.47
SREBF1-218ENST00000578469 ZNF623O75123 536 aa17.96■□□□□ 0.47
SREBF1-218ENST00000578469 LRPAP1P30533 357 aa17.96■□□□□ 0.47
SREBF1-218ENST00000578469 PBX2P40425 430 aa17.96■□□□□ 0.47
SREBF1-218ENST00000578469 MRPS5P82675 430 aaKnown RBP17.96■□□□□ 0.47
SREBF1-218ENST00000578469 CLUL1Q15846 466 aa17.96■□□□□ 0.47
SREBF1-218ENST00000578469 CNGA2Q16280 664 aa17.96■□□□□ 0.47
SREBF1-218ENST00000578469 ZNF618Q5T7W0 954 aa17.96■□□□□ 0.47
SREBF1-218ENST00000578469 MMS22LQ6ZRQ5 1243 aa17.96■□□□□ 0.47
SREBF1-218ENST00000578469 ZNF365Q70YC5 407 aa17.96■□□□□ 0.47
SREBF1-218ENST00000578469 UNC93AQ86WB7 457 aa17.96■□□□□ 0.47
SREBF1-218ENST00000578469 FAM126BQ8IXS8 530 aa17.96■□□□□ 0.47
SREBF1-218ENST00000578469 C1orf131Q8NDD1 294 aaKnown RBP17.96■□□□□ 0.47
SREBF1-218ENST00000578469 ASB2Q96Q27 587 aa17.96■□□□□ 0.47
SREBF1-218ENST00000578469 IL23AQ9NPF7 189 aa17.96■□□□□ 0.47
SREBF1-218ENST00000578469 UBN1Q9NPG3 1134 aa17.96■□□□□ 0.47
SREBF1-218ENST00000578469 PARVAQ9NVD7 372 aa17.96■□□□□ 0.47
SREBF1-218ENST00000578469 ANAPC7Q9UJX3 599 aa17.96■□□□□ 0.47
SREBF1-218ENST00000578469 STRIP2Q9ULQ0 834 aa17.96■□□□□ 0.47
SREBF1-218ENST00000578469 GRXCR1A8MXD5 290 aa17.95■□□□□ 0.46
SREBF1-218ENST00000578469 KPNA7A9QM74 516 aa17.95■□□□□ 0.46
SREBF1-218ENST00000578469 MYO1FO00160 1098 aa17.95■□□□□ 0.46
SREBF1-218ENST00000578469 SPOPO43791 374 aa17.95■□□□□ 0.46
SREBF1-218ENST00000578469 ACRP10323 421 aa17.95■□□□□ 0.46
SREBF1-218ENST00000578469 CKBP12277 381 aa17.95■□□□□ 0.46
SREBF1-218ENST00000578469 IGFBP4P22692 258 aa17.95■□□□□ 0.46
SREBF1-218ENST00000578469 SLC1A1P43005 524 aa17.95■□□□□ 0.46
SREBF1-218ENST00000578469 TAP1Q03518 808 aa17.95■□□□□ 0.46
SREBF1-218ENST00000578469 DSC3Q14574 896 aa17.95■□□□□ 0.46
SREBF1-218ENST00000578469 PTPROQ16827 1216 aa17.95■□□□□ 0.46
SREBF1-218ENST00000578469 PLEKHA7Q6IQ23 1121 aa17.95■□□□□ 0.46
SREBF1-218ENST00000578469 DENND1BQ6P3S1 775 aa17.95■□□□□ 0.46
SREBF1-218ENST00000578469 MMGT1Q8N4V1 131 aa17.95■□□□□ 0.46
SREBF1-218ENST00000578469 SPATA4Q8NEY3 305 aa17.95■□□□□ 0.46
SREBF1-218ENST00000578469 ACTRT1Q8TDG2 376 aa17.95■□□□□ 0.46
SREBF1-218ENST00000578469 ADAMTS19Q8TE59 1207 aa17.95■□□□□ 0.46
SREBF1-218ENST00000578469 PPP1R10Q96QC0 940 aaKnown RBP17.95■□□□□ 0.46
SREBF1-218ENST00000578469 TWNKQ96RR1 684 aa17.95■□□□□ 0.46
SREBF1-218ENST00000578469 ZSWIM1Q9BR11 485 aa17.95■□□□□ 0.46
SREBF1-218ENST00000578469 TRPV6Q9H1D0 765 aa17.95■□□□□ 0.46
SREBF1-218ENST00000578469 SLC28A3Q9HAS3 691 aa17.95■□□□□ 0.46
SREBF1-218ENST00000578469 GDAP2Q9NXN4 497 aa17.95■□□□□ 0.46
SREBF1-218ENST00000578469 CHORDC1Q9UHD1 332 aaPredicted RBP17.95■□□□□ 0.46
SREBF1-218ENST00000578469 PTGESO14684 152 aa17.94■□□□□ 0.46
SREBF1-218ENST00000578469 PPEF2O14830 753 aa17.94■□□□□ 0.46
SREBF1-218ENST00000578469 DDX3YO15523 660 aaKnown RBP17.94■□□□□ 0.46
SREBF1-218ENST00000578469 HUS1O60921 280 aa17.94■□□□□ 0.46
SREBF1-218ENST00000578469 THP07101 528 aa17.94■□□□□ 0.46
SREBF1-218ENST00000578469 FAM163BP0C2L3 166 aa17.94■□□□□ 0.46
SREBF1-218ENST00000578469 COMTP21964 271 aa17.94■□□□□ 0.46
SREBF1-218ENST00000578469 PTP4A2Q12974 167 aa17.94■□□□□ 0.46
SREBF1-218ENST00000578469 C16orf59Q7L2K0 433 aa17.94■□□□□ 0.46
SREBF1-218ENST00000578469 DPH6Q7L8W6 267 aa17.94■□□□□ 0.46
SREBF1-218ENST00000578469 MTERF4Q7Z6M4 381 aaKnown RBP17.94■□□□□ 0.46
SREBF1-218ENST00000578469 NOA1Q8NC60 698 aaKnown RBP17.94■□□□□ 0.46
SREBF1-218ENST00000578469 FEZF2Q8TBJ5 459 aa17.94■□□□□ 0.46
SREBF1-218ENST00000578469 HERVK_113Q902F9 699 aa17.94■□□□□ 0.46
SREBF1-218ENST00000578469 MS4A14Q96JA4 679 aa17.94■□□□□ 0.46
SREBF1-218ENST00000578469 UHRF1Q96T88 793 aaPredicted RBP17.94■□□□□ 0.46
SREBF1-218ENST00000578469 GAD1Q99259 594 aa17.94■□□□□ 0.46
SREBF1-218ENST00000578469 NAP1L3Q99457 506 aaPredicted RBP17.94■□□□□ 0.46
SREBF1-218ENST00000578469 MRPL45Q9BRJ2 306 aaKnown RBP17.94■□□□□ 0.46
SREBF1-218ENST00000578469 CARD9Q9H257 536 aa17.94■□□□□ 0.46
SREBF1-218ENST00000578469 SNX25Q9H3E2 840 aa17.94■□□□□ 0.46
SREBF1-218ENST00000578469 HIPK3Q9H422 1215 aa17.94■□□□□ 0.46
SREBF1-218ENST00000578469 RNF19AQ9NV58 838 aa17.94■□□□□ 0.46
SREBF1-218ENST00000578469 HMGXB4Q9UGU5 601 aa17.94■□□□□ 0.46
SREBF1-218ENST00000578469 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.94■□□□□ 0.46
SREBF1-218ENST00000578469 PDCD11Q14690 1871 aaKnown RBP17.93■□□□□ 0.46
SREBF1-218ENST00000578469 A0A0U1RQF3 1178 aa17.93■□□□□ 0.46
SREBF1-218ENST00000578469 CCDC66A2RUB6 948 aa17.93■□□□□ 0.46
SREBF1-218ENST00000578469 PGRMC1O00264 195 aaKnown RBP17.93■□□□□ 0.46
SREBF1-218ENST00000578469 MICAL2O94851 1124 aa17.93■□□□□ 0.46
SREBF1-218ENST00000578469 FGBP02675 491 aa17.93■□□□□ 0.46
SREBF1-218ENST00000578469 RHOXF2BP0C7M4 288 aa17.93■□□□□ 0.46
SREBF1-218ENST00000578469 MCM3P25205 808 aa17.93■□□□□ 0.46
SREBF1-218ENST00000578469 CTNNA2P26232 953 aa17.93■□□□□ 0.46
SREBF1-218ENST00000578469 CYP2C18P33260 490 aa17.93■□□□□ 0.46
SREBF1-218ENST00000578469 MLH1P40692 756 aa17.93■□□□□ 0.46
SREBF1-218ENST00000578469 C2orf54Q08AI8 447 aa17.93■□□□□ 0.46
SREBF1-218ENST00000578469 ORC1Q13415 861 aa17.93■□□□□ 0.46
SREBF1-218ENST00000578469 DNAJC24Q6P3W2 148 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms