RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 PCDHB18PQ96TA0 734 aa14.25□□□□□ -0.13
SRSF1-202ENST00000578430 AAASQ9NRG9 546 aa14.25□□□□□ -0.13
SRSF1-202ENST00000578430 MARCH5Q9NX47 278 aa14.25□□□□□ -0.13
SRSF1-202ENST00000578430 DDX43Q9NXZ2 648 aaKnown RBP14.25□□□□□ -0.13
SRSF1-202ENST00000578430 ZMYND8Q9ULU4 1186 aaPredicted RBP14.25□□□□□ -0.13
SRSF1-202ENST00000578430 COL4A6Q14031 1691 aa14.24□□□□□ -0.13
SRSF1-202ENST00000578430 A0A0A6YYK5 440 aaPredicted RBP14.24□□□□□ -0.13
SRSF1-202ENST00000578430 A0A1W2PPC1 479 aa14.24□□□□□ -0.13
SRSF1-202ENST00000578430 KIF2AO00139 706 aaPredicted RBP14.24□□□□□ -0.13
SRSF1-202ENST00000578430 OAZ2O95190 189 aa14.24□□□□□ -0.13
SRSF1-202ENST00000578430 FTLP02792 175 aaPredicted RBP14.24□□□□□ -0.13
SRSF1-202ENST00000578430 ITGB1P05556 798 aa14.24□□□□□ -0.13
SRSF1-202ENST00000578430 PDGFRBP09619 1106 aa14.24□□□□□ -0.13
SRSF1-202ENST00000578430 TMEM253P0C7T8 217 aa14.24□□□□□ -0.13
SRSF1-202ENST00000578430 SETSIPP0DME0 302 aa14.24□□□□□ -0.13
SRSF1-202ENST00000578430 MYBL1P10243 752 aa14.24□□□□□ -0.13
SRSF1-202ENST00000578430 PTPN1P18031 435 aaKnown RBP14.24□□□□□ -0.13
SRSF1-202ENST00000578430 IGFBP6P24592 240 aaPredicted RBP14.24□□□□□ -0.13
SRSF1-202ENST00000578430 LMO2P25791 158 aa14.24□□□□□ -0.13
SRSF1-202ENST00000578430 PPM1AP35813 382 aa14.24□□□□□ -0.13
SRSF1-202ENST00000578430 NSFP46459 744 aaKnown RBP14.24□□□□□ -0.13
SRSF1-202ENST00000578430 NOMO3P69849 1222 aa14.24□□□□□ -0.13
SRSF1-202ENST00000578430 YWHAHQ04917 246 aaPredicted RBP14.24□□□□□ -0.13
SRSF1-202ENST00000578430 MAPRE1Q15691 268 aaKnown RBP14.24□□□□□ -0.13
SRSF1-202ENST00000578430 FUT10Q6P4F1 479 aa14.24□□□□□ -0.13
SRSF1-202ENST00000578430 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.24□□□□□ -0.13
SRSF1-202ENST00000578430 MSANTD4Q8NCY6 345 aa14.24□□□□□ -0.13
SRSF1-202ENST00000578430 HASPINQ8TF76 798 aa14.24□□□□□ -0.13
SRSF1-202ENST00000578430 CTNNBL1Q8WYA6 563 aaPredicted RBP14.24□□□□□ -0.13
SRSF1-202ENST00000578430 CYFIP2Q96F07 1278 aa14.24□□□□□ -0.13
SRSF1-202ENST00000578430 NOX5Q96PH1 765 aa14.24□□□□□ -0.13
SRSF1-202ENST00000578430 RAD9AQ99638 391 aa14.24□□□□□ -0.13
SRSF1-202ENST00000578430 SYT15Q9BQS2 421 aa14.24□□□□□ -0.13
SRSF1-202ENST00000578430 ZSWIM1Q9BR11 485 aa14.24□□□□□ -0.13
SRSF1-202ENST00000578430 MYO1AQ9UBC5 1043 aa14.24□□□□□ -0.13
SRSF1-202ENST00000578430 HESX1Q9UBX0 185 aa14.24□□□□□ -0.13
SRSF1-202ENST00000578430 NME7Q9Y5B8 376 aa14.24□□□□□ -0.13
SRSF1-202ENST00000578430 A0A0C4DFX4 3053 aa14.24□□□□□ -0.13
SRSF1-202ENST00000578430 USP27XA6NNY8 438 aa14.23□□□□□ -0.13
SRSF1-202ENST00000578430 I3L4J1 428 aa14.23□□□□□ -0.13
SRSF1-202ENST00000578430 MICAL2O94851 1124 aa14.23□□□□□ -0.13
SRSF1-202ENST00000578430 CALCAP01258 141 aa14.23□□□□□ -0.13
SRSF1-202ENST00000578430 FGFR3P22607 806 aa14.23□□□□□ -0.13
SRSF1-202ENST00000578430 ARHGAP25P42331 645 aa14.23□□□□□ -0.13
SRSF1-202ENST00000578430 GALCP54803 685 aa14.23□□□□□ -0.13
SRSF1-202ENST00000578430 TSPY1Q01534 308 aa14.23□□□□□ -0.13
SRSF1-202ENST00000578430 MRPL58Q14197 206 aaKnown RBP14.23□□□□□ -0.13
SRSF1-202ENST00000578430 IFI16Q16666 785 aaKnown RBP14.23□□□□□ -0.13
SRSF1-202ENST00000578430 SPOUT1Q5T280 376 aaKnown RBP14.23□□□□□ -0.13
SRSF1-202ENST00000578430 RASIP1Q5U651 963 aa14.23□□□□□ -0.13
SRSF1-202ENST00000578430 NAA35Q5VZE5 725 aa14.23□□□□□ -0.13
SRSF1-202ENST00000578430 KCNT2Q6UVM3 1135 aa14.23□□□□□ -0.13
SRSF1-202ENST00000578430 PALB2Q86YC2 1186 aa14.23□□□□□ -0.13
SRSF1-202ENST00000578430 PHF13Q86YI8 300 aaPredicted RBP14.23□□□□□ -0.13
SRSF1-202ENST00000578430 HERC6Q8IVU3 1022 aa14.23□□□□□ -0.13
SRSF1-202ENST00000578430 C17orf53Q8N3J3 647 aaPredicted RBP14.23□□□□□ -0.13
SRSF1-202ENST00000578430 FIBCD1Q8N539 461 aa14.23□□□□□ -0.13
SRSF1-202ENST00000578430 RNF10Q8N5U6 811 aaKnown RBP14.23□□□□□ -0.13
SRSF1-202ENST00000578430 IGSF21Q96ID5 467 aa14.23□□□□□ -0.13
SRSF1-202ENST00000578430 HNRNPABQ99729 332 aaKnown RBP14.23□□□□□ -0.13
SRSF1-202ENST00000578430 ZBED2Q9BTP6 218 aa14.23□□□□□ -0.13
SRSF1-202ENST00000578430 MIS12Q9H081 205 aa14.23□□□□□ -0.13
SRSF1-202ENST00000578430 TIMM13Q9Y5L4 95 aaPredicted RBP14.23□□□□□ -0.13
SRSF1-202ENST00000578430 RCCD1A6NED2 376 aa14.22□□□□□ -0.13
SRSF1-202ENST00000578430 OR6C75A6NL08 312 aa14.22□□□□□ -0.13
SRSF1-202ENST00000578430 F8W810 466 aa14.22□□□□□ -0.13
SRSF1-202ENST00000578430 H7C4K7 107 aa14.22□□□□□ -0.13
SRSF1-202ENST00000578430 M0QYV0 167 aa14.22□□□□□ -0.13
SRSF1-202ENST00000578430 DLL1O00548 723 aa14.22□□□□□ -0.13
SRSF1-202ENST00000578430 EFEMP2O95967 443 aa14.22□□□□□ -0.13
SRSF1-202ENST00000578430 ATP2A2P16615 1042 aaKnown RBP14.22□□□□□ -0.13
SRSF1-202ENST00000578430 BCAT1P54687 386 aa14.22□□□□□ -0.13
SRSF1-202ENST00000578430 SLC8A3P57103 927 aa14.22□□□□□ -0.13
SRSF1-202ENST00000578430 SNX16P57768 344 aa14.22□□□□□ -0.13
SRSF1-202ENST00000578430 GPC5P78333 572 aa14.22□□□□□ -0.13
SRSF1-202ENST00000578430 ORC1Q13415 861 aa14.22□□□□□ -0.13
SRSF1-202ENST00000578430 TCEAL1Q15170 157 aa14.22□□□□□ -0.13
SRSF1-202ENST00000578430 PTPN14Q15678 1187 aa14.22□□□□□ -0.13
SRSF1-202ENST00000578430 GOLGA7BQ2TAP0 167 aa14.22□□□□□ -0.13
SRSF1-202ENST00000578430 INTS6LQ5JSJ4 861 aaKnown RBP14.22□□□□□ -0.13
SRSF1-202ENST00000578430 PPP1R26Q5T8A7 1209 aaPredicted RBP14.22□□□□□ -0.13
SRSF1-202ENST00000578430 LIN9Q5TKA1 542 aa14.22□□□□□ -0.13
SRSF1-202ENST00000578430 FAM171A1Q5VUB5 890 aa14.22□□□□□ -0.13
SRSF1-202ENST00000578430 FAM117BQ6P1L5 589 aa14.22□□□□□ -0.13
SRSF1-202ENST00000578430 DENND1BQ6P3S1 775 aa14.22□□□□□ -0.13
SRSF1-202ENST00000578430 FAM171BQ6P995 826 aa14.22□□□□□ -0.13
SRSF1-202ENST00000578430 ANKS3Q6ZW76 656 aa14.22□□□□□ -0.13
SRSF1-202ENST00000578430 RHOT2Q8IXI1 618 aa14.22□□□□□ -0.13
SRSF1-202ENST00000578430 SLC39A11Q8N1S5 342 aa14.22□□□□□ -0.13
SRSF1-202ENST00000578430 ANKRD52Q8NB46 1076 aa14.22□□□□□ -0.13
SRSF1-202ENST00000578430 COLGALT1Q8NBJ5 622 aa14.22□□□□□ -0.13
SRSF1-202ENST00000578430 MYCBPAPQ8TBZ2 947 aa14.22□□□□□ -0.13
SRSF1-202ENST00000578430 STK32AQ8WU08 396 aa14.22□□□□□ -0.13
SRSF1-202ENST00000578430 LACRTQ9GZZ8 138 aa14.22□□□□□ -0.13
SRSF1-202ENST00000578430 DPEP3Q9H4B8 488 aa14.22□□□□□ -0.13
SRSF1-202ENST00000578430 LZTFL1Q9NQ48 299 aa14.22□□□□□ -0.13
SRSF1-202ENST00000578430 CYLDQ9NQC7 956 aa14.22□□□□□ -0.13
SRSF1-202ENST00000578430 AVENQ9NQS1 362 aaPredicted RBP14.22□□□□□ -0.13
SRSF1-202ENST00000578430 TAS2R14Q9NYV8 317 aa14.22□□□□□ -0.13
SRSF1-202ENST00000578430 SPG21Q9NZD8 308 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms